Bmaj009030.1
Basic Information
- Insect
- Bombylius major
- Gene Symbol
- bab1
- Assembly
- GCA_932526615.1
- Location
- CAKOBF010000158.1:120703-122198[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-17 1.8e-14 53.3 0.0 1 43 53 96 53 98 0.95 2 2 0.55 2.9e+02 1.5 0.2 2 15 190 203 189 207 0.86
Sequence Information
- Coding Sequence
- ATGGAAAATTCTCAAGCATGGCTAGGAGCATCTACTTCATCAATAGCAGATAGTTATCAATATCAATTACAATCAATGTGGCAAAAATGTTGGAGCACAAATCAAAATTTAATGCATCATCTTAGGTTTAGAGAAAGAGGTCCTTTAAAATCATGGCGACCAGAAACAATGGCTGAGGCAATTTTCAGTGTTTTAAAAGAAGGATTGTCTTTATCACAAGCAGCACGAAAATATGACATTCCATATCCAACATTCGTATTATATGCAAATCGAGTTCACAATATGTTAGGTCCATCAATTGACGGTGGAACAGATTTAAGGCCAAAAGGGAGAGGAAGACCTCAACGAATATTACTTGGAATATGGCCGGACGAACATATAAAAGGTGTTATAAAAACGGTAGTGTTCCGAGATGCGAAAGAATTAAAAGATGAAAGTATGCATCTTGGTTACGGAAGACATTCGCCCGTCTTTCCATTTCAAGAAGCACCATTAAATTATCCTGGTACTCCttgtacaaatggattaacacctcaaccaacaggttcaagtgcggattcaatgtcaccagaagctacagcagcagcagtagcagcagttgcacatggaattcgacaacaaATGCAAATGGCCGCTGTTGGGCATCATTCGGACAATACGTCTAACATTTTTAATTTACCTTCACATTTACACACCAATAATAGTGGTGTAACATTACCAAAGCAAAGTTCACCATCACCTAGCAGTCAAATAACATCTAGTTCACAAAGACTTACCTCACCATCACTTTCTGTTCTTCCCAGTCCATCTGCTGTAGGATTAAGTGGAATTTCATGTATGCATGGAGTTTCAAATCTTACTTCCAACCCTAGTCATCAAGCAATTGCATCGTCCATTAGTTCCAGTTCGTACTCTTCCAATGTTGTCAGTCAACAACAGTCATCATCTTCTTCGCTTTCATCATCTTCAATAAGTTATACACAGGCACCATCGGTGAATAGTTTATCATCAACATCAAATATATTATCAAATATGACAAGGAATGAGTCACCAACAGAATCAGCTCATGATCTTCGTCTTGGTAATATTGAAGAAACTCCATTAAATTCACCCCTTGAAATGTCTTCTTTGGAACCAGCCGTAAATTTGGCTATTGGTGTAAGTGGAATGGCTTATAAGCCTTCACGTGGATACTCATCACCTCGGCCTGAAAATTTATTCCAAGAAGATATTGCCGATTTAGTCGGAAATACCCAACGAAATTGTCCATCCAATTTAAGTAATTTTAAAGATCCCACATCAAGTATTAAAATTGAACCAGTCGCGGAATGTAGGAGCGAATAG
- Protein Sequence
- MENSQAWLGASTSSIADSYQYQLQSMWQKCWSTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKELKDESMHLGYGRHSPVFPFQEAPLNYPGTPCTNGLTPQPTGSSADSMSPEATAAAVAAVAHGIRQQMQMAAVGHHSDNTSNIFNLPSHLHTNNSGVTLPKQSSPSPSSQITSSSQRLTSPSLSVLPSPSAVGLSGISCMHGVSNLTSNPSHQAIASSISSSSYSSNVVSQQQSSSSSLSSSSISYTQAPSVNSLSSTSNILSNMTRNESPTESAHDLRLGNIEETPLNSPLEMSSLEPAVNLAIGVSGMAYKPSRGYSSPRPENLFQEDIADLVGNTQRNCPSNLSNFKDPTSSIKIEPVAECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01518817;
- 90% Identity
- -
- 80% Identity
- -