Bmor014229.1
Basic Information
- Insect
- Bombyx mori
- Gene Symbol
- ZBTB41
- Assembly
- GCA_027497135.1
- Location
- CP114963.1:16660587-16679459[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.16 9.1 7.0 0.7 3 23 116 136 114 136 0.97 2 15 0.00018 0.01 16.3 1.9 1 23 240 262 240 262 0.99 3 15 4.7e-05 0.0026 18.1 0.3 1 23 268 291 268 291 0.96 4 15 0.0012 0.064 13.8 4.3 1 23 296 319 296 319 0.94 5 15 0.00095 0.053 14.0 0.8 2 23 474 495 473 495 0.97 6 15 9.9e-05 0.0055 17.1 2.8 1 23 501 523 501 523 0.98 7 15 6.4 3.6e+02 2.0 6.9 1 21 573 593 573 595 0.92 8 15 2.7 1.5e+02 3.2 0.0 1 23 602 624 602 624 0.89 9 15 0.0048 0.27 11.8 7.1 1 23 630 652 630 652 0.98 10 15 0.0038 0.21 12.1 1.1 2 23 660 681 659 681 0.95 11 15 0.11 6.1 7.5 4.6 1 23 690 712 690 712 0.98 12 15 0.00012 0.0066 16.9 0.6 2 23 756 777 756 777 0.97 13 15 0.002 0.11 13.0 4.7 1 23 794 816 794 816 0.97 14 15 1.1e-06 5.9e-05 23.3 0.7 1 23 822 844 822 844 0.98 15 15 4.9e-07 2.8e-05 24.4 3.1 1 23 850 873 850 873 0.98
Sequence Information
- Coding Sequence
- ATGAACGTTGTAACATTAGACATAGACCCACTGAGCAGCTACGAGTACCCTTACGATTATGAAAACATACCGGAGCCCTATCCATACGTGCAGGATGTCAAAAACGAATGCCACTACCAGTACGGGCAAAATTATCAACACACTCAGCAAAGTAATGTTGTTGAAGACAAACCACCCGAAGTTCCTGCAGAGAAGATTGCCGTTGAAAATAATGCTGAAGATACAGCGAAATCAGATGTCAAACAAGATTTAAAACCAGTCTTAGAAGACGAGCAGAAGCCTAAAGTCAAGAAAAGCAATTACTGGTCGATTAAAATCAAGGAGAAGAATTTTTCCTTCTACGGATGCGCCCTGTGCAACATTAGTTACTGCGAACTCCAAATGCTCGATCAGCATATGACGACGCACAAGGACAGGCTGACCAGCTACGATTTGAGAGTGAAAAATCAAATTAAACGGAAGAAAATTAAAAAAGAAAAGAAGATTAAGAAGAGGATCAAAATTGAGAAAACGGAAGACGGGATAGAGATTAAGCCAGAAGAGGGTTTTATTGGTGAGGAGAAGGCTTCAAATTATAACAACGACAAGGTTATGTCGGATAATGATAAACAAGATAATGATGAGCGTAAAGATAACAATGCTAACACAACAAAGAAGAGAGTAGGCAAGAAAGTGGAGTTATTGAAGAAGCAATGTACAGATGATTTACAGAAAATATATAAATGCTTCGCTTGTGGAAAACAATTCACTTTGAGTTACTATTTGAGGCTACATGTGCGTTCACATACAGATGAAAAACCCTACACGTGTGCCGAGTGTGGGCAATCGTTCATAACGGCCAGCAAACTCGGCAGACACAATAAACGGATACACTTAGCCATCAGATACCAGTGCAGGATATGTTACAAGTTCTTTTCACAATTTGACCTATTGAAAAGGCATTTCGATAAGAAACATGCTGACGACAAACTCGAAGGAGAACCATATGATTACAACGCCATCTTGCCGTATTTGAAAGAGTTAGAGGAAGAGTTGAAGGAGAAGTCAGAGAAAGAGAAGCAGCTCAAGACCGAGGAGACTTGGCCCGATCAGTGGCAGGCAGGCGACAAGAAACCTGACACTGACACTGTTGAAACTGATATGCTGAATGTGAATGTGCAGCAAGCAGACGTCAAGACACCCCTGGCTGGAGTGGTCTCACCACCGCGGACGGTAGTCGCCGACGTGCTGTACAGCGCGGTGAAACTGGAGAATGAAGATGACAACAATGATGACGTCACGGCCGATGACGTCACCGCCGATGACTTGAAAGATGATAGCAACTCCGACGAAGACTATTTCCCTTCAAACACTTGGGCGACCGTGTCTCCGGCCCGAAGTCCGCAGCCGGCCTCGAACCGGCGCGCGAGTGGCAAGCTGACCTGTCAGATCTGCAACAAGACCATCAGCTCCGTGACGTACATGAAGGTCCACCTGAGGACCCACTCCGGGGAGAGGCCCTTCAAGTGCTACATCTGCGACCGGGGATTCATAACCTCAAGCAAAATGCACAGACATGTCCTCACCCATAACGAAGAAAATGAAATACATAGTTTGGGAGACGGCGCTGACGCGACCGGActtaaagaAGAGAAGCCAAAGAAAAAGAGAGGCAGAATCAAAAAGAAAGAGAAGACAGACCTACCGAAGATCAAAGAGAAACACAAGAAGAGGCCGCACTCGTGTGAGTTCTGCAATAAAAGGTTTTTGCATCTGGCAACACTGCAAGTTCACAAGAAATGCCACGAGGGAGAGACTTTAACGTACAAATGCGAGTACTGCCTCGAGGACCAGCCCGACGAGGAGGCGCTCCGGCTGCACGAGGCCACGCACGGCGGGGCAAAGCCCTACACGTGCACCCTGTGCGGGAAAAACTACAAGAGGAAAACGACAATGGTCCACCACCGGCAGCACCACCGCGCCGACCAGCCAGCGCTGAGCTGCCCGGCGTGCCCCAAGCGGTTCCACTCGGAGCGCAAGTTACAGCGGCACGCCGCCCGGCACGGCGCCGCCCGCTCCTCCCTGCGCTACGAGTGTCCGGTGTGCGCGCACATGTTCCACACGCGGTACCACGCCCTCATGCACCTCAAAAGCCACCTCAAGGAAGGATTGATCCAAGAGGAGAACCGGCCGGAGATCGTGGCGATGCTGCTGCAGAACGCGCGGCGCCTCCCGCAGGACCCCGGCGCCGTCCCCAGCGCCGCCGCGGACGACGAGCGCAGCCGCGTGTGCAACATATGCGGCGAGGTGTTCCAGCACTTTTACTATCTGGAGGAGCACCTCAAGAGCCACGGCTCGAGAATCGCCATCGAGGACCTGGACCGGCCCGAGGAGAAGCGCTACACGTGCACCGTGTGCCAGAAGAGCTTTAAGCTGCACTATTACCTAAAGCTGCACGGGTATACCCACTCGAAGGAGAAGCCGTACATCTGCCAGCAGTGCGGCAAGGGGTTCATCACGAAGGGCAAGCTGAAGCGGCACTTGGAGACCCACAGCGGCCTCAAGAAGTACCAGTGCCACATCTGCTATAAGTTCTTCACGAGGCCCAGCTATCTGAGGATACACGTGAGGACCATTCACGGCACGCAAGACTACAATTTCAAGATCGACAAAATCAACTCTTGGAGTCGCCCGGGCGGTCTGCCCCTCGCCAATTAG
- Protein Sequence
- MNVVTLDIDPLSSYEYPYDYENIPEPYPYVQDVKNECHYQYGQNYQHTQQSNVVEDKPPEVPAEKIAVENNAEDTAKSDVKQDLKPVLEDEQKPKVKKSNYWSIKIKEKNFSFYGCALCNISYCELQMLDQHMTTHKDRLTSYDLRVKNQIKRKKIKKEKKIKKRIKIEKTEDGIEIKPEEGFIGEEKASNYNNDKVMSDNDKQDNDERKDNNANTTKKRVGKKVELLKKQCTDDLQKIYKCFACGKQFTLSYYLRLHVRSHTDEKPYTCAECGQSFITASKLGRHNKRIHLAIRYQCRICYKFFSQFDLLKRHFDKKHADDKLEGEPYDYNAILPYLKELEEELKEKSEKEKQLKTEETWPDQWQAGDKKPDTDTVETDMLNVNVQQADVKTPLAGVVSPPRTVVADVLYSAVKLENEDDNNDDVTADDVTADDLKDDSNSDEDYFPSNTWATVSPARSPQPASNRRASGKLTCQICNKTISSVTYMKVHLRTHSGERPFKCYICDRGFITSSKMHRHVLTHNEENEIHSLGDGADATGLKEEKPKKKRGRIKKKEKTDLPKIKEKHKKRPHSCEFCNKRFLHLATLQVHKKCHEGETLTYKCEYCLEDQPDEEALRLHEATHGGAKPYTCTLCGKNYKRKTTMVHHRQHHRADQPALSCPACPKRFHSERKLQRHAARHGAARSSLRYECPVCAHMFHTRYHALMHLKSHLKEGLIQEENRPEIVAMLLQNARRLPQDPGAVPSAAADDERSRVCNICGEVFQHFYYLEEHLKSHGSRIAIEDLDRPEEKRYTCTVCQKSFKLHYYLKLHGYTHSKEKPYICQQCGKGFITKGKLKRHLETHSGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFKIDKINSWSRPGGLPLAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00236066;
- 90% Identity
- iTF_00236066;
- 80% Identity
- -