Basic Information

Insect: Bombylius major
Gene Symbol: -
Assembly: GCA_932526615.1
Location: CAKOBF010000035.1:1723032-1725048[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.38 22 5.9 0.8 1 16 255 270 255 272 0.85

2 9 0.00017 0.01 16.4 0.2 2 23 284 306 283 306 0.95

3 9 0.0013 0.077 13.7 0.3 1 23 313 338 313 338 0.96

4 9 0.00013 0.0079 16.8 0.4 1 23 353 375 353 375 0.96

5 9 1.6e-05 0.00095 19.7 2.4 1 23 381 403 381 403 0.99

6 9 0.0029 0.17 12.6 0.2 1 23 409 431 409 431 0.97

7 9 0.0031 0.18 12.5 2.6 1 23 437 460 437 461 0.96

8 9 7.4e-06 0.00044 20.7 2.3 1 23 466 488 466 488 0.98

9 9 2.6e-06 0.00015 22.2 2.0 1 23 494 516 494 516 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.38	22	5.9	0.8	1	16	255	270	255	272	0.85
2	9	0.00017	0.01	16.4	0.2	2	23	284	306	283	306	0.95
3	9	0.0013	0.077	13.7	0.3	1	23	313	338	313	338	0.96
4	9	0.00013	0.0079	16.8	0.4	1	23	353	375	353	375	0.96
5	9	1.6e-05	0.00095	19.7	2.4	1	23	381	403	381	403	0.99
6	9	0.0029	0.17	12.6	0.2	1	23	409	431	409	431	0.97
7	9	0.0031	0.18	12.5	2.6	1	23	437	460	437	461	0.96
8	9	7.4e-06	0.00044	20.7	2.3	1	23	466	488	466	488	0.98
9	9	2.6e-06	0.00015	22.2	2.0	1	23	494	516	494	516	0.98

Sequence Information

Coding Sequence: ATGGAAATTGTTTGCAGAACTTGTTTGGGAACAATATGTAGTAAAAAATATGATTTTTTCAGAACATCTCATTTGTCGCAATGGTTGAGTGTTTGTGCATCAATAACAGTTCAAGAAGGTGATGGGCTAACAAGATACCTATGTTCTCAATGTTTTTCTAAAATAGAGGATTTTTATGAATTTCGCACAATGTGTGTTGAATCTGCACAAAAGCTTCATCAAATGCTTAGTAATAATTTTATAGACGGTGTGAAAGATGAAATTATATTCGAAATCCATAATATAGATGATGCCGATGATAATAAAATTAATAAACTTACAAAAAATGAAAATTTCAAAAACCAACAATCATTCTTAAAAGAAGAAAAACAGAGCCAAATTAGTGCGAGTGTTGTAAATGAAGTAGGAGATTTTTACAATGAAGAAAAAATTGTCGAAGCCAACTTAGATGTTTTATGTGAAGAAGGTGAAAAATATGCAGGAAATAATGGAGAAACTAGTTTGTTAGAATCAGATGAAGATACAATAAATTGTGATAGTTATGTAAATAACGATTTAGAAGGATATGGTACTGGCAGCTGTAGTAATGATGATTTTAATCTTGTAGAAGCAGACAACGAAACTAATGATGAAGTTGATCATGATGAAAAAAGTCGAAAAATCCACAAAAAACACGGAATTAAAGATATTTGCAATAAAAAAAACTGGAAAAATAAAGTTAGTGATGATGAGAGTGGGAAGAAAATTAAAGACCAAGAAACATTCATTTGTCAAATATGTAATAAAAGATATTTTAAAAAAGAAAAATTTGAAGCCTGTGTAAGATCTCATAAAGGACTAAAGCCATGGGTTTGTGCAGAGTGTAAAAAAGAATATAGAAAGAAAGCATCATTAATAAATCATATAAAGTATGAGCACAAAAAAAATTGTGAAATGTATGCTTGTCCAGTTGAAGGATGTGATAAGAAATATAGGCTCAAGCAAACAATGCAAGTACATTATAGGCGTATTCATATTAAAGATTTAACAATGAAAGATTCCAGAAAAATAAAATTGTACATTTGTGAACAATGTGGAAAATCACTGAAAACATTAAATGCATTAAATCAACATCGTTTTATTCATACTGGAGATTTTCCTTATAAATGTGATGAGTGTCCAAAACGTTGTGGTACTAGATATCAACTGGAAGTACACTTGAAACGTCACAAAGGTATTAAGAACTATATATGTCCAATATGTGGGTTAAAAAAAATAACCCAACAAGAATTAAATACACATATCAATTATCATTCGAGAGATAAGACTTTTACATGTAAATTATGTCCATATACTTCATGTAATAACGGAAATGTTGTACGACATGAAAGAATTGTACATCACGGTATTAAAACTTTTGAATGTAGATTTTGCGGTAAAACATTTGGAAAAGCAGAGACATTAAAACATCATATAATGACGCATACTGGAGAAAAACCACATCAATGTAATTTATGTGGTAGACGTTTTATTCAGCCAACAGCCCTAAAAACACATTTAAAACGTCATGATAAAGCTACTACAATATGTACACAAGTCACCGAGCACTCAGCACCGAAATTAACGACGACGCAAATGACAACTGAAAATATtattaaaactgaaacaacagaacaagtatcaatgttgcatgtattattttattcccaatttaCAGTTTATAGCGAACTCCCAATTTAA
Protein Sequence: MEIVCRTCLGTICSKKYDFFRTSHLSQWLSVCASITVQEGDGLTRYLCSQCFSKIEDFYEFRTMCVESAQKLHQMLSNNFIDGVKDEIIFEIHNIDDADDNKINKLTKNENFKNQQSFLKEEKQSQISASVVNEVGDFYNEEKIVEANLDVLCEEGEKYAGNNGETSLLESDEDTINCDSYVNNDLEGYGTGSCSNDDFNLVEADNETNDEVDHDEKSRKIHKKHGIKDICNKKNWKNKVSDDESGKKIKDQETFICQICNKRYFKKEKFEACVRSHKGLKPWVCAECKKEYRKKASLINHIKYEHKKNCEMYACPVEGCDKKYRLKQTMQVHYRRIHIKDLTMKDSRKIKLYICEQCGKSLKTLNALNQHRFIHTGDFPYKCDECPKRCGTRYQLEVHLKRHKGIKNYICPICGLKKITQQELNTHINYHSRDKTFTCKLCPYTSCNNGNVVRHERIVHHGIKTFECRFCGKTFGKAETLKHHIMTHTGEKPHQCNLCGRRFIQPTALKTHLKRHDKATTICTQVTEHSAPKLTTTQMTTENIIKTETTEQVSMLHVLFYSQFTVYSELPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00235291;
90% Identity: iTF_00235291;
80% Identity: -