Bmaj017727.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- -
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000887.1:45036-45815[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-10 9.5e-08 31.8 0.0 5 38 1 34 1 40 0.91 2 2 9 4.8e+03 -2.4 0.0 14 22 126 133 121 133 0.74
Sequence Information
- Coding Sequence
- ATGCAGAAAGCGATTGAGGCCGTACGCAGGGAAGAAATGGGTGTTCTTCTGGCATCAAAAAAATTTGGAGTTCCTGCTACAACTTTGCGAAGAATGGCTAGGAGCGATAAAAGTACACAAGAACTTCTTTGTATTTCTTTAGGGCGAAGACCAGTCCTCAACAAAGATATCGAAGATGATCTCGTAAAATATCTCCTAGAAATGGAAAGAAGATACTTTGGCTACACTCGACGTGATGTTTGCTCTAtagccttccagttagctaaaagaaacaacataccaaattcgttttctctgcttaaacaaaaagcaggcaaagattggttttatagttttctaaaaaggcataaggacaaaatttctgtacgaaaaccagttgggacttctattcaacgagcacatgggttttcgaaggataatattgagcgattttttaatcttttagaagaaatatatgacgctcaccagtattcggcttcccgaattttcaacgtagacgaaacaggactttcaattgtacaaagcaaacaatcccatgtaattggaagaaagggtaagaaacaaattggtgcaattacatctgcggaaagaggtagtttagtaaccgttgttacatgtatgagcgcaggaggtaatttcataccaccgttttttatttttccgagaaaaaaccggaatgacgccttcatgagagacgctcctcctggatctaaagctgcttttcatgcgtcaggatggattcagcttccgatttttactgattggtttcagcacttctga
- Protein Sequence
- MQKAIEAVRREEMGVLLASKKFGVPATTLRRMARSDKSTQELLCISLGRRPVLNKDIEDDLVKYLLEMERRYFGYTRRDVCSIAFQLAKRNNIPNSFSLLKQKAGKDWFYSFLKRHKDKISVRKPVGTSIQRAHGFSKDNIERFFNLLEEIYDAHQYSASRIFNVDETGLSIVQSKQSHVIGRKGKKQIGAITSAERGSLVTVVTCMSAGGNFIPPFFIFPRKNRNDAFMRDAPPGSKAAFHASGWIQLPIFTDWFQHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -