Bmaj005009.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- clz9
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000073.1:2696721-2698820[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-12 2.2e-09 37.1 0.0 2 40 7 45 6 49 0.91
Sequence Information
- Coding Sequence
- ATGAATGCAACTATACGAGATGAAAAAATCTCCAATGCCTTGTTAGACATCAGAGAAAATAAACTAAGTATTCGTCAAGCAGCAGCAAAATATGAGATACCTCGGTCCACCCTTCACGACCGCATTACAGGCAAAGTAAACGAAGGACCTACTAAAAAAGGTCCAGATCCATATTTAAAATTAGAAGAAGAAAATGACTTACTAGATACAGTTCAAAAAATAATAAAAGATACTAATCGCGAAACTCCATTTAAAAACGATCGTCCTGGTAGAGCTTGGTTAAAAGGATTCTACAAAAGACATCCAGAGTTAACTAGTAGAGAAGCAGAAAACATCACCAAAGGTAGAGCACTAGTATCTGAATCGTTCATTAGAAAGTGGTTTCACGATCTTGAACAATACCTTAAAAGCATTAATCATGAAgatgtcttaaatagccctagtcgcataatgaatggtgatgaaaccagtttcaacctatgccctaaaactgggaaagtgattgctccaaaagggttcaagaatgtatatcaaatacagtcagccaatgaaaaagaaactttaacagtattactgttattttcagctgatggaacacttttaccacctatggttgtatttccttatttgaaaccaccaagggacatagttaacagcatggagaaagattggtttttaggtaaaacagaaagcgggtggatgcgaacagaaacatttttcgaatatgttgctaattgtgtagaaccttggctgaaaaaaaacaacgtacaaaaaccagtcatccttttcgttgatggacataaatcgcatctatctttagaacttagcaaattttgcagcgacaatggtattattttgtatgccttgcctcccaaatcaacccacattctacaaccagctgacgtcggtgtttttaaatcaataaaaagtgattggaagcaaacagttagagactggcaatttgttaatgttggacaaGTGCTGACGAAGAAAACGTTTTGTCCTTTATTAAGAGACACAATTGCACGAAATAAAAATCTTGCAACAAATATCAAAAATGGATTTAGAAAATGTGGACTTTTTCCATTTAATCCAAATGCAATTGATTACACGAAATGTGTAAAGGACAACACAAAGACGATTCAAGAAAATCGAAATAAAGAAAATTGTAGTGTTTTTGGAAATACTACAATAAACACATCTGCTGTTGTTTCTGAAGCGATTAGGGTTATATCCAGCAAATTAATTGATCGTGGAATACAAGCTGATGAAATACTTCAAGTTATTGAGGAAGAAGAAGAAAGTATTTCGCTACTAAGCATAGGTCAATTGTCCACACCTACATTAAATTTATCTTTTAGTAGTCTACAATCAGGAGTTATTTATGATCTACAAACTGATGGATCTTTGAAGATTGCAAATAACTCTACAAATAATGCCAAAGAGTTGCAATCTAATCAATCTCCAAAAGATTCACTAAACATACAATTACCTACTTCGTCTCCTGCTCAACCTTTAGATCCTCCAAATTCCAGAGCAACGTTATTTGATTCAACATATTCACCAATTCCTGGACCTTCAGGTCTATCAAATTTCAAAGGACATAATGAATCTCCTTTGTCTTCCAGATCTTCAACACCATCAATTTCAATGAAGTCGTGGTCTCCATTGAGTAGGCATTTGTATTACCCAAAAACAATATCGTTTGCTGGTAAAAGAAAGTATCGTGAAAATTGTGATAAATCTCCAAGTGCAATTTCTTCTCAATCTTGGAGAGATATATATTTAGAGAAAGACAAAAAAAAGAAGATGAAGGAAGAGGCTGTACAACAGAGAAAGCAAATGCGCTTAAAAAAGCTTGAGAAAATTAAGCAAAATAAAATAATTAAGAAAACACTAAAGACTGCAAAGGTAAAAGAGCATTGTTCAACTTGCAACGAGGACCTCGTAAGTGATGTTGAAGACGATAATCTAAAAAATATTGGGTGTGATAGCTGTCCAAGATGGTATCATTTAAAATGCACTTCAATGTACTCTTTAACCTATAAGGAAGCTGCACATAATGATTTTGTATGCACCTTTTGTGCTAATTCAAAATAA
- Protein Sequence
- MNATIRDEKISNALLDIRENKLSIRQAAAKYEIPRSTLHDRITGKVNEGPTKKGPDPYLKLEEENDLLDTVQKIIKDTNRETPFKNDRPGRAWLKGFYKRHPELTSREAENITKGRALVSESFIRKWFHDLEQYLKSINHEDVLNSPSRIMNGDETSFNLCPKTGKVIAPKGFKNVYQIQSANEKETLTVLLLFSADGTLLPPMVVFPYLKPPRDIVNSMEKDWFLGKTESGWMRTETFFEYVANCVEPWLKKNNVQKPVILFVDGHKSHLSLELSKFCSDNGIILYALPPKSTHILQPADVGVFKSIKSDWKQTVRDWQFVNVGQVLTKKTFCPLLRDTIARNKNLATNIKNGFRKCGLFPFNPNAIDYTKCVKDNTKTIQENRNKENCSVFGNTTINTSAVVSEAIRVISSKLIDRGIQADEILQVIEEEEESISLLSIGQLSTPTLNLSFSSLQSGVIYDLQTDGSLKIANNSTNNAKELQSNQSPKDSLNIQLPTSSPAQPLDPPNSRATLFDSTYSPIPGPSGLSNFKGHNESPLSSRSSTPSISMKSWSPLSRHLYYPKTISFAGKRKYRENCDKSPSAISSQSWRDIYLEKDKKKKMKEEAVQQRKQMRLKKLEKIKQNKIIKKTLKTAKVKEHCSTCNEDLVSDVEDDNLKNIGCDSCPRWYHLKCTSMYSLTYKEAAHNDFVCTFCANSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234706;
- 90% Identity
- iTF_00234706;
- 80% Identity
- -