Basic Information

Insect: Bombyx mandarina
Gene Symbol: HIVEP1
Assembly: GCA_003987935.1
Location: NW:409256-426472[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00013 0.0058 16.5 0.6 1 23 146 168 146 168 0.98

2 8 0.059 2.7 8.1 1.4 6 21 179 194 174 198 0.87

3 8 0.0046 0.21 11.6 0.0 1 20 422 441 422 443 0.91

4 8 2.1e-06 9.6e-05 22.1 2.0 1 23 1192 1214 1192 1214 0.99

5 8 4.7e-05 0.0021 17.9 3.2 1 23 1220 1244 1220 1244 0.92

6 8 1.2e-05 0.00052 19.8 1.3 3 23 1633 1653 1632 1653 0.97

7 8 0.00012 0.0055 16.6 1.5 1 23 1659 1683 1659 1683 0.92

8 8 0.001 0.047 13.7 2.6 1 23 1704 1728 1704 1728 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00013	0.0058	16.5	0.6	1	23	146	168	146	168	0.98
2	8	0.059	2.7	8.1	1.4	6	21	179	194	174	198	0.87
3	8	0.0046	0.21	11.6	0.0	1	20	422	441	422	443	0.91
4	8	2.1e-06	9.6e-05	22.1	2.0	1	23	1192	1214	1192	1214	0.99
5	8	4.7e-05	0.0021	17.9	3.2	1	23	1220	1244	1220	1244	0.92
6	8	1.2e-05	0.00052	19.8	1.3	3	23	1633	1653	1632	1653	0.97
7	8	0.00012	0.0055	16.6	1.5	1	23	1659	1683	1659	1683	0.92
8	8	0.001	0.047	13.7	2.6	1	23	1704	1728	1704	1728	0.93

Sequence Information

Coding Sequence: ATGCCGCTCAATCAAGAAAAACGTTCGAACATAACTGTTTCTAATAACAATGACCACAACTACCTTcacaagaaatttaaaaaaatggcatcTACTATACCCGTTCTACCATCAAATCAGTCAAGAGGTCAGGAAATtagacaaaaagaaataaacgtgATACAGAATGCATCTAATGCTCCGATAACAAATGGAAGCATTTCTGCAGCACATcctgaaattgaaaaaattaaagaaaaacaacacAGGCAGCACGTAGATGCGGGtgaaaataatgtacaaattaattataatgatgaAAATAGTAAGTTAGATAATGTAAATACTGTTCAACTATCTGGTCAAACCAGTTTGACAGATGAATTTTTAAACAAGACTGAGAAccttgaaaatgattttatcaggGATGCCTATAATGGCACAGTAGGCGGGCGATATATATGCCCATATTGTAAATTATCTTGTGCCAAGCCTTCAGTTCTTCAAAAACATATCAGAGCACATACTAACGAGAGACCCTATCCATGTATACCTTGTGGATTTGCCTTTAAgacaaaatcaaatttatacAAACATTGCCGATCACGTATGCATGCGTTAAGGTTACAAGGAACAGATATACCTATGACTCTAAATGACGACGAAATGTCAGGGGGGTCCGAAAGTGACACTCCTACCTCTATCTCTGAAGCAGGGTCAGACGTTTCGAATTGTCGAATAGAAACGTTGGACTATAAGCCTGAACCCGAACGGCTTACGGATATAACACAACTCCGCTACACAAATACATCTCCAAGTGAGACCAGTAAATCGAAGACAATTTATAAACCTAAATTTAGAGCCGGAGTTGCGTTTTACCGTGAAAGCGATGAGaaagaaaaattaaagaaatcaatATCACCAAATGCAGATTTTCTCAACGAACATATCTCTAAAATTATATCAGACAACGAAGCTATAATTGATGTTATAGAAAcaccattacaaaaaaaatatggtaaaatCAAACAAATAGCAGAAAGTAAACAACTTATGAATGACATTAACGAAATAAAGTCGGATTCGTCTCCCTTGAATCtgacaaaaaacaataatgaaacaGAAGTTTCGTTCAGGAAAAGATCCCATTCTGAAAGTTTTTCACAGGGTCATTTTCAAAAACACCCTTTGAATCCTGAGGGATCTATAATAAAAGATCTCCTCTTAAAAACGAAAATGGACGGAATGGTGCCAATTACCGGAGAACTGCTCGAAGGTCCCCTATTTCTTTGCCCTGTTTGTCAAATAATGTACAGAAGTGCAGATAATTTAGAAATTCATAGGCTGTATTATTGTAAAGGTAACGTTAACAGTAATGTAGTCAGTGACAGTAAAGATCTAAAAGTTATAAGAACTgacaatatttttgtaagaaGTAATTCTGTTAATGTGCGATTACCTGAAAGTAGTTCAAGTGCTATTCAAAAATCAGGCATAAATTCAAAATCAGCACCAGCTCGATTAAAACCAGAGAACCTCGTTATCACGAAGGCAGAATGCAATGATGTGGTAGCTCCTTTGCCATCACCAGGTCCTTTACTCGGCAACACCCGACTTGTAGATTCAAGAATACCATCTGAATTTGCTAGAAAAAACGACGTTATAAAATCAAAACCTATAGCAAGTCCAAAAAGGAAAATTGATAGTCATTCTGATGCATACAGTCCAAGATTAGTAGAAAACGTATCACCAAGATCTACTGACTTGTATTCTCACCCAAAATTGAGATGCGTAGAAACAAATTCGAATAATTTACGTTCGATCGAAGAAATTTCACCTAATTTAAGAATTAATTCAACATCCCTTCAAATGTTTGGTGGTGAAGTGAAGATAGTAGACCATTCTGGGAGCACTACAACATTGCGTATTGAACCAAATAAAAACCAATTGTCACCTATAATGATTCATACAAACTTGTCGCCATCGAAGCTTATTAGTGACATTGAAGCAAGTAGTGTTGTAGTTAGATCTGGTTTGCATTCAGGCGGGACAATCGTTCATAATCCTCCAACACCGAAGGAAAACTTGAGTACTCCACAGCCACAGACGCCTAGAATGACAATATCAACGACtggtgttccaaattcaaacttGCCGAATATTCATGATATAACTCATTTTCAATTTCCGCCACTCAGTGCAATTACGGCTTTTAATCCGTTAACACTGCCTCCATTGAGTCCTTCAGCATCTGTATCACCCAACGGAGCTACGAAAATTATGCATGGAGGGAAATTGATCCCACACGTTCCAGGTATACCAGGACCAAATACTCCAAGTAGGTTTATAGGAAATACAAATACAGTTCCAAAAAATCTAGGGAATAACGATAAAACAATTTCTATACATGATGATAAACACTCAAACTTAGGAGCCATACACCCTATAAAAAGTCCTCACGTAATGGCGAAGTATGATACTCAGCAATTGCGCAATACACGAAGTCCTAATTTGAGGATACCTCACATGGAAACCGAAAAACATGTTCAGACACATGAACATAGTGAAGTACATTATATTTCTTCCATTCCTATTATCAATGTAAATAATGCTGAAGACACAAAAATATACTCCTCCAACACCATAAAACAACTCCATAGACAAGATGTCGGGCTGAAAAGAAACGCTGAGGGAGTTTTAAGGACACCTGTCTTGAAAGAAAACGTTAACTtcccaaacaataaaaataaaaataaagcaccTGGATTGTTGATCAAAACAttagatattaaaaatgaaaaagaaatacgtaattttaattttgagaaTTTGATAACGAAAACTGAAATTTTCAATAACCAAGTTCCAACTTCATGCGATATTCAGAAGAATAACACACAAGTTACAACATCGTGTGCAACTCCGCAAAATGAAAGGTCGGAGcctttatattttcaaaagaaCATAATGGTAAAGTCTGCTAACGGTGAAAGAAAACCAAAATTTTTGAGGCCGTCTACGTTGCCTTTAAAGCCTGGGACGTTTACACCAAAAAGACATCACGGTATTACACCAAATGCAAATACTATGCCCTTGGTATCACCCGAAACTCCCAGACCAGCCAAGGCCTATGGGCAGTTGTACCTTAACGGAAATGCGTATACGTACTTGGGCCTGAAATGTTCAACTAAGGTTTTTTATTGCACCATCAACAGACCTCAACCAACTTACGTTCCAAATCAACATTTTCTTTCCATGTACAGTAATTGGCAGttattATCAGAATTGACACCAGACCCATTAGGGTTGTCGGCGTCTTCAGCTATGTCTTTATACGATTCTCGACATCGACCACAAAATATGTCAGTAGCAGTAATTAAGCACGATCTTATTTTAACACACTCATCACAATGGAATACatttataaaagaaaagaaacagGTGCTCCAGTCACTAGATGTAAAAAAGATAGAGGAAAATAAGTCTCAAATTATGTCAGAGTCTGAAAATTTGATGACTCCCAAAAAAGAGTTGACTGGTGGCTTTGAAAGTAATGAAGAGTACACATATGTTCGGGGGCGTGGGAGAGGACGTTACGTCTGCTCCGAATGCGGTATTAGATGCAAGAAACCATCCATGTTGAAGAAGCATATTCGCACTCACACCGACGTGAGGCCTTACACATGCGTGCATTGCGCTTTCAGctTTAAAACTAAGGGCAATTTAACTAAACATATGAAAAGCAAAGCtcattacaaaaagtgttgtgAGTTGGGTATAAATCCAAATGAAGGTGATTGTGACACTAATGAAATGGCCCAATGCTCTGGTGAAACAGATGACGACACTGATTCAGATGGAGATGAAGGAAATGAGGGTGAAACTGAATCCAGTGATACGGAAGCATATAAATCTCGTTTACCGGAACATGAAGCTGCACATTGCTTGTTGTCTTTAGGTGGTAACAGACCTTCTACGTCAGCTACCCCGGGTTTATTAACAAGTGCTAGACCAACAACGTATCCTTACGCACCCGTGGGATTGGAATGTGTCGAAATATACACAGAACAGGTTAGGGCTTCATCTGTTGATGTGAGAGTTGATGCAGAAAATGAACCTATTGATCTCAGTAAAAATGATGTGAAAACACCGAACATTCCTGAAATTCCAACTGCAAGAGAATCCAGTGTTTTAGCTTCTTTGGCTTCAAATACCGCTAAGCTCCCTCAAGCTCCGAATCAATGGACAAATGGGGAACCTTTGCTACACACATATTTGACCGAAAGAGCTTTATTAGATACAAAAATAAAGCAAAGTCAAGTTACGAGTTGCCTGagcaaacataaaaatatcgatttagAAAAATCTGCGTTCACGGATGATGCAGTAGAAAATCAAAATAACACAGAAAAAGTCaaatctttaaattatattaaaaatgatgaTAGAGTAAGAAATACAAATGAATGTGAcgaaattgaaaataacataTCCTCCGTGGCACTTAACGATATGGTAATTGATACAAAAGATTCTACCATAATGAACAGCAATGTACCAATTGATATGAAAAAGTCGTTTGTGCAGAATAGTACAAATTCTAACGCAGAAAATGCAAAACACGTAGTGTCCGAATATTTAAAACAAGCAAAGATTAATCTCATCAAAGCGCAAGAGGATATGTCAATTAATCAATCAGAAAACTACGGTGAAGAAAAAAATGGCGATGATATCTTAAAATCTGATGAATTTTCAGATTCAGAAACCATGAAGTCATCATCGATATTGGAACATGATTCTGTTGCGACAAAAGTCGTAATTGGTGTGGGTGGCGTGGCTTTTAAGGTTACTAAAGGCAAAGAACTTGAAAGTTCTTCATATCCCCCTGGCAGAATCATGGAAGACGGATGCAGAGAttgcaatttttgtaataagacATTTACGAAACCTTCACAGCTACGGTTGCATCTAAATATTCATTACATGGAAAGGCCCTTTAGATGTAGTATATGTGCCGTGAGCTTTCGCACACGGGGTCATTTACAAAAACACGAACGGTCTGCTTCACATCACAACAAAATATCAATGACTTCAACATTCGGGGCAGCAACGTCGTTTAATCCCAGACCGTTTAGATGCTCCGACTGTAATATAGCGTTCCGAATTCATGGACATCTTGCTAAACACTTAAGAAGTAAAATGCATGTTATGCGTTTAGagtgtttgtttaaattacCTTTTGGTACATTCACCGAGATTGAACGCGCCGGTGTTAGTTTGACAGATATAGACACAACAGATTGTGATAGTTCGCTGGCTAGCTTGCAATTGCTCGCAAGGAAGCTTCACGAAAAAGATCCAACAAAATTGGAATATCGAGATCCTAACGGTCTAACAATAGTAGAACTACCTGCAGGCAGGGAACTGTCGGAAGACGAAGATAACACACCCGCCGATAACGCATGTGTTAGTGAAAAAAACAGTAATGGAAAAACAAGTGAAGGTAATGAAGATCAAGAAATGGAAACACGTGTTAACTGTAGTGCCACAGATATTTAG
Protein Sequence: MPLNQEKRSNITVSNNNDHNYLHKKFKKMASTIPVLPSNQSRGQEIRQKEINVIQNASNAPITNGSISAAHPEIEKIKEKQHRQHVDAGENNVQINYNDENSKLDNVNTVQLSGQTSLTDEFLNKTENLENDFIRDAYNGTVGGRYICPYCKLSCAKPSVLQKHIRAHTNERPYPCIPCGFAFKTKSNLYKHCRSRMHALRLQGTDIPMTLNDDEMSGGSESDTPTSISEAGSDVSNCRIETLDYKPEPERLTDITQLRYTNTSPSETSKSKTIYKPKFRAGVAFYRESDEKEKLKKSISPNADFLNEHISKIISDNEAIIDVIETPLQKKYGKIKQIAESKQLMNDINEIKSDSSPLNLTKNNNETEVSFRKRSHSESFSQGHFQKHPLNPEGSIIKDLLLKTKMDGMVPITGELLEGPLFLCPVCQIMYRSADNLEIHRLYYCKGNVNSNVVSDSKDLKVIRTDNIFVRSNSVNVRLPESSSSAIQKSGINSKSAPARLKPENLVITKAECNDVVAPLPSPGPLLGNTRLVDSRIPSEFARKNDVIKSKPIASPKRKIDSHSDAYSPRLVENVSPRSTDLYSHPKLRCVETNSNNLRSIEEISPNLRINSTSLQMFGGEVKIVDHSGSTTTLRIEPNKNQLSPIMIHTNLSPSKLISDIEASSVVVRSGLHSGGTIVHNPPTPKENLSTPQPQTPRMTISTTGVPNSNLPNIHDITHFQFPPLSAITAFNPLTLPPLSPSASVSPNGATKIMHGGKLIPHVPGIPGPNTPSRFIGNTNTVPKNLGNNDKTISIHDDKHSNLGAIHPIKSPHVMAKYDTQQLRNTRSPNLRIPHMETEKHVQTHEHSEVHYISSIPIINVNNAEDTKIYSSNTIKQLHRQDVGLKRNAEGVLRTPVLKENVNFPNNKNKNKAPGLLIKTLDIKNEKEIRNFNFENLITKTEIFNNQVPTSCDIQKNNTQVTTSCATPQNERSEPLYFQKNIMVKSANGERKPKFLRPSTLPLKPGTFTPKRHHGITPNANTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNMSVAVIKHDLILTHSSQWNTFIKEKKQVLQSLDVKKIEENKSQIMSESENLMTPKKELTGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCVHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGDCDTNEMAQCSGETDDDTDSDGDEGNEGETESSDTEAYKSRLPEHEAAHCLLSLGGNRPSTSATPGLLTSARPTTYPYAPVGLECVEIYTEQVRASSVDVRVDAENEPIDLSKNDVKTPNIPEIPTARESSVLASLASNTAKLPQAPNQWTNGEPLLHTYLTERALLDTKIKQSQVTSCLSKHKNIDLEKSAFTDDAVENQNNTEKVKSLNYIKNDDRVRNTNECDEIENNISSVALNDMVIDTKDSTIMNSNVPIDMKKSFVQNSTNSNAENAKHVVSEYLKQAKINLIKAQEDMSINQSENYGEEKNGDDILKSDEFSDSETMKSSSILEHDSVATKVVIGVGGVAFKVTKGKELESSSYPPGRIMEDGCRDCNFCNKTFTKPSQLRLHLNIHYMERPFRCSICAVSFRTRGHLQKHERSASHHNKISMTSTFGAATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCDSSLASLQLLARKLHEKDPTKLEYRDPNGLTIVELPAGRELSEDEDNTPADNACVSEKNSNGKTSEGNEDQEMETRVNCSATDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00236915;
90% Identity: iTF_00236915;
80% Identity: -