Bman003391.1
Basic Information
- Insect
- Bombyx mandarina
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003987935.1
- Location
- NW:1295428-1497591[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-15 5.6e-12 44.7 0.0 1 38 302 340 302 343 0.95 2 2 6.8e-19 6.6e-16 57.3 0.0 1 43 513 556 513 558 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAGTGCTCATTCGCGCGGTGCCAGCAGGAACGTAGAGCCATACGCAAGGAGCTACAGCGCTGGACCAAGAACATGGTCTACATACTGGGTCTAGAACGGGTGGCGGAAGAGTTGATGGGTAGAAGAAAATGGAAACTATATCAGGACGCGTTAATACCAAAGCGAAACGAACAGGACGATTCAGACGATTCGATGCCATCCACCGACCCGCCCCCGGCGCTCAAGATCAAAACCATCGAGGAAATCAACGCGCCAGAAGACGAGAGGCCCAGGGTCGAGAGCGATGGAAACGGCCAAGAGTCGAAGACGTCACGGCCGGAGACGATCCTGGAGAGTCTGATCAAGAGACCAGCGACGCAACCGAAAGTGGAAGTCCTAGAGGAACCAGCGGATTGGAAGCCGCCAGACAAGTGCTACTTCTGCGTAGATGGTGAGCCCAGGGCTACAGCTGAAGCTGCTCAACCCGTCGGCGCTACCAGTCCCGCGTCAGAGTCCGATAGCAGTTCTGTGTCCGGCACGAACAGTCCAGCTGCGGCTCCTCCACTGCTGCAGCATCTCCTGCAGCTCCAAGCGCAGAACCCACAGACTATAGCACAGTTCCAGCAGATGATAGCGGCGTTGACGGCGCTGGGCACGGGGCTGGTGCCTCCACCGCTCACGCAGGCCTGGATGATGCAGAGGTTCGCGCAGCAGCGACACCAGGCCGACAGGTTGTCTGAAAGCGATAAAGCGGCGGCCCCTTCGTCTCCAAGTCCTGTAGAACAGCCGCTGGACCTGAGCGCCAAGTCTACGTCCAGCACCAGCGGTACGCCTCCGCCTGACCCCAAATTCTTGGATAGCAGATTAAGACGAACAGCTTTAGATGGAGCATCGAATAGCACGGGGCGGCGCACTTATACGGAAGACGAGCTGCAGTCAGCCCTGCGCGACATCCAGTCGGGGCGGCTCGGCACGCGACGGGCTGCCGTGCTTTACGGCATCCCGCGCTCCACCCTACGGAACAAGGTCAACAAGTTCGGCCTCGTCGCGGATAACCACGACTCCGACCCCGACAGCGACCAGGACCGCGCCGAGTCTCCGTCTTCTGTCATACTCAAGATACCGACCTTCCCTCCCCCCGATGACAAGAGCCCGTCACCAGCGACGCCAGTCACTACGCCGATCACCCCCCTCACGCCGCTCATCTCCCAGCCGCCGCCGTCTCTGAACCCGCCTTCGAATCTCCTCTTGTCACCGTCCGTGTTCGCCGACCCGCCAGCTGGATCCCAACACATTTTTACGTCGTTGAATGACGTTATAGCGAAAAGCATAAGTCAGAAATTCCAGCAGCCGCTCGACAGGACACACCAAGCGGACCTTTCCTTCATGAGAGCGCCGGACGCTCGACACGTGTCGGTCATCAAGAGCCAATCTGACAACCAAAGGAACTACGCGATGCCGAGCAATTCCAAGGTGCCTACGAACAATAACGGCCAAGCGGCCGCTGGAGGCAAAGGCACTAGACCCAAGAGAGGTAAATATAGGAACTACGATCGAGACAGCCTCGTTGAGGCGGTGAAAGCAGTCCAGCGAGGAGAGATGTCCGTGCACCGCGCCGGCTCTTATTACGGTGTCCCACACTCAACGCTCGAATACAAAGTCAAGGAAAGACATTTAATGCGGCCTAGGAAGCGCGAACCAAAACCTCCTCCGCAAGATACGAAGCCGCAGCCTCCTAAGCCGCTCCCACCGAAGCCACCGGGCAAGCCATTCTCAAACGGACTCAACGGGCCTGAGACTCCAACGTACCCGGCGGGCTACCCGTTCTGGGCTAGTCCCGGCTTCGCTCCTCCACCGACGCCAGATCTGTACGCGTCGCacatgatgcggcggttgcgtGAGGAAGCACCTCCGCCAGCAAACGGATCGTTCCTGGAGGGGATCATCCGGTCAAGCCTGGAGCGGCCCGGAGCGGCGCTGATGCAGCGGCTGGCGAGCGAGTCCCCGAGCCTGGTGCGGCGGCTCGCGGCCGACGTGGAGGAGCCGACGGCGCGACGGCCGCGGCTCGACAGCTCGGACCACCAGCTCGCGGCTGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTCCGTCCGCGGAACGGCACCCCCGCGCCCAgcccgccccccgcgccgcctGACCGCGCCTAG
- Protein Sequence
- MAECSFARCQQERRAIRKELQRWTKNMVYILGLERVAEELMGRRKWKLYQDALIPKRNEQDDSDDSMPSTDPPPALKIKTIEEINAPEDERPRVESDGNGQESKTSRPETILESLIKRPATQPKVEVLEEPADWKPPDKCYFCVDGEPRATAEAAQPVGATSPASESDSSSVSGTNSPAAAPPLLQHLLQLQAQNPQTIAQFQQMIAALTALGTGLVPPPLTQAWMMQRFAQQRHQADRLSESDKAAAPSSPSPVEQPLDLSAKSTSSTSGTPPPDPKFLDSRLRRTALDGASNSTGRRTYTEDELQSALRDIQSGRLGTRRAAVLYGIPRSTLRNKVNKFGLVADNHDSDPDSDQDRAESPSSVILKIPTFPPPDDKSPSPATPVTTPITPLTPLISQPPPSLNPPSNLLLSPSVFADPPAGSQHIFTSLNDVIAKSISQKFQQPLDRTHQADLSFMRAPDARHVSVIKSQSDNQRNYAMPSNSKVPTNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPPQDTKPQPPKPLPPKPPGKPFSNGLNGPETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALMQRLASESPSLVRRLAADVEEPTARRPRLDSSDHQLAAEMREAVQRLRADKLRPRNGTPAPSPPPAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -