Bman009543.1
Basic Information
- Insect
- Bombyx mandarina
- Gene Symbol
- SNAPC4
- Assembly
- GCA_003987935.1
- Location
- NW:981494-985527[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.2 5e+03 -2.8 0.0 22 33 222 233 221 237 0.81 2 5 1.9e-09 1.3e-06 27.9 0.1 1 45 253 299 253 300 0.94 3 5 2.4e-08 1.7e-05 24.3 0.2 3 44 308 353 306 355 0.94 4 5 8.4e-12 5.8e-09 35.4 0.0 1 43 359 401 359 403 0.97 5 5 1.2e-09 8.3e-07 28.5 0.0 3 46 411 456 409 456 0.94
Sequence Information
- Coding Sequence
- ATGTTACAAGATAGCGATGAAGACGATTTGAATGACTTAAATCAACTCAATGCAGTTTTAGAAGCTGACAAGCAAATAATCAATGAAGAAACGGTATCAGATTCCTGCTCAACAACCACCAATGCAGCATTGCACAGTAAAGTATCTGAAGAGTTATCTTTGATAGATACAGCACTGACTCTCAATAAACTCACTGATGAAAAGTTAAGAAAACTTGAGAACCTACTGATTGAACGATTGcaagattgtaaaaaaaaaaaacttgcagatTTAAGAGATGTCAGACCTACCAATTACCGGCAGGCTTGTTTTCGCTATCACTACTGTGCAAAGccttattttaaagataaatataacTTTGCGGCACCTAGCAATGAGGATACAATCCTTATGCTGCAATCAAACATGTTTGACTTTTCACAAATCGTCGCAGTAACCGGCTGGACCCTCCGAGACAAAAGTCAATTTCTTGCTGAACTTCATAAAATGTCTCAGACGATCAGAAAAAATGAACTTCATGAAAAAATTAGTGTTCTACGTAGAGCACGAAAAACAAAAGATAAGAAGGAAATTGATAAAGAAATTGCAAAACTCAGCAAGGAGCTATATGATGTTAAGAAGAAACCACTTTCAGAATTGGCTCTAGACATAGATGAGGATTATGATTGGGATGTTCTAGCCAACAAGTTGAACCGTAGGCATACAGCACAAGAATACCAGGCACTGTGGAAGCTATTCTTTCATCCCAGCATTAACAAGAAGACATGGACTAAAGCTGAACATTTATCTCTACAGAGTATCTCCAGTGCTCATAAGTTCCAGGATTGGGATACAATTGCCAAAGAACTCAATACTGGGAGAACAGGCTACcagtgttttgtttattttagaacaaatatgGTAAATTCATTCAATGGAAGAAAATGGACTGAGGAAGAAGAAGAGTACTTAAGAAGATTGATTGACTATTACAGAGAAGACACTTATATTCCATGGGGCAGAGTTGCAGCAGCAATGGAAAATAGAaccaaaatacaaatatataacaaGTATACAAGGCTTGTTGGTAATAGAAAAGGTAGATTTTTGCCTGAAGAAGATGCAgtcattttaaattatgcaaGCAAGTTTGGAACAAATTTTCGGAAAATGTTGACATATTTGCCGGGACGTTCCATGGTTCAAATTAGAAACCGCTATCGTGTACTAAGTAAAAGATGTACCTCCACAGTGTGgacagaagaagaagataaaatgCTCATACAGCTCATGGCAAACCAAGATggaaatgtaaatttttcaaGTGTATCTACTCATTTTCCGGGAAAAGACAGGGAAAATCTTAGAAGTAGgtacattacattattaaaatggATGAGAAAGCACCCTAATGTTGATATTAAACATGCTCCACGTAGAGGAGCAAGACGTCTCACTCATGGTGAAGCATCAGCTGATTTAAACAAAGCACTTGAGGATTTAAAAAATCGCATGGAAAAtgaagttaaaacaaaaaaaagcaaaaggATGACAAGAGAATCATCAGAAAGAGATATAGAAAAAGCTATAATTGCAAGTCTTGTCAATGAATTACTAGTGGAAAGAGACATGAAACTTACCGAACAATATGAGAAAGATTTGGACATAATTGATGTTGATGAAAGACCACCATCTCTGAATGtaacaaatttaaacaaaattttgactCTTCTAAATGCAAGTATAAATAAAACCAGTTTTCAACACAGCAGCTATGCCAAGACTTATCCAGAATTACTTTCAAACACACAAGTAAATTTGACACAGGTTAAGTCATATTCTAGAAAGAATATATCCCCAAATAATCTTGATTGTACAACAGAAATTTGGGGAAATAATGCTCTTGGCCCAGTAAAACATGTCTTGCCTCCACATTATGCAACAATAACTGGGTGCAGATCCCTAATAGCCTACGCTTGTACTAAAACTTCACAAACAGAAATAGATGTAAACATTAATCATGTAATGAAACGTAATACATTTTTGAGAGATCAATTTAATCTACTTATAGATCGTTTCAATACATTATTTCTTTGGCCAATGTTATTGTCTAATGAAAGTCCATATATACCTAATCTCACAGTACCTGGTACCTCCAAAGAAACACAAAAGCGGACTTATATGAAAAATCAGACACCATCAGATATACCAGCATATCATGTTCCATACAAAATCAGATCCAAAAATCGTGACAAtgagattaataaaataaatgaaatagattTGAAAGATAAATTCTTAAAAGATGATGTGACAATCAAAGAACAGTTTACAGAATGCGGACTGATGGAAATTGATGATGAGTGA
- Protein Sequence
- MLQDSDEDDLNDLNQLNAVLEADKQIINEETVSDSCSTTTNAALHSKVSEELSLIDTALTLNKLTDEKLRKLENLLIERLQDCKKKKLADLRDVRPTNYRQACFRYHYCAKPYFKDKYNFAAPSNEDTILMLQSNMFDFSQIVAVTGWTLRDKSQFLAELHKMSQTIRKNELHEKISVLRRARKTKDKKEIDKEIAKLSKELYDVKKKPLSELALDIDEDYDWDVLANKLNRRHTAQEYQALWKLFFHPSINKKTWTKAEHLSLQSISSAHKFQDWDTIAKELNTGRTGYQCFVYFRTNMVNSFNGRKWTEEEEEYLRRLIDYYREDTYIPWGRVAAAMENRTKIQIYNKYTRLVGNRKGRFLPEEDAVILNYASKFGTNFRKMLTYLPGRSMVQIRNRYRVLSKRCTSTVWTEEEDKMLIQLMANQDGNVNFSSVSTHFPGKDRENLRSRYITLLKWMRKHPNVDIKHAPRRGARRLTHGEASADLNKALEDLKNRMENEVKTKKSKRMTRESSERDIEKAIIASLVNELLVERDMKLTEQYEKDLDIIDVDERPPSLNVTNLNKILTLLNASINKTSFQHSSYAKTYPELLSNTQVNLTQVKSYSRKNISPNNLDCTTEIWGNNALGPVKHVLPPHYATITGCRSLIAYACTKTSQTEIDVNINHVMKRNTFLRDQFNLLIDRFNTLFLWPMLLSNESPYIPNLTVPGTSKETQKRTYMKNQTPSDIPAYHVPYKIRSKNRDNEINKINEIDLKDKFLKDDVTIKEQFTECGLMEIDDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00236578;
- 90% Identity
- iTF_00236578;
- 80% Identity
- -