Bmaj015100.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- -
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000407.1:134672-141749[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.058 3.4 8.5 1.7 1 23 1221 1244 1221 1244 0.95 2 13 0.47 28 5.6 4.0 1 23 1378 1400 1378 1400 0.95 3 13 0.00034 0.02 15.5 2.7 2 23 1403 1424 1403 1424 0.97 4 13 0.00076 0.045 14.4 1.0 1 23 1430 1452 1430 1452 0.96 5 13 5.8e-05 0.0034 17.9 8.1 2 23 1459 1481 1458 1481 0.95 6 13 8.2 4.8e+02 1.7 0.0 5 23 1494 1512 1492 1512 0.95 7 13 0.017 1 10.2 4.4 3 23 1519 1540 1517 1540 0.95 8 13 0.035 2.1 9.2 0.2 2 23 1551 1571 1551 1571 0.96 9 13 1e-05 0.00062 20.3 0.8 1 19 1577 1595 1577 1599 0.95 10 13 0.0059 0.35 11.6 0.2 1 23 1607 1629 1607 1629 0.98 11 13 0.00026 0.016 15.9 7.5 1 23 1635 1657 1635 1658 0.96 12 13 0.00035 0.021 15.5 6.3 1 23 1663 1685 1663 1685 0.99 13 13 0.016 0.94 10.3 5.6 1 23 1691 1713 1691 1714 0.93
Sequence Information
- Coding Sequence
- ATGGTAGAACAAACACCTTGTCCGGTATGCACATTATATTTGCACCCGGGTATGAGTTTAGCAGATCATTTAGAAACTCATCCAAAAGAGCAAGTTATAAAAGCACttgttgcccttgctgccaattcatcatcacctttattgtcaagtgggccaatagcgacaggagcaataaaggcaacatcaacgacaacaacaacaacaacaacagtcgttccaactgcaatacataaatctcaaccagataattttccatttcatacaccacctccaccaCCCCCGTTGGTTCAAAGAGGATTTCCTCAATTGCCAGGATTATCATCTTCATCGTCATCTAATACTGATGCTTCTGGAATTAATAATTCTAGGGAATCTAAAAATGGATGTATATCTTCTACCCAGAGAAATTTAATGATCGTGAATAGGCAGAGTACAGTACAGGTGTACCAGGCTGGTGATCATAATCAGAATATTTTAGGACAACAGTTAACATTAGCTCCTCCACCATTACAGCTTTTCAATATATCATCACACAATCAAGAAAAATTTCTAACACCACCTCCAGCATATGGAACTGCAGTTAGCCAATTAAGGTCTAACCAAAATAATCATCGGACCTACTCTCATCATAATCAAAGTCAATTGGATAATTCTTCAGCGTATTGCAACATCAGTGATACATCTGATCAAAGTGCATTAGATTTCACTATAACAAAAAATCTATCAAAACAACAGAATTCATCTAAACAAAATTCACAACAGTTACAGCAGTCATCTTCGGCTCAAAAATTCCATGGTCcatcaacatcatcattatcatcgttgtcaacattttcaccgtcgagaatttcaaatcCACCTAGATGCCGTTCTCTATCTTCTTCTCCAAGACTTAGACCGTCACCATCACCTTCTCCATCAGTTTTAAGATATGCTGAAAGTCCTATAGCTGCACATTATGTTGAACGTGAAAATGGTGATTTTATAGTACAAGAAACACCACGTCATTTAGTAGAATGCGTCGAAAAAGATGATGGAGAATTTTCTGTAGTTGAAAAAGTAATTTGTTCACCACCAAGTGTTCTTCAATTtcatgatagtaatgagtttgaaacagaagaagattcatttaaaaaagaaattcaacaacaccagcagcaaatgcagcagcagcagcaacaacaacaacaacaactactacaactacatcatcatcaacagcaacaatcacagtctcattcttctgacgatgaaaccatcggtagTGAAAATACAATGGAAAGTCAGCAACAGAAACCTAATATAAATCATAATGATGAGACAAAAAAAGAGATAGAGCAAATTGGAAGCCCAAAACAGAAAAAGACTGTTTCAGGATTGACAGTGATTAGTAATGTAAAATTAAATCCCAACGAGTCATTAGATTTAATGGAAAATATAATGGCATCTAGTAATAATAATGAAGTGGAAGTATTTTGGAGTGGAATAGTTAATCCAATTATAGAAAAAATTGAAAATGAAGAAAAAGAACGTTTTGAAAATAATAAAAATAATAAAAATGAAGAACAACAAAGAATTGATAGTGGTAATTCATCAAAGTCATCGAGTCATCATGAATCTAAAATTCAAAAAGCGTTTACGAAAAAAGAAAAAAATATTCCAGATATTGAAATGAAAGAAGTGGAGGGAATAAAGAAAACGACTAATTTTACAGTTTGTAACGATAGTTTTCAACTGTTGCATCCAACTATGTCATCATCATCATCTTCTTCTTCATCTTCAGTAACAACAAGTGTTATACGTTTAGCACCTACTCCCATTACTATTCCAAGTACAATCGAAATAACAAAAATATCACCAGATCAGAAAAAATCACGAACAGTAGAAAATTTAAATTCTATTAAAAAAGAAAATGAGAATAAAATACAAATGACAATTATTCCCTCTACTTCTTCTAGTTTTTATAAATCAAATTTCTCACGAGATACAATGAAAAAACCACCCTTCAGAAAAACTCCAAAAAAATTAATAGTTAAATTCAAAAATGCACCTGTCACTATGAATATAGATGATGCAAGCAATACAACACAGATTACGACTGTTAATGAAAATGAAATTAAAGAAAACTCTTCCAACAAAGTCACAAAGCAGGATAAATTACAGGATATTAGTTCAATTCTAAAAATTGAAATGAAAGAAGTCGATAAGCACAATAGTCCAATTAAATGTAAATTAGAAAATTTTCAACAACAGAAACATCAAAAACAGCAACAAGATGTTGAAATTAATGGGAATAAATTAAGTTCATTTTTAGAAGAATCAGATAAAACAGTAATCGAAAGAATGGATGATGGTGATGAAATAATTGAAGCTAAAAAAGAAAAAGACAATGAAAATGAATTAGATGTTGTCGTTTCTGTAATAGCACCTCAAATACCAGCAATACAACCAATGATCGTTTATGAATCATCATTGATAGAAGAACCTACTATTGAAGATGAAGGCAATAATAATTCTAATAATGGTAATACGACAACTGTAATTCATTCTGAAGATAAATATCAAAATCTTTCAAAATTGCTTGACAATTGTTGGAAAAATAGTTCAGAAGAGGAAATTAAAGCAAAACTGAATAAAGAATTAAGTTCTTCGGAAAGACTTGAAAAAGTGTTCACTGAAGTAGCAGATGTTTCTTTAGATAATAATTCATCTGGTGTAAATTCTTTACAAATAACTACCGAAATTAGTATTAGCAGTAATAGTAGCAATATTGAATCTCCTCACCAATCACAGCTAGCTAGTGGTGCAAGTGTattatcattgtcttcatcatcatcatcgttatcaccatcagcgttatcaccatcgactattacaacattgaattcatttccatcaacatcaAACTTTTCAACTACTTCTTCAAAACCATCGACTAGTTCCTCAGTTTTACAACAGATTGAACAACAGCAACTAGTTCAAAATCCGCATAATTCTTCACAATTACCAGCTACAACTTTACCATCGGTACTGTTATCATCTAATTACGATTATCCTTTCAGTTTTTTATATAATAATAGCGGTAATATTGATAAAAATCGTTTATCACCAATATATCCCACTGAATTATGGAAAGCAAATTATAATGCACCAATATTTCAAGCACAAACAACAGCTGCTGCTGCTGCTGCTGCAGATTTTCAAGATATTGAAGAAAGAGAAAGAAGTAGTTATATTGATTTAGATGCATTAAAAAAAGCAAATAGTTCTGATGCAGTTCAATATTGTGAAGCATTAAATATAAGAACCGATGAAAAAATGCCAGCTAAAGGTGAAATATCAGAGCAAGAAAGTAATGGAGATATTGAAAATTCTTGGAGTCAACCGTTGGGTGGTGGTGAACAACAGCCTTATCGATTCTTCAATCATATCGAGAATTATGTTGCAAGAGAAAGTTGGAGTGATGAAGGATTTATTTGCTCACAAACTGTTGCTGAAGATATTAAACCAAAGCCTTCATTAATTCCACCATCATCAAGTGGAGAATTTTCTGAAACTCAGGGATCATCAAGAATCAAAAAACCACGAAAACCAAGAAAATTAAATAATAATAATAGTACTAGCACTAGTACCAGCGGAGCTATTAAAAAGACTAAAATATTTACATGCGATCATTGTCCTAGCACATTTTCAAAATTAAAAGATAGAAATTTGCATTTAATTGTACAACATGATTATAAAAGAgttaatcgtcgtttagttcgtgaaccaccgtcagcaacaataacatcagctgaacaagaacaacaacaacaacaacaacagcagcaacaacaacaatatcaattaccattacaacattatcaatatgaatttgatcaaattgtattacaacagcaagatgataatcatcaacaatctttaggtgttacaattgcaacagAAGATATTAAACCTGATACAAGTGTTGCTGCTGTTTCTTCAACATTAGAAACACCACAAAATTTTCCAAGAGCAAAATATGATTCAATACGTGCCGGAGTATATCGTATGTTAATGAATTTTAATTTTACTGTATTAAAAGAAAAACAAAATATTGATGTTGATGAGCATATGCTTGAATCGAAAACATTTTGTTGTTTTACATGTCAAAAAGATTTTACAACTGTAAAACAATTTGATGAACATTTAATTAATCATCCAGCTGAATGTTTTACATGTAATAGAAAATTTACACGTTGGTCATATTTTTCAATTCATTTAAAACGTCATTTAGGATGGAAAGATTTTGAATGTATACATTGTAATAAACGTTTTGTAATAAGAAGTGCATTAGTTGAACATATGCGAATGCATACTGGTATTAGCCCATTAAAATGTAAACTATGTGGAAAATGTTTTAAACGTTATTCAAATTTAACACAACATAAACGTTTATGTCATAGTACACGAAGTAAAAAGAAAAAAGAATATGTTTGTTATTGTGGTGAAGTTTTACCATCAAAAGCTCGTTTTTTATGGCATCGTGAAATTCATGATACAAAACCAAAATGCTGCCCATATTGCAGAGATCGTTTTATACACTCAAACAGTTTAAGACGTCATATTCGCTTAGTTCATTCTGATAAATTTATATATGAACAACCAGCGGAATGTCCTATTTGTAATCAGGTATACGCTAAAAATAGTTTAAAAGGACATATGTCAACACATTCAATGGATGCACAACATGAATGTCCAatatgtaataaaacatttagcacaaaatggaatttaaaaattcatagttgggtacatgcaaatcgtacagcaaaaccatataaatgtgacatgtgtattaaagcatttgtacgtgaaattgattataaaaatcatataaatgctcataaacaaataaaaccattcacatgtgaatattgtggttgtaaatttataagaaaatataattatttacgtcatcgtagagaacatcatggacaaaaaaaattccgttgtgaattatgtggtaaacaatttcatagacattattatttaattgaacatcgaagaacacatactggtgaaagaccatttttatgtacgatatgtggtaaaagttcaacaacaaaaACAAATCATAATAAACATTTAAAAATACATCATTCAAGAGATCCTTTCACATCGGAAACATAG
- Protein Sequence
- MVEQTPCPVCTLYLHPGMSLADHLETHPKEQVIKALVALAANSSSPLLSSGPIATGAIKATSTTTTTTTTVVPTAIHKSQPDNFPFHTPPPPPPLVQRGFPQLPGLSSSSSSNTDASGINNSRESKNGCISSTQRNLMIVNRQSTVQVYQAGDHNQNILGQQLTLAPPPLQLFNISSHNQEKFLTPPPAYGTAVSQLRSNQNNHRTYSHHNQSQLDNSSAYCNISDTSDQSALDFTITKNLSKQQNSSKQNSQQLQQSSSAQKFHGPSTSSLSSLSTFSPSRISNPPRCRSLSSSPRLRPSPSPSPSVLRYAESPIAAHYVERENGDFIVQETPRHLVECVEKDDGEFSVVEKVICSPPSVLQFHDSNEFETEEDSFKKEIQQHQQQMQQQQQQQQQQLLQLHHHQQQQSQSHSSDDETIGSENTMESQQQKPNINHNDETKKEIEQIGSPKQKKTVSGLTVISNVKLNPNESLDLMENIMASSNNNEVEVFWSGIVNPIIEKIENEEKERFENNKNNKNEEQQRIDSGNSSKSSSHHESKIQKAFTKKEKNIPDIEMKEVEGIKKTTNFTVCNDSFQLLHPTMSSSSSSSSSSVTTSVIRLAPTPITIPSTIEITKISPDQKKSRTVENLNSIKKENENKIQMTIIPSTSSSFYKSNFSRDTMKKPPFRKTPKKLIVKFKNAPVTMNIDDASNTTQITTVNENEIKENSSNKVTKQDKLQDISSILKIEMKEVDKHNSPIKCKLENFQQQKHQKQQQDVEINGNKLSSFLEESDKTVIERMDDGDEIIEAKKEKDNENELDVVVSVIAPQIPAIQPMIVYESSLIEEPTIEDEGNNNSNNGNTTTVIHSEDKYQNLSKLLDNCWKNSSEEEIKAKLNKELSSSERLEKVFTEVADVSLDNNSSGVNSLQITTEISISSNSSNIESPHQSQLASGASVLSLSSSSSSLSPSALSPSTITTLNSFPSTSNFSTTSSKPSTSSSVLQQIEQQQLVQNPHNSSQLPATTLPSVLLSSNYDYPFSFLYNNSGNIDKNRLSPIYPTELWKANYNAPIFQAQTTAAAAAAADFQDIEERERSSYIDLDALKKANSSDAVQYCEALNIRTDEKMPAKGEISEQESNGDIENSWSQPLGGGEQQPYRFFNHIENYVARESWSDEGFICSQTVAEDIKPKPSLIPPSSSGEFSETQGSSRIKKPRKPRKLNNNNSTSTSTSGAIKKTKIFTCDHCPSTFSKLKDRNLHLIVQHDYKRVNRRLVREPPSATITSAEQEQQQQQQQQQQQQYQLPLQHYQYEFDQIVLQQQDDNHQQSLGVTIATEDIKPDTSVAAVSSTLETPQNFPRAKYDSIRAGVYRMLMNFNFTVLKEKQNIDVDEHMLESKTFCCFTCQKDFTTVKQFDEHLINHPAECFTCNRKFTRWSYFSIHLKRHLGWKDFECIHCNKRFVIRSALVEHMRMHTGISPLKCKLCGKCFKRYSNLTQHKRLCHSTRSKKKKEYVCYCGEVLPSKARFLWHREIHDTKPKCCPYCRDRFIHSNSLRRHIRLVHSDKFIYEQPAECPICNQVYAKNSLKGHMSTHSMDAQHECPICNKTFSTKWNLKIHSWVHANRTAKPYKCDMCIKAFVREIDYKNHINAHKQIKPFTCEYCGCKFIRKYNYLRHRREHHGQKKFRCELCGKQFHRHYYLIEHRRTHTGERPFLCTICGKSSTTKTNHNKHLKIHHSRDPFTSET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234268;
- 90% Identity
- iTF_00234268;
- 80% Identity
- -