Bmaj017215.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- -
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000727.1:66723-68781[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-09 9.7e-07 28.6 0.0 2 37 16 51 15 54 0.92 2 2 3.4 1.8e+03 -1.1 0.1 13 21 151 159 149 159 0.91
Sequence Information
- Coding Sequence
- ATGGTTAGAACTTATAAGCGAAAGACAAATAGATGTTCTATCGACGAGAATGCTTTGAAACAAGCAGTTAAAGATGTTATATCGAAAAAGGAATCGGTAAGGTCTGCTTCGAATCTATATAATATACCACGAACGACATTAAGGAATCGCTTGACTAAGTATTTGAAAAATGCTACATCGGTTGATGATTCTGGACAAAGCTCAAATGATGATGATGACCATACAAAGAAATTTTCGTCAAAGTATACCACAAAACAAGTTTTTACAAATCAGCAGGAAAAAGAAATATCTGAATATTTCAAAATTTGTTCAAACCTGCAGTATGGGTTTTCATATTTGATGGCTCGTACATTTGTTTTTGATTACGCGACTATAAACAAAATACCAATTCCCGAATCGTGGAAGAAAAATAAAATCGCAGGAATTGATTGGATGTACGGTTTTATGAAGAGGAACGGGCAACTAAGCTTAAGAAAACCGGAAAATACCAGCTTGGCACGATCAACCGCATTCAACAAACCGGCTGTTATAAAATTTTTTGAAAACCTTAAACATTTGATGGAGCAGCATTCTTTTCCTCCAAATAAAATTTATAACCTTGACGAAACTGGTATTAGTACAGTGCTTCCATCACCCAAGGTAATTTCTACAAAAGGTAAGCGAGCAGTATCGCAGGTGGTTTCTGCGGAACGAGGACCTTTAGTCACTATGGTTGGGATTGTGAATGCAGCTGGCAACTCAATACCTCCAGTTTATATTTTTTCACGATTGCGGTACAAGGATCATTTTGTAAACGGTGGTCCAAGTAGCTGTCTTGGAATAGGTAATAAAAGTGGTTGGATGACTTCAGATATATTCGTAAACGTCATAAAGCACATACAAAAAAATTCAAACTGTTCAAAAGCGAATCCAATTTTGTTGATATTGGATAACCATGTCTCGCACTGTGGATTAGAATCAATTTTGTATTGCAGAGATAATGGAATATCACTTTTAACCTTTCCTCCTCATACTTCGCACAAGCTGCAGCCATTGGATGTTACAGTTTATGGACCATTCAAGAAATATCTATCAACTTCTTATATGAATTTCTTGGTAAATAATCCAGGGCGCGTAATAACTATTTACGATATACCAGCGTTATCTCACATACCGTTTTATAAAGCATTTATACCAGAAAATATTATTAAAGGATTTACATGTACAGGTATATATCCATTTAACCATCTAATATTCCCAGACAATGACTTCGTGGAAAGTTCTGAAGTAGAACATATGTGTGGATCAGAAGATCCAGTTATAGAACCCAGCATTGTTGAGATGAATCCACAACTAAGTAATAACGATGACATACCAACTACATCTGTAAGAACTCCAGAACAAATTTGGCCACTTCCTCGGCTTAGAAAAATTGTAAAACGGCGCAAAATTAAGGCAGGTAAATCAAAAATTCTCACATGTACTCCCGAAAAAGATGAAAAGATTGCTGCTGTTGCAAAAAAAATAAAGCCAAAATGTTTTTCGGTAGCTACAGAAAAAGGCACTAAGACTTTAAAAACGAAAAAGAAAAGGTGTCCATCAATTACATCTTCTGATAATTCAAATGCTGCTTTTAGTTTAGCAGAAACTGAAAATTCTATTGGGGAGCTTTCAGAAGTTGATAGTTTACTGCAAGAAGAACTTTCTATCATTGATTTTAAAATATGTTGCACTGACATATTATCAGCAAATGATTATGTTCTTGTAAAATACGGTGTAACGTTTTATGTAGGACGCATTATTTCTGTAGATGAAAAAGATTCATACCAAGTCGATTTTATGAGGAAAAAAACATTATCTAGCATTTTTTACTATCCTGTAGTTCAGGATGTGGCACAAGTTCAAAGAGTTGATATTGAGTTGAAACTTCCTAAGCCCATTCAGCCAGCTCAAAATTCTCGGGCAGCTGAAAGCTATACTTTTGATTTAGATTTAGGTATGTATAATGTTAAATAA
- Protein Sequence
- MVRTYKRKTNRCSIDENALKQAVKDVISKKESVRSASNLYNIPRTTLRNRLTKYLKNATSVDDSGQSSNDDDDHTKKFSSKYTTKQVFTNQQEKEISEYFKICSNLQYGFSYLMARTFVFDYATINKIPIPESWKKNKIAGIDWMYGFMKRNGQLSLRKPENTSLARSTAFNKPAVIKFFENLKHLMEQHSFPPNKIYNLDETGISTVLPSPKVISTKGKRAVSQVVSAERGPLVTMVGIVNAAGNSIPPVYIFSRLRYKDHFVNGGPSSCLGIGNKSGWMTSDIFVNVIKHIQKNSNCSKANPILLILDNHVSHCGLESILYCRDNGISLLTFPPHTSHKLQPLDVTVYGPFKKYLSTSYMNFLVNNPGRVITIYDIPALSHIPFYKAFIPENIIKGFTCTGIYPFNHLIFPDNDFVESSEVEHMCGSEDPVIEPSIVEMNPQLSNNDDIPTTSVRTPEQIWPLPRLRKIVKRRKIKAGKSKILTCTPEKDEKIAAVAKKIKPKCFSVATEKGTKTLKTKKKRCPSITSSDNSNAAFSLAETENSIGELSEVDSLLQEELSIIDFKICCTDILSANDYVLVKYGVTFYVGRIISVDEKDSYQVDFMRKKTLSSIFYYPVVQDVAQVQRVDIELKLPKPIQPAQNSRAAESYTFDLDLGMYNVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234714;
- 90% Identity
- iTF_00234714;
- 80% Identity
- iTF_00234714;