Bmaj014081.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- bab1
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000336.1:20680-22936[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-12 2.9e-09 36.7 0.0 4 44 428 468 425 469 0.91 2 2 0.56 2.9e+02 1.4 0.3 4 20 565 580 564 583 0.92
Sequence Information
- Coding Sequence
- ATGGCTACAAACGAAGGACAAGCATTCTGTTTAAGATGGAATAATCATAAATCAAATTTAGTTGAAGTATTAGATGTATTAATTCAAAAAGAATGTTATGTTGATTGTACAATTGTTGTTGATGGTCAAGTACAATTTAAAGCTCATCGTGTTGTATTAGCTGCTAATTCACCATATTTTCAATCGATATTACAAGATGTACCAATGGATCATTGTAGTATATTATTTCCTGGTGTACAACCATTTGAAATGCGTGCCTTATTAGATTATATGTATACTGGTGAAGTGAATGTAACACAAAGTCAAATTCCAAAAATTATGAAAATTGCTGAACAATTAGAAGTAAAAGGTTTATTTGATATGACTGATTTAAAAGAGAAATttaataaatttgatgatacatcaacatcattagcatcattacatcatcatcatcatcattctcattctcattatccaccaacaccgcatacaccaacaccaacaccaatctatgctccaccatcaacaacaataagtggatctggttcatcaaataaagatggtggcggtaatattgtttgtggcagtggaagcagtggtaatagtagtcatggtgatcatcgtgatcgtgatcgtgaacgtgaacgtgatcgtgatcatcatcatcaccaacatcatcatcatcatcaacatcaacaacaaccgccacaacaacagcaatcaccatcaatgatctcaacatcaacaagtgtaacccaagcacatagtagctcatcaccgccaTATACTTCATACAAATCACCATTCTCTGGTTTACATTCAAAAAGTCCTGGACCATCAACATCCGATACAAGACATTCACAATGGCCAATAACTGCTCATTTGCCTACATCACTATTGGGATCAGTTTATGAATCTGGATCTGATATGAATCCTTTAAAACGAAAGAAATTACATTCAATTTCAAGTATGCTAATGACAAAAGATACACCGATATTAAGGAATGTTTTACAACCACATCCAGCTGACTCATCTCAGGTAGTACCGCCAGTATGTCAACCAATTAAACCAGAACGTACTGAAAAACAAAGTTCAGGAAATTGTAATGGACGAGGAGATTATTCTGGTGATAAGAAACTGAAATACGAAGAACCGCATTCACCATACACAGATAAATCGTATGAAGACGATGGTTTAGATTGCCCACCAAATTATTCAAGTGACTCACAATTACCTGGATATGTTTCACAGCAACAACAAAAACCAGAATGGAAAAGATACAAACAGTATACAAGAAGTGATATATTATCAGCCATTGAATGCGTTCGAAATGGTATGAGTGCATTACAAGCTTCACGAAAATTCGGTGTGCCTTCAAGAACACTTTATGATAAAGTCAAAAAACTAGGAATTACATCTGGCCGTCCAATGAATCGTACTTTAAAACGAAGTCCAAGTAATGGTGGAAATTCAGCAAATTTTCCATTTGGTATAAGTGGAACAAATCATCATTATGGTGGTCAGAGTGAACCTCTTCTATCACAAATGCATGAAAATCAATCAAATGATCGTGACAAGGAACGTGATCATCCACATTTACCACCCACTATTCCTCATCCAGCTGCTGCACTTTTAGATCCATCATTCTTACAACAAGCGCTTGAAGGACGTGGTGGTGATATCGCTGGTCGAGAAGCTTTACATGCCATGGCATTGGTAGCAGCTGCACATTCTGCTGTCAATGGAATGTCAACAAGTCCTGGTGCAAATGGTTCAGCACGATCACCAAGTCCTGGTATATCAATAAAATATTCTTTACGTTCACACAGTCCACCGCCACACATGAAACGTGAATTAGAACAAATGGACGATGATGAAGATCGTGTAGAAGATTTATCAATCGGACGAAAAGAATCAATGCAATCACCACCGCCACGATCACCATCAATCCCGCCAAGTAATAATCATCATTCATATGTGCCTTCAAGACGGTCAGAGTCACCATCATCCCCACCACCGTCACAACAACAGCAGCAACAACAACAATCACAACAAACAGGAGTCATTGTGCCACCGATTACAAAACTTTCATCGAATGGAGGTGAAGATTATGGAAATATTGAACCGAAACGCGAATGTATTACAGATGACTCAAGGGACTAG
- Protein Sequence
- MATNEGQAFCLRWNNHKSNLVEVLDVLIQKECYVDCTIVVDGQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQPFEMRALLDYMYTGEVNVTQSQIPKIMKIAEQLEVKGLFDMTDLKEKFNKFDDTSTSLASLHHHHHHSHSHYPPTPHTPTPTPIYAPPSTTISGSGSSNKDGGGNIVCGSGSSGNSSHGDHRDRDRERERDRDHHHHQHHHHHQHQQQPPQQQQSPSMISTSTSVTQAHSSSSPPYTSYKSPFSGLHSKSPGPSTSDTRHSQWPITAHLPTSLLGSVYESGSDMNPLKRKKLHSISSMLMTKDTPILRNVLQPHPADSSQVVPPVCQPIKPERTEKQSSGNCNGRGDYSGDKKLKYEEPHSPYTDKSYEDDGLDCPPNYSSDSQLPGYVSQQQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITSGRPMNRTLKRSPSNGGNSANFPFGISGTNHHYGGQSEPLLSQMHENQSNDRDKERDHPHLPPTIPHPAAALLDPSFLQQALEGRGGDIAGREALHAMALVAAAHSAVNGMSTSPGANGSARSPSPGISIKYSLRSHSPPPHMKRELEQMDDDEDRVEDLSIGRKESMQSPPPRSPSIPPSNNHHSYVPSRRSESPSSPPPSQQQQQQQQSQQTGVIVPPITKLSSNGGEDYGNIEPKRECITDDSRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00235057;
- 90% Identity
- iTF_00235057;
- 80% Identity
- iTF_00235057;