Basic Information

Insect: Bombylius major
Gene Symbol: pita
Assembly: GCA_932526615.1
Location: CAKOBF010000259.1:6700-11112[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 8.6 5.1e+02 1.7 2.3 1 23 211 233 211 233 0.90

2 7 0.00013 0.0076 16.8 0.1 1 23 239 261 239 261 0.98

3 7 2.8e-06 0.00017 22.1 0.4 1 23 267 289 267 289 0.96

4 7 0.00071 0.042 14.5 0.9 1 23 294 316 294 316 0.98

5 7 1 61 4.6 2.8 1 19 324 342 324 346 0.83

6 7 0.0015 0.086 13.5 0.3 2 23 352 373 351 373 0.96

7 7 0.037 2.2 9.1 0.2 1 22 379 400 379 402 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	8.6	5.1e+02	1.7	2.3	1	23	211	233	211	233	0.90
2	7	0.00013	0.0076	16.8	0.1	1	23	239	261	239	261	0.98
3	7	2.8e-06	0.00017	22.1	0.4	1	23	267	289	267	289	0.96
4	7	0.00071	0.042	14.5	0.9	1	23	294	316	294	316	0.98
5	7	1	61	4.6	2.8	1	19	324	342	324	346	0.83
6	7	0.0015	0.086	13.5	0.3	2	23	352	373	351	373	0.96
7	7	0.037	2.2	9.1	0.2	1	22	379	400	379	402	0.88

Sequence Information

Coding Sequence: ATGAATTTGCAATTGGAATTAAAAACGAAGCGAATCTGTCGTTTTTGTATGACTCAAAGTGAACCTCTTACAAATATATATTCAAAAGAAAATAGATTACAAAATTCATTACCGCTTCCATTACAAATAATGGCATGTGTGTCAATTGAGGTTTCTATAAATGATGGTATGCCAAGTATAATTTGTGATGACTGTCGTATTTCAATGGAACAATTGTATCGTTTTAAACAAATGTGTAAAAAATCGGATACATCATTACGACAATATCCATTAACAGGAGAATGGCCAAAACAATTAGAAATACCAAAAATACCAGAAGTATTAATATTAAAATTGTATCCTCAATTATGTCAAAAATTAAAAGTTGTTGCTGCTACTACACAAATCGTTAATAAGAAAGATCAAAATCAAAAAATACCAATAAAATCATATAATTTATCAAATTCAACACAGCAGCAGCAGCAGCCTTCAACAATTACAATAATAACAACAAATACATCATCAGCATCATCAACAGAAATAACACAATTACATCAACAACAACAGCAACAAAAACATCAACAACAATTAACAAGACCACCAATATTATTACATAAAAATTCAATGAAAATTCATACAGATCAACCTAAATTTTCATGTATTAATTGTAAAAAATCATTTTTATCAATAGAAGAAATGAATAAACACACAGAACATCATAGAAAAAATCATCAATTTGTTTGTAAAATATGTAATGAAGAATTTGCACTTAAACAAGGTTTAGAACGTCATCAAGCTGTACATGTTAAAGATCAACCATATCCATGTCAATATTGTGATTATAGTTTTCCAACACTATCAAAATTGACACGTCATTTAATAGCACATGGTAATCGTTCATTCCCATGTAAACTATGTCCAAAATCATATTTATTAAGTCAGCAATTAACACGTCATTTACGTTCACATAAACAAAGTTCATATGGATCATATAAATGTTTTGATTGTGAAAAAATCTTTTTAACTCGTGATTATTTAACATGTCATTCAGTTGTACATGCAACACAAACATTAATTTGTCCGTTATGTAAGGAAAATTTTGATAATTTAAATTCATTTACAGAACATATTAAAAATCATGCTAAAGGTGAACAATTTGCATGTGAATTTTGTGATTTAATTTTTATGACAGCTGAAAAACTTCAAATTCATAGCGATAACCAACATTCTGAAGATTTAGCTGCATATCATGAACATGATACAAAAAATAGTATTAATATTAAAAAAGAACAACGAAATTTTGTAACAGATGATTTACAAGAAAGTATAACTAATAATGAAGAAGAAGAAGTTATTGAAGAATATCATCATAATGATGACCAACAACAACAACAACAAATTCAAAATGAACAATCGATTATTAAAAAAAAAGAACATGGAATTGTTCTAGAAAAAGATATTATTGTTACAGCACATCAACAATCTATAAAAAATAATGATAATAAAAGAAATGCAGGAGGAGGAGGAGGAAGAAAACAGCAACAGCAAAAACAACAACAACAAAATTATCAACTAAAACAAGAATTTGTTAAATATAATAATGAAATTGGTATGGAAATTGTTGTAAAAGAAGTAAATGTTGTAAGAGAAGAATATATAATTGATGGAAAATACCTTAAGGACATTTTGATTGATAAAAATGATGAAGAATCACCACCAATAAAAATGATAAAATTAAACCCACAAGAAAATCAACAAAAAATATCAAATTCTCTAGAAAAAGTTAAAAAAAGTTTAAAAGAGAACAAAACAGAACAACAATCTCAACAAAATGAGAAATTAGTTAAAAGTGAAATTCAAAATGATTATAATTCATTAACAGAAATAAAGTCAAAGAAATCAGCTACTATTAATACAATTTTAAAACAATTACCGAAAACAGTTACAGTAACAAAAAAGGAAATTTTAACTGAAAAACTATCATTAACAGCAACAAAAAAGATACCAGATCGTATTTTAAATACTAGAAAATTAATTTCTAGTTCGAATAAAGATATAGAAAATAAGAAACCAATTAAAAATTTAAAACGAACAATTAATAATAACAGTAATCAGTAA
Protein Sequence: MNLQLELKTKRICRFCMTQSEPLTNIYSKENRLQNSLPLPLQIMACVSIEVSINDGMPSIICDDCRISMEQLYRFKQMCKKSDTSLRQYPLTGEWPKQLEIPKIPEVLILKLYPQLCQKLKVVAATTQIVNKKDQNQKIPIKSYNLSNSTQQQQQPSTITIITTNTSSASSTEITQLHQQQQQQKHQQQLTRPPILLHKNSMKIHTDQPKFSCINCKKSFLSIEEMNKHTEHHRKNHQFVCKICNEEFALKQGLERHQAVHVKDQPYPCQYCDYSFPTLSKLTRHLIAHGNRSFPCKLCPKSYLLSQQLTRHLRSHKQSSYGSYKCFDCEKIFLTRDYLTCHSVVHATQTLICPLCKENFDNLNSFTEHIKNHAKGEQFACEFCDLIFMTAEKLQIHSDNQHSEDLAAYHEHDTKNSINIKKEQRNFVTDDLQESITNNEEEEVIEEYHHNDDQQQQQQIQNEQSIIKKKEHGIVLEKDIIVTAHQQSIKNNDNKRNAGGGGGRKQQQQKQQQQNYQLKQEFVKYNNEIGMEIVVKEVNVVREEYIIDGKYLKDILIDKNDEESPPIKMIKLNPQENQQKISNSLEKVKKSLKENKTEQQSQQNEKLVKSEIQNDYNSLTEIKSKKSATINTILKQLPKTVTVTKKEILTEKLSLTATKKIPDRILNTRKLISSSNKDIENKKPIKNLKRTINNNSNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -