Bmaj013465.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- -
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000308.1:135185-149073[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0014 0.085 13.5 3.0 1 22 515 536 515 536 0.96 2 19 2.7 1.6e+02 3.3 4.2 1 23 568 591 568 591 0.90 3 19 0.003 0.18 12.5 1.4 1 23 683 706 683 706 0.95 4 19 0.00017 0.01 16.5 1.8 1 23 718 740 718 740 0.95 5 19 1.3 79 4.2 0.4 1 20 770 789 770 791 0.93 6 19 1.1 65 4.5 5.4 1 23 972 994 972 994 0.96 7 19 0.11 6.3 7.7 0.6 1 23 1113 1136 1113 1136 0.97 8 19 0.0067 0.39 11.5 1.2 1 23 1145 1167 1145 1168 0.90 9 19 1.3e-05 0.00074 20.0 1.3 2 23 1221 1243 1220 1243 0.97 10 19 0.00089 0.052 14.2 0.9 2 23 1271 1292 1270 1292 0.95 11 19 0.0074 0.43 11.3 3.1 2 23 1362 1384 1361 1384 0.97 12 19 0.036 2.1 9.1 3.4 1 23 1407 1430 1407 1430 0.95 13 19 2.8e-05 0.0016 19.0 1.6 1 23 1442 1464 1442 1464 0.99 14 19 0.004 0.24 12.1 5.8 1 23 1528 1551 1528 1551 0.97 15 19 0.26 15 6.5 6.9 1 23 1566 1588 1566 1588 0.98 16 19 0.0045 0.27 12.0 1.8 2 23 1652 1674 1651 1674 0.95 17 19 0.0077 0.46 11.3 0.5 2 23 1747 1769 1747 1769 0.96 18 19 0.0094 0.55 11.0 0.2 3 23 1805 1826 1804 1826 0.97 19 19 0.00016 0.0093 16.6 2.8 1 23 1880 1902 1880 1902 0.96
Sequence Information
- Coding Sequence
- ATGGATGTTAGAAAAAAATTTAAAGAAATATGCCGTTCATGTATGAAAAAAGAAAAAGCTATGAAAACAATATTTAATTCAGAAATAAATTCTATACCAATATCACAAATGTTATCATTTGCAACATTAATTAATGTTAGACCAGATGATGGTTTACCATCATCAATATGTTATATTTGTTTAAATCGTTTAATTGGTGCATATAAATTTCAACAAATGTGTGTTGATTCTGATATATTAATGCGTGCACAATTAAAAGATTATTATAAAAAAATTAAAACAAAATTAACAATAACACAAAATATATTAGATGAATTACGTTCAAATGTTATTGATGGTTTACCAAGTGATTCATTtgatgaagatgatgataataaagatatttatgaaataacatctgtatcatcatcattaatatcaacagctgataatcataataatgatgataataatgataatgataatattaataatcatttaaataatgatcatgaattatttaataataaaaatggtttaataacaacaacaaaaaaagaaacattaaAAAATTCATCTAGAAAAATGTTAATTGATGAAAAATCAACAACAAATATACAACAACAATCTGAAGATAATGATATAGTTATAAAAATTGAACCAGATATTGATATTGATGAAAATCTAGAACAATTACAAAATGATGATAATCATAAAAATAATACTACATTAGATTTTATGAAACAACAACAAGAAGAAAATTTAAATGAAAATAATAATAAAATTAAACAAGAATATGATGATAAAGATGAAGAAGTATTATTTACAGTTATGACAAAAGGTGATGGTACTGAAGATATaacaacaacattaaatcaagaacaacaacagcaacagcaacaacaaaaatcaattaatttaatacgaaaatcattaccaaaatcatcatcatcatcatcatttttatcttcaaatatatcaaattcatcatcaataattacaaataataattgtacatcaattccaaagatatcaaatgcaatttctttagctccacaatctttagctcaacaacaacaacaacaacaacaaaattgtatatcattaccatcatcatcaaaatcacaacaacaacaacaaccacaacactgcctatcattaccatcatcatcatcatcatcatcatcaaaaacattacaacaacaacaaaatcgtcaatcattaccatcatcatcatcaacattacaacaacaacaaaatcgtcaatccttaccatcatcatcatcaaaatcaacaacaattattgataatctttcaacaatatcttcaATTTATAAAAGATCATCAAATCCAAATCCATATAATAGTAGTAATGTTGGTATTTCAATTTCATCAAAATCAATACCAATAACAGCTAAAACAAAAGCATATTTAAAAAATTCAACAACATCAACAATAACTAAAACAAAACAAATAACATCAAATATAAAATCAACAACAGTCATAAATTGTAATAATGAAATTGATAAAGATGATAATGAAGTTAAAATGAAAATTGTTGCATATGTTTGTAATGTTTGTAAAAAGGTATTTACAGATAAAAATTGTTTTGTAACTCATAAGAGAACGGAATGTCCAAGACTACAAAATTCAATTTCTATGGATAAAGAAGAATCTAATAATGTTTCTAAAAATTCAGATGATTTAAATTTTCGTATTATTCATAAATGTATATTATGTAAAACTATGTATAAACAAAAATGTGATTTAGAAGTGCATATTTATTTAAAACATAAATCAAAAGCTTATCAAATTATAAATCGAGAGACACAGAAAATACCAGAATATCGAGTTATTATTTCGTATATACCAGTGAAAAGATTCAATGAGCAAAACAGTTCAAGAAATCAAATTTATAAAATTGAAAATTTTGGTCATGATATTATTTatattgatgatgatgataatagaacatcagtaatatctaaaacagcaataaaaacaacaacaacagcatcatcatcatcatcatcatcaaaatctaATCCACTCATAAAAAATTTTATTCATCAATGTAATATATGTAAAAAATTATTTTCAAATTTATCAATATTGAATAAACATATTATAAATGAACATCAAATAATAACTCCTTCAAAATCAAATCAATTACATGATTGTAATTTATGTAATAAAACATTTGAAACATTAAATGATTTAAAATCACACATTAATGAACATCAAATAAAAGTATCATATGGTACTGATTCCAAATCAGCAAATCCTTCACTCAATGTGAGTGTTGATGTACATACAAATAATAATTCATATACTTGTCAATATTGTGAAGGTGAATTTAATTCAACAAGTGAAATTCATGAACATTTATCACAACAAAAATGTAAAAATTTTCGTACATCAATAAAATCAATATCTAGTCaaattatgacagttaatgataatgatgatgatgataatgatattcaatatcaacgacaacaacaacaaaaaccatcaacatcaaaatcacaaaatagaaatacaacaacatctgtaacagacgatattattgattatattgatttagaaaatttagataatgaatttactgattcaattgaaatcaatgatgatgataatgatgatgatgatgatagtgatgatgaagatgaaatTCCACAAATTGTAATTACAAAAAAAACTAAACCAGGAGAAAGTATTCTCAAGAGAAGGAGATTGGAAAATACTGAGATTCCACACTCTAGATCATATTTAAATAATTCCCAACACAATAATGATGATGATAATATTTATATTGAAAATGAAAATGATTTATTATCAGAAAATGTTGCAAGATGTTCAAAAAATTCAAAAACAAAAACTTTTGCTGAAAATTATCAAATTTTTGTAGAAAATGATAAAACAAATTCATCTTATATGTGTCACATATGTCGTAAAATATGTTATAGTTTTAATGCATTAAAAGAACATAATCAGTATCATCAAAGTAGAAAAAATAAAAATTTTTCATTCATTCATACAAAAAAACAGCAATCACCTACAGAAGTTACACCATTTTCATTACCAGAATCAGAAATACGTCCTAATAAATGTGAAGAAAATTATGATGGAGAATTTGTTGCTATTGATGATGAAAATGATAATTTTAAAATTGAAAAAGAAAAAATTGAACCAGTTGAAGAAATATTAATGGAAGAAGATCCAATTAATATTGAAGAAGATCCAATTGACATTAGTCAAGAAGAGATAACAATACCAAATTTACATTATACAAGTGATAATAATGATAATTCAAATAATTCTTCTACAATGGATCAATCAAATAAAAAACAAAAACATCAATGTGATGTATGCGGATTATTTTTAGCAACTTATCAAGGAGTATTAAGACATCAAAAAAGATGGCATGGAGATAAACAACCATTTTATGCATTTATGTGCATTCAATGTGGTAAAGGTTTCCGTAATAATGAAGCATATAATCGTCATACAGAAGCTCATCATACAATTAAAAAAGAAATTTTGACACCTGAAGTAATTAAAAATGAAGATATAAAATTCAACAATCCTAATTTAGATGAAACGAAGACAACATTTGAAAAGCCTAATTTGAATGAAACAAAGACAAAATTTGAAAATGAAGTTGCTGATATTAATATTAAGTGTAAATATTGTGATCGTATTGTTAATAATCGTTCCAATTTACGACAACATATACGGAGATATCATAACGAAAATTATGAAAAATATATTATGGAACAAATTCAAAAGCAAGAAAAATTAATTAAAAAAGAAAATGTAATAAATTTGAATTGTTGTGTTTGTGGTAAACAATTTGAAAGCAAAGAATTACTTTCACGTCATGTAGAAATTCATAGGAAAAAACGTCGTAATAAAGGATTTAGATTTGTTAAAAAGAAGAAATATTCAACACCACGAAATAATGATATGTCATTATTGGTACCATTAAAAAATCAAGATAAAACTGATAATTCAAAGATtaatgatcgtaatagtcgtatgagtataccatcaacatcatcatcatcatcatcattatcatcattttccttaaaaaatattaaATGTCCAATCTGTTGTAAAATTTGTACAAGTATAGATATGTTAAAACGACATATGAGATCTGTTCATATTATAAATGGACACATTAGAAAAGAGAACTTTATTATGGATAACATTGAAACACAGGGTATTCAATTTGAATGTCATATTTGTTCAAGTCGTTTTAATTCTTATGCAAATTTTGTAAAACATAAAAAAGCTTATCATTGTGGAAAAGAAAATTATGTTGAAGAAGCATGGTATCAATGTGAAACATGTAAAAAAAGATTTATAGTTAAATCAAATTATGAAGCACATAGAAAAATTCATGAGACAAATGCAATAAATAATTTATTAACAAGATTTGCATCAATAACATCAACATCAACACCAGCAGCAACAAATAATGATAAAAAAATTAATGATATAAAAGAATCAAATGAAAAAAAAGAATCAACAACACCAACAAATCAAGGAAATGAAAATAATGAAAAAGATTATCCAGAATTTAATGAACCGCATAGATGTGTTGTTTGTAGAAAAATATGTTCAAATCGTCAATCATTATCACGACATATGAGAAAAATGCATCTAAAAGATATTAGAGAAAAAGTACCAAAAGGTTCAAAAATCCATCAGTGTCATATTTGTACAAGGATTGTAACAACACCTTACAAATTAAAATGTCATTTACGTTCGCATACACCAGATGAAGAAGAATTACGTAATTTTGAACAAAGTAAACAATTAGAAAATGAAAAAACACCATCAACAACACCAATACCTAAAATTCAAAAACAAACAAAAAAATCTAAAATTGTTGAAAATACAAAAACTGATAAAGATAAAAAATATTCAAGTGGTAGAAGAAAAATTTTAACATTTCCATCATATTGTAAAATTTGTAAACATCCATATTCATCAAGTTATAATACACGTCGTCATATAATTATGGAACATCAAATTAAACCAAATGAAGTTATTCAATTTATTGGTACACGTAGTATACCAATTAAAGTAAATACATCACAACGTATGCGTTGTAAAATTTGTTGTAAATTTTTCCATAATATAAAAGCATATAAAAATCATATTTCATCATGTAAACCATACAGACCACCAATACAATCTGATGTAATTACAACTGATAAATTAATACATTCTGATACAGATAATGTATGTAAAATATGTGGTAATAAATTTTTAAAACCAGCTGATTTAAAACGACATTTAAATATGAAACATCGAAAAATAATTGAAGAAGCAAAAGAAAATGAAAATCAAGAAATAAATTCAACTGTTGATACTGATTCAGTTGCTGATACAGCTGATGAAGAAGAAAATAATGCATGTGAAATATGTGGTAATAAATTTTTAAAACCAGCTGATTTAAAACGGCATATAAATATGAAACATCGAAAAATAATTCAAGAATCAAAAAGAAAAATAAATTCAACTGTTGATACTGTTGATACGGCTGATGAAGAAGAATTGGAGGAGGGAACAACATCAACAGCACAACCACAGAATAAAAGGCCAAGATTAACATTGAATGAAAGTGTAACGGTACCAGTATTTATTTGTAAAATTTGTGGAAGAAAATTCAATAAACAAGTTCATTTATCTAGTCATCAAGAATACCATGATAAAGGTTACATTAGAAAAACAAAAGTTGGCTTAATATGTTGTAAAATTTGTAATAAATATATAAAAGAGAAAGTTACAATTTATCATTTTAAATTTTATCATGCATTTAAAGATGAAATTATTCAAAATGGTGAATTTAAAAAATATTTAGAAATTAAAAAAAATATGATAACAGCTGCTGAAAAACGTGATACTGAACAACAAGGAAAACAATTAAATCAAAATAATGATAATGATAATGATAATGGTGTAATTAATGAAAATTCATCAACAAATACAATTGATTTAAATGTTGAACAATTATTATCAATACCGTTAGTTCCAAAAAGAACACGTATAACACGACATAGTATATTTTTAGAAGTTAAAGATGAAAAAATTGATTATGATCAACAAATAGAAATAATTAAtaaaaaacaaaatcaacaagaagatgaacagttggattcaaatgatgaagataatgatgatgatgatgatgatgatgaagatgacgaaaatgaagaaaacatggcagaagaacaagaaaagacgttagagaaaaataatgagaaagatgagatgaatgatgaaCAGAATTTAAATGAGATCGAACAACAAAGTAATAATGTCATTGATGAATCTTCTTCAAAAAATATTCCAAAAATTGAAAAAACAATTGAACAAAATCTAGAAACCAATATAGAAACGGAACAGAATGAAAAATTTGAACATAAAATCGAAGAAGAAAAACAAACTGTTAATGAAATCGAAAATAAATCTCCAGAAATTGTTTCAAATTTAAAACCTGCTTCTGATGATAAAAAAATTAAAATAAAAGATTTAGATCTTTTATACAATAATTGTGGTGGTAATGAAACAAAAACAATAGAAAATCGTAAAACACCAATTGTTTTTGTTGAAAAATTAAAAACACCAATTAAAAAAAAACTTAATAAAAATAATGAAAAAGAAGATTATTTAAAACAAAAATCTGCGGAAAATGAAAATGATAAGAATTTTGAACAAATTTCTTTAGAAAAAACTATAACTAAAAATGATGATGATGATAGGAATGATGATAAACAAAACGATAAAAAAGAACAAATTTTTATTAAGAAAATTACAAAAAATGACGATAATGATGAACAGGAAAAATTAAATGATAAAAATGAAAAAAATTCCAATTGTGATGAAAAAGATAAAAAATTAAAATTAATTGAAGAAAATGATTCATTAGAAATTAAGAACAATACAAAATCAGATAATGATGATGAACAATTGAAAACAAATGAAATCATAACAGCTAACCAAGAATTGAAAAATACAAATGAGGTTATTGATGAAAATAAAATGAATGGCAAAGCAATAATTGATGATTCAAAAATTACCAAAAATGAAAATGATGGAAATTTAATGACTGAAAAGGAAGAAGCAAGAACTGATAATTAA
- Protein Sequence
- MDVRKKFKEICRSCMKKEKAMKTIFNSEINSIPISQMLSFATLINVRPDDGLPSSICYICLNRLIGAYKFQQMCVDSDILMRAQLKDYYKKIKTKLTITQNILDELRSNVIDGLPSDSFDEDDDNKDIYEITSVSSSLISTADNHNNDDNNDNDNINNHLNNDHELFNNKNGLITTTKKETLKNSSRKMLIDEKSTTNIQQQSEDNDIVIKIEPDIDIDENLEQLQNDDNHKNNTTLDFMKQQQEENLNENNNKIKQEYDDKDEEVLFTVMTKGDGTEDITTTLNQEQQQQQQQQKSINLIRKSLPKSSSSSSFLSSNISNSSSIITNNNCTSIPKISNAISLAPQSLAQQQQQQQQNCISLPSSSKSQQQQQPQHCLSLPSSSSSSSSKTLQQQQNRQSLPSSSSTLQQQQNRQSLPSSSSKSTTIIDNLSTISSIYKRSSNPNPYNSSNVGISISSKSIPITAKTKAYLKNSTTSTITKTKQITSNIKSTTVINCNNEIDKDDNEVKMKIVAYVCNVCKKVFTDKNCFVTHKRTECPRLQNSISMDKEESNNVSKNSDDLNFRIIHKCILCKTMYKQKCDLEVHIYLKHKSKAYQIINRETQKIPEYRVIISYIPVKRFNEQNSSRNQIYKIENFGHDIIYIDDDDNRTSVISKTAIKTTTTASSSSSSSKSNPLIKNFIHQCNICKKLFSNLSILNKHIINEHQIITPSKSNQLHDCNLCNKTFETLNDLKSHINEHQIKVSYGTDSKSANPSLNVSVDVHTNNNSYTCQYCEGEFNSTSEIHEHLSQQKCKNFRTSIKSISSQIMTVNDNDDDDNDIQYQRQQQQKPSTSKSQNRNTTTSVTDDIIDYIDLENLDNEFTDSIEINDDDNDDDDDSDDEDEIPQIVITKKTKPGESILKRRRLENTEIPHSRSYLNNSQHNNDDDNIYIENENDLLSENVARCSKNSKTKTFAENYQIFVENDKTNSSYMCHICRKICYSFNALKEHNQYHQSRKNKNFSFIHTKKQQSPTEVTPFSLPESEIRPNKCEENYDGEFVAIDDENDNFKIEKEKIEPVEEILMEEDPINIEEDPIDISQEEITIPNLHYTSDNNDNSNNSSTMDQSNKKQKHQCDVCGLFLATYQGVLRHQKRWHGDKQPFYAFMCIQCGKGFRNNEAYNRHTEAHHTIKKEILTPEVIKNEDIKFNNPNLDETKTTFEKPNLNETKTKFENEVADINIKCKYCDRIVNNRSNLRQHIRRYHNENYEKYIMEQIQKQEKLIKKENVINLNCCVCGKQFESKELLSRHVEIHRKKRRNKGFRFVKKKKYSTPRNNDMSLLVPLKNQDKTDNSKINDRNSRMSIPSTSSSSSSLSSFSLKNIKCPICCKICTSIDMLKRHMRSVHIINGHIRKENFIMDNIETQGIQFECHICSSRFNSYANFVKHKKAYHCGKENYVEEAWYQCETCKKRFIVKSNYEAHRKIHETNAINNLLTRFASITSTSTPAATNNDKKINDIKESNEKKESTTPTNQGNENNEKDYPEFNEPHRCVVCRKICSNRQSLSRHMRKMHLKDIREKVPKGSKIHQCHICTRIVTTPYKLKCHLRSHTPDEEELRNFEQSKQLENEKTPSTTPIPKIQKQTKKSKIVENTKTDKDKKYSSGRRKILTFPSYCKICKHPYSSSYNTRRHIIMEHQIKPNEVIQFIGTRSIPIKVNTSQRMRCKICCKFFHNIKAYKNHISSCKPYRPPIQSDVITTDKLIHSDTDNVCKICGNKFLKPADLKRHLNMKHRKIIEEAKENENQEINSTVDTDSVADTADEEENNACEICGNKFLKPADLKRHINMKHRKIIQESKRKINSTVDTVDTADEEELEEGTTSTAQPQNKRPRLTLNESVTVPVFICKICGRKFNKQVHLSSHQEYHDKGYIRKTKVGLICCKICNKYIKEKVTIYHFKFYHAFKDEIIQNGEFKKYLEIKKNMITAAEKRDTEQQGKQLNQNNDNDNDNGVINENSSTNTIDLNVEQLLSIPLVPKRTRITRHSIFLEVKDEKIDYDQQIEIINKKQNQQEDEQLDSNDEDNDDDDDDDEDDENEENMAEEQEKTLEKNNEKDEMNDEQNLNEIEQQSNNVIDESSSKNIPKIEKTIEQNLETNIETEQNEKFEHKIEEEKQTVNEIENKSPEIVSNLKPASDDKKIKIKDLDLLYNNCGGNETKTIENRKTPIVFVEKLKTPIKKKLNKNNEKEDYLKQKSAENENDKNFEQISLEKTITKNDDDDRNDDKQNDKKEQIFIKKITKNDDNDEQEKLNDKNEKNSNCDEKDKKLKLIEENDSLEIKNNTKSDNDDEQLKTNEIITANQELKNTNEVIDENKMNGKAIIDDSKITKNENDGNLMTEKEEARTDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -