Basic Information

Insect: Bombylius major
Gene Symbol: -
Assembly: GCA_932526615.1
Location: CAKOBF010000041.1:768638-773126[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.55 32 5.4 1.9 1 23 308 331 308 331 0.95

2 13 2.7e-05 0.0016 19.0 2.2 1 23 337 360 337 360 0.96

3 13 0.00043 0.026 15.2 2.7 2 23 367 389 366 389 0.94

4 13 0.0024 0.14 12.9 6.7 1 23 394 416 394 416 0.99

5 13 0.005 0.3 11.8 3.4 1 23 422 444 422 444 0.96

6 13 2.9e-06 0.00017 22.0 5.8 1 23 451 473 451 473 0.99

7 13 0.0012 0.069 13.8 0.0 3 23 481 502 480 502 0.95

8 13 6.9e-06 0.00041 20.8 1.5 1 23 505 527 505 527 0.99

9 13 6.4e-05 0.0038 17.8 0.1 1 23 561 583 561 583 0.98

10 13 0.0074 0.44 11.3 2.0 1 23 589 612 589 612 0.97

11 13 0.0025 0.15 12.8 2.9 1 20 618 637 618 641 0.94

12 13 0.038 2.3 9.1 3.2 2 23 647 667 647 667 0.98

13 13 0.0036 0.21 12.3 2.9 1 23 673 695 673 695 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.55	32	5.4	1.9	1	23	308	331	308	331	0.95
2	13	2.7e-05	0.0016	19.0	2.2	1	23	337	360	337	360	0.96
3	13	0.00043	0.026	15.2	2.7	2	23	367	389	366	389	0.94
4	13	0.0024	0.14	12.9	6.7	1	23	394	416	394	416	0.99
5	13	0.005	0.3	11.8	3.4	1	23	422	444	422	444	0.96
6	13	2.9e-06	0.00017	22.0	5.8	1	23	451	473	451	473	0.99
7	13	0.0012	0.069	13.8	0.0	3	23	481	502	480	502	0.95
8	13	6.9e-06	0.00041	20.8	1.5	1	23	505	527	505	527	0.99
9	13	6.4e-05	0.0038	17.8	0.1	1	23	561	583	561	583	0.98
10	13	0.0074	0.44	11.3	2.0	1	23	589	612	589	612	0.97
11	13	0.0025	0.15	12.8	2.9	1	20	618	637	618	641	0.94
12	13	0.038	2.3	9.1	3.2	2	23	647	667	647	667	0.98
13	13	0.0036	0.21	12.3	2.9	1	23	673	695	673	695	0.95

Sequence Information

Coding Sequence: ATGTCTACATTGGAATTAGATGTTCATAAGTATTGTCGAACTTGTGCAGAATTTTTCGAAGATTCGATTCTTATTCCTGCTTTTGAAGAAATTGAAATTACAACAAAAACAAATGATGAATTTCAATTGGCAGAGGAGATAAAACTTTTAAGTATACAGATTGAAAAAGATGATGGTCTACCACAAGGAGTATGCATCGATTGTGTAAAACATTTAACAAGAATCTACGAATTTCGTCAAATATGTTTTAAATCACAAAAAACATTGGAAGAGTATTTTAAAAATATAAAAGAGCCAGTGATTTCAAATGAACAATTGGATGATGTAAAAGAAGATATAAAATTTCAACTGTTAGCTGAAGAAATAGAGTATCTTGAATCTGATGTTGAAATGAATGACAGAGAAGAAAATTTAGATTCTTCAGACGATGTAGAACGTGGTTTTGCCGAGTTATTTGATGCTTTAGATGGAACAATGGAATTTGATGATGATGATGTTTTGAAAAATAATAACGGAAACAACGGTGATCCAATTGTAACAGATTCTGCATATGCAAGTAATACAAATTCATCAAATGTGAAATCAGTTGAATCAGAAAATAAAGTTCAATGTAATGAAACAAAACTAGCAACAGACGATGATAACAACAAGCAGGATGATTCAAGAGCAAATGAAAGTTTATTAGACTCAGAAATCAATAAATCAAAAAAGACTGTTGACGAAAATGAAACCGAAAAGCGATGGTTCCAAACAAAAAAAAAACGTCGATATAAAACCAAGATAGGAGAACCAACTGATAGTGAAAGTAAATTGACATTAAGAAAATGTTTACATTGTAATTACTATAAATTTTCATCAAGATTTAAATCAGATATATTATCGTGTAGGAATCGTAAAATAAAAGCTCCATCTGATACAGAATTTTATTGCTTTTATTGTTATGAAAAATTTGATATGGAAAAAGTATTTGAAGATCATATGACCAGTACTCATACAATAGAAGAACCATACAATTGTAAAATGTGTGAGAAAAAATTCAAAAATTATAATTTACTTCGAAAACATATTGAAAGTTTACATGATGGTGATGTTTCAAAAAAATGTCGTTTTTGTGAAAAAATATTTCCAAGTAGTTATCATTTACGGAGGCATAAGGAAGTTATACATTGTAAAAAAAGTTATGAATGTAAAGTATGTTTAAAAAAATTTCAAATAAATAGTCATTTTCGACATCATATTAAAACTCATGATGAAAAAAGACAATATAAATGTAGATATTGTGATAGAAGATTCAATCAACGACCGCATCGAACCTTACATGAAGAAATTCATACAAATACTGATAATCCATATAAATGTGAAAAATGTGGAAAGACGTTTGTTCATAGCTATTATTATAGGACTCATTTAAAAACGCATGATGGTTCAACATTAAACATATGTGAAGTATGTGGAAAAGGTTTTCCACTACAATATTTATTAAATGGTCATATTAAAGGAGTACATGCGCAGTATCAGTGTGAAATTTGTGGAAAGAAATTAACTTCATTGCAATATTTAAGAAAACATCGTTTAACACATTTCCAAAATGAAAAACCAAACATTGATGAACTTCAACCACAAACAGCTGAATATTGTAAAAAATATCGAAAGAAAACACAAGAAGTTAAAGTAAGACTATATAAATGTTTATTATGTAACAGAGGTTTTGATATACCATCAGCATTGGAAAAACATATGAATCTTCATGACAAAAACCGTCAATTTCCATGTGAATTGTGTAAAACTTCATATTTGAAATTAAGTCATCTTAAAACTCATATTAACCGTGTACATTCAAAAAAAGAAAAGTTTAGTTGTTCGTATTGTGATAAAATATTTTACGATTCATCAGAAAGAAACTCTCATATACTATGTTCTCATATAGAGAAAAAAGCCAAATGCGTACATTGCAATAAAATGATTTCGAAGAAAAATTTGAAAGCTCACGAAAATACCCATGTTCGGCCAGAAAAATATGTCTGTCTGGTTTGCGGAAAGAGATTCACAACGTATATACCATTGAAAAATCATTGTAAAAAACATTCACCTGAAGAAATAAAATATATTGAAGAAAAAATCATGATTCAAGCTTCGGTACAAACACAAGCAAATCAGGATAATAAGGATTCAAATTAA
Protein Sequence: MSTLELDVHKYCRTCAEFFEDSILIPAFEEIEITTKTNDEFQLAEEIKLLSIQIEKDDGLPQGVCIDCVKHLTRIYEFRQICFKSQKTLEEYFKNIKEPVISNEQLDDVKEDIKFQLLAEEIEYLESDVEMNDREENLDSSDDVERGFAELFDALDGTMEFDDDDVLKNNNGNNGDPIVTDSAYASNTNSSNVKSVESENKVQCNETKLATDDDNNKQDDSRANESLLDSEINKSKKTVDENETEKRWFQTKKKRRYKTKIGEPTDSESKLTLRKCLHCNYYKFSSRFKSDILSCRNRKIKAPSDTEFYCFYCYEKFDMEKVFEDHMTSTHTIEEPYNCKMCEKKFKNYNLLRKHIESLHDGDVSKKCRFCEKIFPSSYHLRRHKEVIHCKKSYECKVCLKKFQINSHFRHHIKTHDEKRQYKCRYCDRRFNQRPHRTLHEEIHTNTDNPYKCEKCGKTFVHSYYYRTHLKTHDGSTLNICEVCGKGFPLQYLLNGHIKGVHAQYQCEICGKKLTSLQYLRKHRLTHFQNEKPNIDELQPQTAEYCKKYRKKTQEVKVRLYKCLLCNRGFDIPSALEKHMNLHDKNRQFPCELCKTSYLKLSHLKTHINRVHSKKEKFSCSYCDKIFYDSSERNSHILCSHIEKKAKCVHCNKMISKKNLKAHENTHVRPEKYVCLVCGKRFTTYIPLKNHCKKHSPEEIKYIEEKIMIQASVQTQANQDNKDSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00235281;
90% Identity: -
80% Identity: -