Bmaj016128.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- -
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000508.1:24135-26047[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.091 25 5.2 1.5 13 29 289 305 282 318 0.82 2 8 0.0076 2.1 8.7 4.0 13 38 320 342 311 347 0.87 3 8 0.23 61 3.9 0.3 12 36 350 371 344 378 0.69 4 8 0.022 6 7.2 0.2 2 39 369 403 368 410 0.82 5 8 1.6 4.2e+02 1.3 0.9 14 29 409 424 398 431 0.73 6 8 0.012 3.1 8.1 0.9 8 33 432 457 425 461 0.74 7 8 7.6e-06 0.0021 18.3 3.4 9 41 460 488 456 489 0.86 8 8 0.051 14 6.0 1.1 18 34 496 510 494 519 0.79
Sequence Information
- Coding Sequence
- ATGGTTACACCTTGGAGTGAATGGTGTCGATTATGTTCGAAGGATAATGTTTGTGGAGTTGACGTTTTCAGCAATAATGAAAATGAAAATAATTGGAAATTACAGAAAACAATTGGAAAATACTTTACTGTTTCGATGCATGAAAACGATGGAACACCATCAAGGATATGTAGAAATTGTTTTAAATTCATTGAGAATCTCGAGATATTTGCTGATCGTGTTTTAAAGGTTGAAACAATGTTTTCGGAATTACTACAAGGAAAGATACCGATAGATGAACAAGATATTGAAAGTATACGAAAGCAATATGGCATACAACATTTTGAAAAGTGTGATCAATCAACTGACACAAACGACTTGATTGCTGACGAATGTATTACTATGAAAGAAAAAAAAAGTGAAGCAAATCCTGTGGTTAAGTCGGAACCAACTGATGACAATGTGTATAAAAACTATGATGCTCTTGAAGAAAATGATGAAAGTATTGAAGCAGCACGAGATCCAATTTGTGTTATAATAAAAACTGAAAATGACGATGAAGAGGAGGAAGCCATGGAACAAAAAAAACCGACAACAAGGAAACGTAAATTACGATTGAAAGAAGTTGAATACGAAGAAGAATTGCCTGGAACTAAGGATGAGATTAAATATTATGAAGAAAGTGATAATGATTATGATAATGATAGCGGAGATGTTGATGATGAAGATTATGAGGAAACTAAAAAGAAAAAATCAAAGAGAAAGAAGAGACAAACTAAATCTGTAGGGGGAGGAGGATCTGACGGTTCAGGGACTGCAGGTACAAGTGCTGGTGAAAAATCGCAAACAAGACGGAAACGTGAAAAGAAAACTGATGAATATAAAGAGAAGACACAAATTAAATGTGAACTTTGCGATAAAATATTTGCACATAAAAGATCATGTGAATATCATATGCAAAATATTCATGCATTACCACAAGAATTAAACTATGAATGTTCACACTGTGGAAAAAAATTTTCAACAGAGAAGTGTCTAAAATCACATGAAATAAAACATTTACCCCCTGAGAAAAAGATGATATATCCATGTCCATATTGCGATAAAAAATTTACAAAACAAGTTAACGTTAAACCACATATTCGTGCTGTACACATTGGTGAAAAATCATTTATTTGTGAAGAATGTGGAAAAACATTTGTCACAAAGGGTGCCCTTAAGGAGCATATGTATACACATATTGAAGAACGTCCTTTTCAATGTTCAAAATGTCCCAAAAAGTTCAAGAATTCAGCGAGATTAAAGATTCATGAAGATATACACAAGGATACCAAGTATATTTGTCCACATTGTGGTCTACAATTGAAAACCAGAAAAACATTAGGTACACATATGGTTATACATTCGGATAAAAAGAAATTCAAATGTAATCTGTGTGGTAATGAATACAAAAGATCAAAAACACTTAAAAATCACATGGTGTCACACACTGGTTTGAGACCATATACTTGTCAATTCTGTGATAAAACGTTTAAATATGGGTCAAGTTGTAGGTATCATAAAAAGAAAGTTCATCCAGTTGAACTGGCTGCATTAGAAATGGCTGGTAAAGAGATTACACCACAAGTTGTTATATAA
- Protein Sequence
- MVTPWSEWCRLCSKDNVCGVDVFSNNENENNWKLQKTIGKYFTVSMHENDGTPSRICRNCFKFIENLEIFADRVLKVETMFSELLQGKIPIDEQDIESIRKQYGIQHFEKCDQSTDTNDLIADECITMKEKKSEANPVVKSEPTDDNVYKNYDALEENDESIEAARDPICVIIKTENDDEEEEAMEQKKPTTRKRKLRLKEVEYEEELPGTKDEIKYYEESDNDYDNDSGDVDDEDYEETKKKKSKRKKRQTKSVGGGGSDGSGTAGTSAGEKSQTRRKREKKTDEYKEKTQIKCELCDKIFAHKRSCEYHMQNIHALPQELNYECSHCGKKFSTEKCLKSHEIKHLPPEKKMIYPCPYCDKKFTKQVNVKPHIRAVHIGEKSFICEECGKTFVTKGALKEHMYTHIEERPFQCSKCPKKFKNSARLKIHEDIHKDTKYICPHCGLQLKTRKTLGTHMVIHSDKKKFKCNLCGNEYKRSKTLKNHMVSHTGLRPYTCQFCDKTFKYGSSCRYHKKKVHPVELAALEMAGKEITPQVVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00235305; iTF_00234273; iTF_00235268; iTF_00235208; iTF_00235296;
- 90% Identity
- iTF_00235305;
- 80% Identity
- iTF_00235305;