Bmor012402.1
Basic Information
- Insect
- Bombyx mori
- Gene Symbol
- ZNF131
- Assembly
- GCA_027497135.1
- Location
- CP114943.1:429051-430649[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.058 3.2 8.4 0.4 3 23 137 157 136 157 0.96 2 13 0.0034 0.19 12.3 5.0 1 23 163 186 163 186 0.95 3 13 0.031 1.7 9.3 0.0 2 23 208 229 207 229 0.94 4 13 5.9e-06 0.00033 21.0 2.8 1 23 235 258 235 258 0.98 5 13 3.7e-05 0.0021 18.4 0.2 1 23 265 287 265 287 0.98 6 13 2.7e-05 0.0015 18.9 4.4 1 23 293 315 293 315 0.99 7 13 9.7e-05 0.0054 17.1 3.7 1 23 321 343 321 343 0.97 8 13 0.0043 0.24 11.9 5.3 1 23 349 371 349 371 0.96 9 13 1.1e-05 0.00059 20.2 1.0 1 23 377 400 377 400 0.96 10 13 1.9 1.1e+02 3.6 0.3 3 23 407 424 405 424 0.78 11 13 0.037 2 9.0 1.6 1 23 430 453 430 453 0.89 12 13 0.0083 0.46 11.1 0.4 1 23 459 484 459 484 0.96 13 13 4e-06 0.00022 21.5 3.6 1 23 490 513 490 513 0.95
Sequence Information
- Coding Sequence
- ATGGAGTCCAAAATATGTCGTTTATGTCTCATTCAACCAGGAAATATTAATTTGTTCGAAACACACGAAGATAATGTGCAATATTGTAAGAAAATTATGCATTGTGCGAACATCCACATCGCAGAGGACGACGGCCTGCCTGATTTCATGTGCGAAGAATGCCTAGTTAAACTTTCTGTTGCCTTCGATTTCATCACCAAATGCCAAGCCTCTGACAAGGCTTTACGTTCAGTATCTTTGAATTATAAACCAGAAAAGAACGACGTCAAATCCGAATACATTGAAATTAAAGAGGAACCTGAAATCAAGTCTGAAACTGAATTCTTAGACGGTGATGATCATCAGTATGAAGATTTACAAGGTAAACCCAGAAAATCATCTAGAACAAAGAGTAGGGGGCCAAGAATCTGTGCAATATGCGGTTACAGGGCTGCCTGTCAGAGTGCCTACAAAGACCATATGAGATCTCATTCTAAAATCAAATTGTTTGAATGTGAAATTTGTCACAAACATTTGTCTGGTAAATATACTCTCAGAAAGCACAAGGAATCGCGCCACGGCATGGAAGTAGTTAGAAAGTTCAAAAAAGAGGCCAGAAATAAAACAATTAATGGTCCAGTACAATGTGTTGTCTGCGGGCAGATACTACCTTCTTCTTCAGCCTTAGAAATTCATAACACAATTCATACAGGAGAGAAACCATATCAATGTGATGTCTGCAATAGATCATTCCGATTAAAGGGTTGTTTGAAAAGGCACATTGAAACTAACCACTTAGAGAGAGAAAAAACATTTGTTTGTGAGACTTGCGGCAACAGTTTCTACAGGAAAGCAGATATCATAATTCACATTCGTTCTCACACGCAAGAGAAGCCATATGAATGTAAATTATGCCACAGCAAATTCTCCCAACTTTCATCTCTGATACGCCACAAACGAACACATTCTGGAGAGAAAACACATTCCTGCTCAACATGCAACAAACAATTTTATGACAAATATGCTGTGAGGAGACACATGCTGTCACATTCCGATGAGAGGAAACACAAGTGTCACCTTTGTGACAAACTTTTCAAGACAAAATCAGCAAGGAATTTACATCTTTCATTACATACCAATGAGACTCGTTTCATATGCAGCTTCTGTGGAATGATGTTTTCACTTAAAGGCAATCTCAAGACCCATATGATTAGGAAACATTCGGAAAAAGCCGGAGAGTGTAAAGTATGTATGAAAGAATTTCCGAATCTAGCTGAACATTTGCGCAAACATACCGGAGAAAAACCCTACGTTTGCAGGACCTGCAATCAAGCATTTGCTACACAAAGAAGTCTTTCTTTCCACACCATGTACAAACATGAGAGAGCTGATAAATATCGTTGTACGGTTGGAGAATGTAGTAAAGCATTTCCCATGATGAAGTTGCTCGAGACTCATTTGTATAAATATCATACAGACACCATGCCGTTTATGTGCAGTCACTGTCCAAGAAGGTTTTATCGTAGGTCAGATTTGACGAGACACCTTAAAGGTAGTCATTTAGACAGTGACAAACTCAAAGTAAAACCAGAGCTAATATTAACTATAGTGAATATCTAA
- Protein Sequence
- MESKICRLCLIQPGNINLFETHEDNVQYCKKIMHCANIHIAEDDGLPDFMCEECLVKLSVAFDFITKCQASDKALRSVSLNYKPEKNDVKSEYIEIKEEPEIKSETEFLDGDDHQYEDLQGKPRKSSRTKSRGPRICAICGYRAACQSAYKDHMRSHSKIKLFECEICHKHLSGKYTLRKHKESRHGMEVVRKFKKEARNKTINGPVQCVVCGQILPSSSALEIHNTIHTGEKPYQCDVCNRSFRLKGCLKRHIETNHLEREKTFVCETCGNSFYRKADIIIHIRSHTQEKPYECKLCHSKFSQLSSLIRHKRTHSGEKTHSCSTCNKQFYDKYAVRRHMLSHSDERKHKCHLCDKLFKTKSARNLHLSLHTNETRFICSFCGMMFSLKGNLKTHMIRKHSEKAGECKVCMKEFPNLAEHLRKHTGEKPYVCRTCNQAFATQRSLSFHTMYKHERADKYRCTVGECSKAFPMMKLLETHLYKYHTDTMPFMCSHCPRRFYRRSDLTRHLKGSHLDSDKLKVKPELILTIVNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00236069;
- 90% Identity
- iTF_00236069;
- 80% Identity
- -