Basic Information

Insect: Bombylius major
Gene Symbol: -
Assembly: GCA_932526615.1
Location: CAKOBF010000261.1:337838-340404[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.051 3 8.7 1.2 1 23 236 258 236 258 0.98

2 9 0.042 2.5 8.9 0.9 1 23 263 285 263 285 0.96

3 9 6.7e-05 0.004 17.7 7.5 1 23 292 315 292 315 0.97

4 9 3.2e-06 0.00019 21.9 0.4 1 23 321 343 321 343 0.98

5 9 1.6e-05 0.00095 19.7 2.0 1 23 349 371 349 371 0.99

6 9 7.9e-06 0.00047 20.7 1.8 1 23 439 461 439 461 0.95

7 9 2.4e-05 0.0014 19.1 1.5 1 23 467 489 467 489 0.98

8 9 2.7e-08 1.6e-06 28.4 0.8 1 23 495 517 495 517 0.99

9 9 0.0034 0.2 12.4 2.6 1 23 523 545 523 545 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.051	3	8.7	1.2	1	23	236	258	236	258	0.98
2	9	0.042	2.5	8.9	0.9	1	23	263	285	263	285	0.96
3	9	6.7e-05	0.004	17.7	7.5	1	23	292	315	292	315	0.97
4	9	3.2e-06	0.00019	21.9	0.4	1	23	321	343	321	343	0.98
5	9	1.6e-05	0.00095	19.7	2.0	1	23	349	371	349	371	0.99
6	9	7.9e-06	0.00047	20.7	1.8	1	23	439	461	439	461	0.95
7	9	2.4e-05	0.0014	19.1	1.5	1	23	467	489	467	489	0.98
8	9	2.7e-08	1.6e-06	28.4	0.8	1	23	495	517	495	517	0.99
9	9	0.0034	0.2	12.4	2.6	1	23	523	545	523	545	0.97

Sequence Information

Coding Sequence: ATGTCACAAGATATTTGCCGAATTTGTGAAGACGGTAATGCAAGTGATTTAAAAGATATATTCACCGATGAGGAGATAATTCACAAAATAACATCATGTGCCAGCGTAAATATTGAATTAAATGATCAACTTCCAAAATATATTTGTAATAAATGTGAAAATAATTTAGAAATTGCATATAAATTTAAAAAACAATGTGAATTAACTGATTATAAATGGAGAATATTTTTAGGAATAAATGATAAAGAAAATTTTCAATATATTCTTGATGAATGTGGATTAATTAATGATGAAATTGATGATGAAAACGTAGAAGAAGAAAATGAAGTGTTAGAATATTATTCAGATTATAGTTTTCAAGATGAACAACAACAAGAAATTGAATTAATAGAGAACAGTACAGTACAAGAAACTGAAGTAATAGAGAACACTACATTAGAAGAAACTGAAGTAATAGAAAACAATATAGTTCATAGTCCAAATGCAGAAAATAATGAAAATGATGAGTATATCATCGAAGAAGAATATCTTGAGACTGATAATGATGAATTAAAAAATGAAGATGATGAAGATACATTAGTAATTGTATATGTAAATTCGAATAGTGATTGTAGTCAAGAAGAAGATAATACCACACAGGATGAAGTGCTTGAAAATGAATTACATAATCAACCAAAATCAAATAATAATAAAAATTCAAAAATATTTAAATGTGATACATGTAATTTAGAATTAACATCATATTTAGATTATAACGCACACAAAAAATCTCATGGTAGTCAAAGATATCAATGTTTAATATGTTTAAAATGGTTTTCAAAACGTTTTCTTTTAAAAAATCATTCAATCATACATGAAAATAATAAAAAATTATATAAATGTAATAAATGTGATAATACATATTCACATCAAAGTAATTTATATCGTCATATTAAACATTTTCATAATAATTTACGGCCATTTACATGTGAAATATGTGGTGTAAGTTTTTCACGTTCAAATACATTCAAAATACATCAAGCAGTACATATAAATGAGAGAAATTATAAATGTGATATCTGTGAGAAAAGATTTAAAGTTTTATACTATCTTAAACTTCATGAAAAAACTCATTTACCAAAAGAGTTATTTAAAAAATCATCGTCTTCATCAAGAGCAGCAGTAAAACgtaaaaatcaaaataaaatttcatcatcatcttcatctagaacatcttcaaaaataaataatattgtatgccaatattgtggtaaattatcatcatctaggactatacatgtaaatcatatgcgtatgcatactggtgaaaaaccttttatatgtaaatattgtggtaaaagttttacatttcgtacatcattacgtgtacatgaatttgtacatactggtgaaaaaccatataaatgtaatatatgtggtatacaatttcgtcaatatggtcatttaaaaggtcataaattaatacatactggtttaaaaaattataaatgtgaatattgtgataaaagttttgcattaaaatcaaatttagtagtacatttaagaacacatactggtgaacaaccatatacatgtattatatgtaaacaaaaattttccgatttaaattcattcagacgacataaaaaaattcataataatgaTAATAAAGAATAA
Protein Sequence: MSQDICRICEDGNASDLKDIFTDEEIIHKITSCASVNIELNDQLPKYICNKCENNLEIAYKFKKQCELTDYKWRIFLGINDKENFQYILDECGLINDEIDDENVEEENEVLEYYSDYSFQDEQQQEIELIENSTVQETEVIENTTLEETEVIENNIVHSPNAENNENDEYIIEEEYLETDNDELKNEDDEDTLVIVYVNSNSDCSQEEDNTTQDEVLENELHNQPKSNNNKNSKIFKCDTCNLELTSYLDYNAHKKSHGSQRYQCLICLKWFSKRFLLKNHSIIHENNKKLYKCNKCDNTYSHQSNLYRHIKHFHNNLRPFTCEICGVSFSRSNTFKIHQAVHINERNYKCDICEKRFKVLYYLKLHEKTHLPKELFKKSSSSSRAAVKRKNQNKISSSSSSRTSSKINNIVCQYCGKLSSSRTIHVNHMRMHTGEKPFICKYCGKSFTFRTSLRVHEFVHTGEKPYKCNICGIQFRQYGHLKGHKLIHTGLKNYKCEYCDKSFALKSNLVVHLRTHTGEQPYTCIICKQKFSDLNSFRRHKKIHNNDNKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00234231;
90% Identity: -
80% Identity: -