Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_932526615.1
Location
CAKOBF010000014.1:252452-256451[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-14 4.4e-11 42.9 0.2 3 44 647 688 646 690 0.96

Sequence Information

Coding Sequence
ATGGTTACACTAGGACCAAAGAAGGATGGTAGTCCAAATGTAGAATTTTATCAATCACCCGAATGTTTACAAGGCTTTGAAACAATTCGGCTATGGCTGCAGAAAAATTACAAAAAGTCGATATCATGTAGTACAGAACCATTAACGAAGGAATCGCTTTGCCAATTGCTCATTCAGTTTATGCAATATCAAGAAAGTAAGCTGGGAAAGAACGCGTTGGAGCCTCCAACCACTAAAATACCGGCAAGATGCTTTCTTGATTTTAAGCCAGGAGGTGCATTATGTCATATATTTGGTACAATGTATAGATTTAGAGCAGAGCAAAGAGGACGAAAATTTGATTTTAGTATTAGTAAAAATCCATCTAGAAAAGATCCTAATATTCAGATGATTTTGGAAATTGAACAAGCACTTATTGAAGCAGATTGCTATAGGTTACCTTACGTTTACATACGTCCTGAAGTTGATAAAAGTGTTGCATCTAGAATACGTGAAATTTTAACAGCACGTAGAGTTGAAATTGTTACGGACGAGGAAGAAGCATCTCATATAATCTATCCATCGGTTGATCCTCATCCAGATGAATATGCTAGGCCATCATTTAAACGTGGTCCAAATGTAATGTTGCACTGGTACTATTTTCCTGAATCTTACGATTCTTGGATACCAAATACATTCGAATTGCCGGAAAACGTATCAGATTCTCCTCCTTCTCCATCTGGATCTGAACAAGACCGATGGCGAGTAACTACAAACTGGGTTCTTGATTTAGAACAATATAACGAATGGATGTGTGAAGAAGATTATGAAATTGATGAACAGGGTAAGAAAAAAATGCATAAACTACGATTGTCTGTCGAAGATCTTATGTCAAATATCGGTGATGAAAAGAAAAAAGCAGCAGCAAATAAGCAAAAAAGAAAAAGATCTCCATCACCTCCTCTAAAAGGTGGTAAAAGAAAAAGATCGCCTGCCGTGTACTCAGCAAAAAAATCCCGAAGTGGTGATGGTGAAGATGATGAGGATTTGACTAGAGATATGGAAGATCCACAACCAGAGCCAAATATCACAGAAGTTAGTAAACCGACAGCTGGTCAATCCACAGCAAGTCCTGCTCCAACAATTAAACAACGCGATAATGAATTGATGCCAATTAAAGGAGGCACAGTAACAGATTTAGATGAAGAAATGCAGGCAGCTGGCGAAGATTCTCAAACTGGAAAAACTAGTGACAACAGCAATACACAAGAATTTCCTCATAAGGAAGATATGGAAGACAATGTAACTGAACAAACTCATCATATAATTGTTCCTTCATATTCTGCTTGGTTTGATTACAATTCAATTCATATGATTGAGAAACGTGCAATGCCAGAATTTTTCAATGCCAAAAATAAATCAAAAACGCCTGAAATTTATATGGCTTACAGGAACTTTATGATCGACACTTATAGATTGAACCCAACAGAATATTTAACAAGTACAGCATGTAGAAGGAATCTAGCAGGTGATGTGTGTGCTATAATGCGTGTTCATGCATTTCTTGAACAATGGGGTCTAATTAACTATCAAATTGATGCTGAACTGCGTCCAACTCCAATGGGTCCGCCACCAACTTCACATTTCCATATTTTGAGCGACACTCCATCTGGCTTGCAACCTTTGAATCCACAAAAAACTCCACAACCTTCAGCTGCTAAAGTTCTTCTTGACTTAGACAAAAAACCAAAGGAAAAGGAAGGTGAAATTACCATACTAACAACAACTACTACCACAACCACCACTACAACTACAAATACTACACCAGGAGCACCGTCAATTGCACCAGTTAAGGTTGAAAGTGGTCTTGAAACAGGTGGTCAGTTCGGTCTGAAGCTAGACCAATACGCTAAGAAACCAGCAGCAATGAAAAATAAAACTGCAGCAAATATGGTTAGAGAATGGTCTGATCAAGAGACTCTTCTTCTTCTTGAAGGTTTGGAAATGTATAAAGATGATTGGAATAAAGTATGCGAACATGTTGGTACCCGAACACAAGACGAATGCATTTTACATTTCCTTCGATTACCAATTGAAGATCCCTATTTGGAAGATGATGGTGGTTTCCTTGGTCCTCTTGCCTATCAACCAATTCCATTTAGTAAATCAGGAAATCCAATTATGTCAACAGTTGCATTTTTGGCATCTGTGGTAGATCCGCGAGTAGCTGCGGCTGCTGCAAAAGCTGCTATGGAAGAGTTTGCTGCAATTAAGGATGAAGTTCCATCATCAATTATGGACGCTCATATTAAAAATGTAGAAAAATCAGGATTTGGTGGAAAATTTGATCCTTATGCTGGATTAGCAAATAGTGGAATTGCAGGAACTGGCCCAGACAAAGAAGATGAAGATCCGAATAAACCACCTGGACTACAACCACCCGTGGTATCGTCACAGGATGAAGAAATGAAGGATTTAACTAAAAAAGAAGCAGAAAAAGGTTCAAAAACACCAGATTCGAAACAAAAAGATAATAAAAAATCACCTACAAACAATGAAAACAAAACATCATCAGATATAAAATCTGAAAAATCAACAATAGGTGACGATAAAGACGCTGCTATTAAAACTGAAGAATCGTCAACAGAATCATCACAGTCAACATCAGCTAGTACTGAAGCAACAAACGGTTCAGCAAAAGAGAATGGTGATTCAAGTCGAAAACTTTTCAATGAAGCCAATTTACAGACTGCTGCAGCAGCGGCTTTAGCTTCAGCAGCAGTCAAAGCAAAACATTTAGCTGCATTAGAGGAACGTAAAATTAAATCGCTAGTAGCTCTTTTGGTTGAAACTCAAATGAAAAAACTAGAAATCAAATTGAGGCATTTTGAAGAATTAGAGACAACAATGGAACGTGAAAGAGAAGGTTTAGAATACCAACGACAGCAGTTAATTACCGAACGTCAACAATTTCATTTGGAGCAGTTAAAGGCAGCTGAATTTAGAGCTAGACAGCAGGCACATCATCGATTACAGCAAGAACAACAAGGACAATGGCAAGGTGGACCACCAAATTTACCACCAACTAGTCAGATTCCTCCTCCAGGTAGTGCACCTCCTCAGGGTCCACCAGCAGCACCTCCAAATACTCAACCTTCACCGCCGGCTGTAGCAGTTCCACCACCACCCCCAACAGCTGAAAATCCACCACCTGTAAACCCAAGTGAGCCAATTCAACCTTCGACTGTTGCTGGTCAAGTACCAGCATCAGCACCAGCACCATCATCAGGAGCACAACAACTGAATACCCAATCACCGGTTACAACTCCTGCAGCTCCACAAACATAA
Protein Sequence
MVTLGPKKDGSPNVEFYQSPECLQGFETIRLWLQKNYKKSISCSTEPLTKESLCQLLIQFMQYQESKLGKNALEPPTTKIPARCFLDFKPGGALCHIFGTMYRFRAEQRGRKFDFSISKNPSRKDPNIQMILEIEQALIEADCYRLPYVYIRPEVDKSVASRIREILTARRVEIVTDEEEASHIIYPSVDPHPDEYARPSFKRGPNVMLHWYYFPESYDSWIPNTFELPENVSDSPPSPSGSEQDRWRVTTNWVLDLEQYNEWMCEEDYEIDEQGKKKMHKLRLSVEDLMSNIGDEKKKAAANKQKRKRSPSPPLKGGKRKRSPAVYSAKKSRSGDGEDDEDLTRDMEDPQPEPNITEVSKPTAGQSTASPAPTIKQRDNELMPIKGGTVTDLDEEMQAAGEDSQTGKTSDNSNTQEFPHKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHMIEKRAMPEFFNAKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQPLNPQKTPQPSAAKVLLDLDKKPKEKEGEITILTTTTTTTTTTTTNTTPGAPSIAPVKVESGLETGGQFGLKLDQYAKKPAAMKNKTAANMVREWSDQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLAYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDAHIKNVEKSGFGGKFDPYAGLANSGIAGTGPDKEDEDPNKPPGLQPPVVSSQDEEMKDLTKKEAEKGSKTPDSKQKDNKKSPTNNENKTSSDIKSEKSTIGDDKDAAIKTEESSTESSQSTSASTEATNGSAKENGDSSRKLFNEANLQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQGQWQGGPPNLPPTSQIPPPGSAPPQGPPAAPPNTQPSPPAVAVPPPPPTAENPPPVNPSEPIQPSTVAGQVPASAPAPSSGAQQLNTQSPVTTPAAPQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00118627; iTF_01518902;
90% Identity
-
80% Identity
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