Basic Information

Insect: Bombyx mori
Gene Symbol: Zbtb41
Assembly: GCA_027497135.1
Location: CP114963.1:17641171-17646995[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 3e-05 0.0017 18.7 0.6 2 21 158 177 157 178 0.93

2 21 1.2 69 4.2 2.0 1 23 211 234 211 234 0.92

3 21 0.014 0.76 10.4 1.0 2 23 280 302 279 302 0.94

4 21 0.0063 0.35 11.4 0.6 1 23 335 357 335 357 0.98

5 21 0.0051 0.28 11.7 0.8 1 23 363 386 363 386 0.96

6 21 0.0038 0.21 12.1 1.5 1 23 395 418 395 419 0.94

7 21 5.6e-05 0.0031 17.9 0.4 3 21 535 553 533 554 0.95

8 21 3.2e-05 0.0018 18.7 2.3 1 23 585 607 585 607 0.97

9 21 0.0003 0.017 15.6 5.3 1 23 611 633 611 633 0.96

10 21 1.5 83 4.0 0.5 6 21 640 655 639 656 0.92

11 21 0.056 3.1 8.4 1.1 1 23 666 689 666 689 0.90

12 21 1.9e-06 0.00011 22.5 1.2 1 23 695 717 695 717 0.98

13 21 0.093 5.2 7.8 3.9 1 23 724 746 724 746 0.98

14 21 0.00097 0.054 14.0 1.2 2 21 855 874 854 875 0.93

15 21 0.056 3.1 8.5 1.1 3 23 908 929 907 929 0.95

16 21 3e-05 0.0017 18.7 0.4 1 23 934 956 934 956 0.97

17 21 0.1 5.6 7.7 6.2 1 21 959 979 959 980 0.95

18 21 0.0037 0.21 12.2 0.4 1 23 992 1015 992 1015 0.94

19 21 1.7e-05 0.00097 19.5 1.3 1 23 1021 1043 1021 1043 0.99

20 21 0.2 11 6.7 1.5 1 23 1077 1100 1077 1100 0.94

21 21 0.01 0.57 10.8 0.6 1 23 1108 1131 1108 1131 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	3e-05	0.0017	18.7	0.6	2	21	158	177	157	178	0.93
2	21	1.2	69	4.2	2.0	1	23	211	234	211	234	0.92
3	21	0.014	0.76	10.4	1.0	2	23	280	302	279	302	0.94
4	21	0.0063	0.35	11.4	0.6	1	23	335	357	335	357	0.98
5	21	0.0051	0.28	11.7	0.8	1	23	363	386	363	386	0.96
6	21	0.0038	0.21	12.1	1.5	1	23	395	418	395	419	0.94
7	21	5.6e-05	0.0031	17.9	0.4	3	21	535	553	533	554	0.95
8	21	3.2e-05	0.0018	18.7	2.3	1	23	585	607	585	607	0.97
9	21	0.0003	0.017	15.6	5.3	1	23	611	633	611	633	0.96
10	21	1.5	83	4.0	0.5	6	21	640	655	639	656	0.92
11	21	0.056	3.1	8.4	1.1	1	23	666	689	666	689	0.90
12	21	1.9e-06	0.00011	22.5	1.2	1	23	695	717	695	717	0.98
13	21	0.093	5.2	7.8	3.9	1	23	724	746	724	746	0.98
14	21	0.00097	0.054	14.0	1.2	2	21	855	874	854	875	0.93
15	21	0.056	3.1	8.5	1.1	3	23	908	929	907	929	0.95
16	21	3e-05	0.0017	18.7	0.4	1	23	934	956	934	956	0.97
17	21	0.1	5.6	7.7	6.2	1	21	959	979	959	980	0.95
18	21	0.0037	0.21	12.2	0.4	1	23	992	1015	992	1015	0.94
19	21	1.7e-05	0.00097	19.5	1.3	1	23	1021	1043	1021	1043	0.99
20	21	0.2	11	6.7	1.5	1	23	1077	1100	1077	1100	0.94
21	21	0.01	0.57	10.8	0.6	1	23	1108	1131	1108	1131	0.95

Sequence Information

Coding Sequence: ATGACAAGACAAGTGGACGTGAAAGCATTAATTTCCCATCTAGTCAGAGGGGATGGCGCCGAAAAATGTCGTATTTGTATGGGTGAAACAACAGAGGGCCAAGTTTACCTAGGAGATACTGTAATGGTGGACGGAGAGAAGCCCGTGACCTTAGCTGAACTATTAGAACAAATCACGGGAGTCGAGGTAACAGTGGAAGATAACCTGCCCGACGTTCTATGCTCGGCCTGCTCATTCTCAGCATTATCCGCAGCAGAGTTCAGAAACTTCTGCCAGAAAGCCATAGAGCAATGGCATAACACAGTAAAATTACTGGAGGAGGTCACCACCTTGCATCCTGTAAACGCATCCAAAATTTATGCTGTCGTATCTGACAACGAAATATCCATCACCGAAGACTCATTAAGACAAAATAAAACAATCAAACATTCGCCTATTAAAAGTAAAGAATATGGTAAAAGCTTACAATGCTCATGTCCGAACTGTGGGAAGACATTTTCATATGCATCAGATTTGTATGATCATTTGAAAGGATCGACGGACTTGACTCGGGCTTGCTATGTGTGCGCAAGGATAATGTCTGAAGATGATCTGGTGGAGCATCTAAGAGAAAAACACAATAAAAAGCCATTCAACTGTAACAAATGTGCTGTTCTGCTCCGCTCATACAAACATTACAAGAAGCACATGGCAGACGCTCACAGGCCCGGTGTGTGCTGTGAGTTGAGCCGGGAAAGCCGGGAAATACATCAAACGAAGAATAAACTATCGGTTTTGGTTAAGAGTGATCAGAGGTCAGTCAAAGTTGGTCTCCGGGGCAGTAGGAACACTGAATGTATATGTGACTATTGTCAGAAGAGGTTTGCCGGAAAGAAATTTGTAGCGACTCACATTCAGATTGTGCATATGAAATCCACTCACCGCCCCTGCGTGTATTGTGGAAAATACCTCGCTGCTGCTCACATACCAGTCCACTTGAAGAGGCATGAAACATTGGAGACCTTCAAATGTGAACTATGCAATATTGTACTAAAATCGAAACTAGGCTATCAACAACATCTAAGACTACACTCCGGAGAGAAACCTTATGTGTGTAAATACTGCGATGAAAGATTCTCTGCTTCGTCAAGGCGGTCCGAGCATGTCCGCAAGGCACACAGACAGAGTGATACGGTCTTGAGACACTCATGTGCCGTCTGTCCTGCTAAGTTCAGGCTACCCTACCAGCTCAGGAAGCATGTTTCCTCCGTACATCACATAGACAAACCAGGGTCCTTTGATTGTGAAATTTGCAAAGTGGAGAATTCAACTCTATTACCAAACAAAATATGCAAGCACTGTAAAAGTAGTTTACACGATCTTACGCTCTTCTTAAAATTATGCATAGACTCATTCAAACGTTGGAGCACAACGGCCAATTATTTGGCCAACATTGGGCTCGAGAAAAACGCGGCTACTCTCTACGTTGTAGCCGCAAACGATTTTCGAACTTACCGCAGCAAGAGAAAGATTGAAAATCACTCGCAACTTGTAAAAGATTTGGGAGCCAAAATCAGTACGCGGTCGGCACGCATGAAAGGTCCAGAACGTTCCAGAATGGCTTGTCCCGAATGCGGGAAGTGTTTTAAGAACGCGGTGCGGTTTAATGCTCACATTAGGAATTTGAAAATAAAGTATTGCACGCAGTGCGGACGTTTAATGAACTTGAATTCTTACGGAGCTCACGCTGAAAATGATCACAACGCGAGGGTGTTCCGATGTAAGAAATGCCCGGAGGTGTTCGCGAGGTATTCGTATTTGGAAAAACACAAAACCAAGCACATCGGTGTACATTGCTGCGTAGAATGCAAACGTAGCTTTCGCAACGCAACGAGTCTGTGGACGCACTTACGGAAACACCGACCGGCGGTGTGTGCCTGCGGTAAAAAGTTCACGAACGGAATATGTTTTAGGAAACACGGAAAAACGTGCGTAAGTAACAGGGGCGCCGTTCGATACGTCTGCGACTATTGCTCGAAAGAATACAGCGTCAGGACTACCCTCAAATTTCACATATTCAATGCGCACATGTCGCTAAAGAAATTCCAGTGCGATAAATGCGGAAAGGTTTTCGGTAATCGTTCTCACCTGGAGGAACATGGTAATTCTCACAACAGAGTCGCAGATAGATTCGTGTGCGTCCACTGCGACGCGAAGTTTAGCACGAGACGAGGCCACGAGAGGCACGCGAGGAAACACGATGTGGCGGACGAAGACGCCCTTCCACCCGGGGTCTGCAGGCATTGCTCCGAGGATACCATGGCCGCTTACAACTTCAGACAGCTGTGTGATACATCGAAAAAGCGTTGGTCCAGTGCCGCGGAGCTTCTATCGCGGATTCACGCGAACGCCGACAGTGGAACTCTCTTTTTCCTATACGACGACGCTATCTTGCTCCTGAAGGACAAAATTAGCACCACAGATACAAGAGCGGCCTCAGAATTGCTGAACTCGAAGTTTGACGAGGAAACAGAGCAGAAACCGCGCAAATACCAAAGATCGTATCAGCCGCCTCTAGAATGTTCTTGTCCCGAGTGCGGCAAGACCTTCCAGAACGTTCAGTATTTGAACTATCATTTGAAGAGTTCGTTGAATTGCGCGTGTAGAACCTGCGCTTTGGTCATGCAGAAGAGATTCATTCCGGAGCACATGAGGGTCGAGCATGGCGTCTCCGTGGCTCACTGTCGGATGTGTTATGCGGTTTTCGAAGACCAAGAGTCAGTTAAGCGTCACTTGCTATCGTCTCACGGCCCTAATTCGTTCTCTTGCAATACGTGCGGCACCGGCTTCAGCGGCCAGAGAGCCTTGCGCGCTCACATGTACTCGCACACGTTGTTCGACTGTAAGTCCTGCTCCAGGACATTTGAGAATCGTAAATGCTTCAAGCATCACCAGAGAGGATGCAAACGCGAGGTCTCGCCAATCGAATCCACGTTCATATGCGACTATTGTAAAATAGAATATAACAAAAAACCATCTCTGAAAGTGCACATAATACAGAAACATTTGAACGTGTTGCCGTATGTTTGTCAGAAGTGCGGGAAGCGGGCGTCGACCGTCGCGCATTTGCAGTCGCACCTCAGGACCCATAACCACGTGAGGAAGGTGTTTGAGTGTCACTGCGGTGCTAAAATGACCACGGAATTGGGTTATCGGCTCCACCAGAGGATACACTCTGGCGAGAAGCCCTACGAGTGCAAGAGGTGCGGCGAAAGGTTTTTGTCGTCTTCGAGGCGCTTAGACCACATCAAGAGGCGACACATGGGCACCCAGAACATGCCGCACGCGTGCGACAAGTGCCCCGCGAGATTTCTAAGACCCTGGGAACTGAAAAAGCATTACTCAACGATACATTTCGATTTTATTCAGATACCAGACAAAGCACAGGACGTGCCTATAAAGCGACGTTTCAAAAATAAAATATTGGACTAA
Protein Sequence: MTRQVDVKALISHLVRGDGAEKCRICMGETTEGQVYLGDTVMVDGEKPVTLAELLEQITGVEVTVEDNLPDVLCSACSFSALSAAEFRNFCQKAIEQWHNTVKLLEEVTTLHPVNASKIYAVVSDNEISITEDSLRQNKTIKHSPIKSKEYGKSLQCSCPNCGKTFSYASDLYDHLKGSTDLTRACYVCARIMSEDDLVEHLREKHNKKPFNCNKCAVLLRSYKHYKKHMADAHRPGVCCELSRESREIHQTKNKLSVLVKSDQRSVKVGLRGSRNTECICDYCQKRFAGKKFVATHIQIVHMKSTHRPCVYCGKYLAAAHIPVHLKRHETLETFKCELCNIVLKSKLGYQQHLRLHSGEKPYVCKYCDERFSASSRRSEHVRKAHRQSDTVLRHSCAVCPAKFRLPYQLRKHVSSVHHIDKPGSFDCEICKVENSTLLPNKICKHCKSSLHDLTLFLKLCIDSFKRWSTTANYLANIGLEKNAATLYVVAANDFRTYRSKRKIENHSQLVKDLGAKISTRSARMKGPERSRMACPECGKCFKNAVRFNAHIRNLKIKYCTQCGRLMNLNSYGAHAENDHNARVFRCKKCPEVFARYSYLEKHKTKHIGVHCCVECKRSFRNATSLWTHLRKHRPAVCACGKKFTNGICFRKHGKTCVSNRGAVRYVCDYCSKEYSVRTTLKFHIFNAHMSLKKFQCDKCGKVFGNRSHLEEHGNSHNRVADRFVCVHCDAKFSTRRGHERHARKHDVADEDALPPGVCRHCSEDTMAAYNFRQLCDTSKKRWSSAAELLSRIHANADSGTLFFLYDDAILLLKDKISTTDTRAASELLNSKFDEETEQKPRKYQRSYQPPLECSCPECGKTFQNVQYLNYHLKSSLNCACRTCALVMQKRFIPEHMRVEHGVSVAHCRMCYAVFEDQESVKRHLLSSHGPNSFSCNTCGTGFSGQRALRAHMYSHTLFDCKSCSRTFENRKCFKHHQRGCKREVSPIESTFICDYCKIEYNKKPSLKVHIIQKHLNVLPYVCQKCGKRASTVAHLQSHLRTHNHVRKVFECHCGAKMTTELGYRLHQRIHSGEKPYECKRCGERFLSSSRRLDHIKRRHMGTQNMPHACDKCPARFLRPWELKKHYSTIHFDFIQIPDKAQDVPIKRRFKNKILD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -