Basic Information

Insect: Bombyx mandarina
Gene Symbol: zfy1
Assembly: GCA_003987935.1
Location: NW:5687166-5697141[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.14 6.5 7.0 2.7 1 23 209 232 209 232 0.95

2 11 0.00048 0.022 14.7 2.8 1 23 238 260 238 260 0.99

3 11 0.21 9.4 6.4 1.2 1 19 264 282 264 287 0.86

4 11 0.23 10 6.3 1.5 1 23 294 318 294 318 0.97

5 11 0.28 13 6.0 0.4 3 23 323 343 322 343 0.93

6 11 1.6e-05 0.00074 19.4 0.3 2 23 350 372 349 372 0.95

7 11 5.2e-06 0.00024 20.9 1.5 2 23 381 402 380 402 0.96

8 11 0.00039 0.018 15.0 0.3 1 23 410 433 410 433 0.96

9 11 0.00011 0.0049 16.8 8.1 1 23 440 463 440 463 0.97

10 11 1.9e-06 8.8e-05 22.3 0.4 3 23 474 494 473 494 0.98

11 11 7.4e-05 0.0034 17.3 0.3 1 23 500 523 500 523 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.14	6.5	7.0	2.7	1	23	209	232	209	232	0.95
2	11	0.00048	0.022	14.7	2.8	1	23	238	260	238	260	0.99
3	11	0.21	9.4	6.4	1.2	1	19	264	282	264	287	0.86
4	11	0.23	10	6.3	1.5	1	23	294	318	294	318	0.97
5	11	0.28	13	6.0	0.4	3	23	323	343	322	343	0.93
6	11	1.6e-05	0.00074	19.4	0.3	2	23	350	372	349	372	0.95
7	11	5.2e-06	0.00024	20.9	1.5	2	23	381	402	380	402	0.96
8	11	0.00039	0.018	15.0	0.3	1	23	410	433	410	433	0.96
9	11	0.00011	0.0049	16.8	8.1	1	23	440	463	440	463	0.97
10	11	1.9e-06	8.8e-05	22.3	0.4	3	23	474	494	473	494	0.98
11	11	7.4e-05	0.0034	17.3	0.3	1	23	500	523	500	523	0.97

Sequence Information

Coding Sequence: ATGGATTTTAAAGACCTAACTTATTGTTTAACAGATGACGAAGTTCTTGTGCCGAAAgcaaatgtttgtttttgttgcttaacTGACGGTAAAACATTAATTGAATTTCGATTGTGTAAACACCGGATATTCcttgaaaatcattttaaagaaaagttgaatatacaaaatctatttgtgtgtgtcaaatgcCACAGTTTCATGAAAAAGATCAATCTGTTTTTGGAGCAAGTGGAACAGAGCTACTCCATGCTAATGGTAAAGACTCCATATAACAATGTTAACATGACTATGAATCTCGTAAGAAGCAAAATTGAAGTGATATCAACCTTAAAtgatgtaaatgaaataaaaattgaacctCTCACTGCTCGAATtgaaaatgaaagtaaaattgaaattaggCTTGAAGATGCACACAATATTAGCAAAGCAGATATTAGTATGGCAACACTACAGAGTCTTAATGAACCTCTACAGGCCGATCATCCTGAAGAAATAAAAGTATGTGAAGGTATTGAGGACTGCTTCGGAGCCAAACTAAAGACAACATACCTCTCACGGACAGAACTTGAAGCCGAGAGAGAGCTAGCAAAAACGCAAAGCAAGTACACAGCGAAATTGCACAAATGTGAAAAATGTGTGGTTTCATACGATAATGACTTGCATTTGAGAAATCATTTGCTTTTGAGGCATAATGAGaaaaaTCGTTACAAGTGCGAAATCTGTGACTGTACTTACGACACAGAACTCAAATTGGAGACGCACACCAGGAGGCATTACCTTAGATTCGAATGCTTAGAGTGCAATAAGCGGTACGTGGACAGGAAAACGGCAGCCATACACTGCCAGGCGAAGCATTCGGAACGTGTCGAGACGTATAGTTGTGATTATGTCCATTGCAGCTATGAGACCAATTCTCTTGCCAGTCTGAGGTATCACGCATCGAAACACAAAGAAGAATTCTGCGAATTGTGTAAGAAAACGTATCCATACGGAAGACTCTGGAATCACATGAACTTGGTACACGGAAACGTTGCGAAGATCAAATGCGATCTGTGCGATAAATCTTACAAGCAACGTTCGGCGCTCGCGATGCATCGCCTATCCGCCCACAGTGGGGACGGTAGTCAGGAATCGTACTGCGTCGACTGTGGGAAGTTCTTCTGTAACAAATACAGTCTGGCCGTTCACTTGAGGGAGCATTCCGAACATGTGGGTAAAAGatacgAATGCGATGATTGTGGATTGAAATATTATACGAGACGAAGCATCGTCAGGCATATAACGAGTGCGCATTTGGGCGGAGCAACCGAGCATAAGTGTCCACGTTGCGACAAGATATTCACTACAGCGCATCACAAACGGAGACACATGAGGCTCAAACACGAAAGCAAGAAGAGGCCCCGGGATAAGATATGCGAGATTTGCGCGCGCAGCTTCACGTCTTCGAAAATGTTAAAGGCGCACATACGCACGCACACCGGTGAGTGCCCGTACGTTTGTCCGGTGTGCGAGGCCACTTTTGCTCATTCGGGCACGCTGTACAACCACAAGCGGCTGGTGCACGGGCGCGGAATGGAGAAATGA
Protein Sequence: MDFKDLTYCLTDDEVLVPKANVCFCCLTDGKTLIEFRLCKHRIFLENHFKEKLNIQNLFVCVKCHSFMKKINLFLEQVEQSYSMLMVKTPYNNVNMTMNLVRSKIEVISTLNDVNEIKIEPLTARIENESKIEIRLEDAHNISKADISMATLQSLNEPLQADHPEEIKVCEGIEDCFGAKLKTTYLSRTELEAERELAKTQSKYTAKLHKCEKCVVSYDNDLHLRNHLLLRHNEKNRYKCEICDCTYDTELKLETHTRRHYLRFECLECNKRYVDRKTAAIHCQAKHSERVETYSCDYVHCSYETNSLASLRYHASKHKEEFCELCKKTYPYGRLWNHMNLVHGNVAKIKCDLCDKSYKQRSALAMHRLSAHSGDGSQESYCVDCGKFFCNKYSLAVHLREHSEHVGKRYECDDCGLKYYTRRSIVRHITSAHLGGATEHKCPRCDKIFTTAHHKRRHMRLKHESKKRPRDKICEICARSFTSSKMLKAHIRTHTGECPYVCPVCEATFAHSGTLYNHKRLVHGRGMEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00236892;
90% Identity: iTF_00236892;
80% Identity: -