Basic Information

Gene Symbol
ARID5B
Assembly
GCA_932526615.1
Location
CAKOBF010000295.1:105043-112845[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.1e-14 1.8e-10 41.3 0.3 2 89 519 599 518 599 0.90

Sequence Information

Coding Sequence
ATGTACATTCAATTAAAACTTAATAACATAAAAATTAAAATCATAAAATCTTCAaaaCCAATTGGAGGGCCATGCGGGTTTCATGGTCCTTATACTTTTTACAAAGGTATTCAAATTTCTCCTTTTAATAGTATAAGCAATTCGAATAGTCAAAAACATAATTTGTCTTCAAATGCTAATAATACAAAAACTGCAGTAGTCAAAAATAAACCAAATACAAGAAAATGTGTGAGTGATAAACGTACAGACAATGGAATGAATAACACAACGAGATTTTTAAAGCCCATCGTTCTTTCATTGGGTGATTGCATACCAGTCCGTCCTTGGACAGATTCACCAATAGCTTGTTTGGCAGAAGTGCGAATGATTTGGCGAGATAAAAATGAACCATCATTATTAACTGGATTACGGTTGTATTTTTTACCAGAAAATACACCTATGGGCAGGAATTGTCATGGAGAGGATGAAGTTATTGCCATATCTGATAAGGTAGTAATACGTGCTGAAGATTTACCAACTTGGTATGATGAAAATTTAGAGTGGAACTGGGGTTTAGCAAAATCTGTAAATCAAATAAAAGGAACAACACCGATAAGAGAAACAACAATAACATCATCAGATGATAATGATGTAAATCAAAAAGTACAAACAACATTGAATAAGTCAAGAAGTGTGAATGGAAATAACAATAACAAAACAGATAGTAGCAATAACAAAAGTAGTACTGATGACGTTACTGTAAATAAAATTACTTCTCTACGAAATTCTCAATTAGATTTTACTGAAATAGATAAAGAAAAACAAATATCTGAAACACAGATAAGAGTTGCTGTATTGAGCTACCCTAGATACTGTCGCTATAGAGCAACATTAAAAAGACTAGAAGGTCTCGGTGGAGAATGGTTCAAAAATTCCATAGTTGGAGCATTGTGTGGCTTTTCATCAACAATATCTGATTTCAGAGTAATGTTTTGTCGGGATACATTTGATTATCCTGAACTAGAAACACATGAACTTTTATGTAATCATCTAGTACCTAAATTGAAAGGTCGACCACGTGGCAAGAAAAAGAAAACTCGATCTGAATCTCCATTTACAGGAGGACGGAGAACATTTGATTCAGATAGTGAATCAAATGACTCAGATATATCCATATTTTCACTCGGTGAAAAGAACACATTTACACCAATACAATCACGTCCGCAATTACGCTTCAATCACAGACCTTTAAGAAATAAAGTTGGTAAATCTGAAATAGACTATAAACCTTACAGAAAATTATACTTAAAGAAAGAAGGCAAAGAGAAAGACATTGAAGTAATAGGAACTCATTTAGAACAGAAAACAGAGAAAATAGCTTTTGATTGCAGTAATAAAAAATCTAGAAAAAAAATATTTCTACGCCCAAATTCTGATCGGAAACGTCTGGATGATGAAACTGCATCGACAGTATCATCAATATCATCTTCATCAACATCTGCGTCATCATCATTTTCAAGGTTGTCAATCAAAAAACGAACAACAAAATGCATACCAAATAGTACGTCTTCACAGGAAAAATTCTTTTTACGAAAATTACATGAATTTCACATCAAACACAGTAATGTTATTCCAAAAGTTGTATGGCTTAGTCTGAAGGGTGTTCATTTGTACTCAATATTTAGACAAGTAAAAACACTCGGAGGTTATGATGCTGTAACTGAAAAAAAATTATGGAAACAATTATTTGGAGAAAAAAATGGTCCACGTCATACGATTACAAGAAAAAAATATGAAAGAATCTTATTACCTTTGGAAAAATCGGAATTAGTAACAAAAAAGAAAAATGAAAATAAAGAAGTTGAAAAAGAAAATGAAGTGGAGAATGAAATAGAATTGATAAATGCGGTAGATAAAGGAAGTGTGAAGAGCAAAAGTAAAAAAGAAACAAAAGATGAAGAAAATGAAAATAAAGAAAATGAAAAAGGAATTGAACAAAAAAAAGCAGAAGATGATTTAGAAAAAGAAAATGTTAAAGAACTGTATAGGAAAAAGTTGGAAAGTCATGATTCGGATGATTCATCACTTAAAATACCATCTCTTAAAGTAACAATTAAACAAGAAAAATCTCCAGATAATTCAGCGCAAGAACTAACCAAAGAAGATATGACAAGAATACAAGAAAAAATAAAATCAAAATCAGTATCAAATGATTCTAACATAAGTACAATCAGTGCAACATCTACTAGCGGCAAAATTTCAGTAACATCAAGTCCTACAGCATCGGTTTCAGTACCAGTTACTGTAATTGTTGAAACTACTGACCCAACTACAAATTCTGATGATAGTGAACAGCAAAAAACACCTGTAATTTCTTGTACATCATCTACAAATAGTTCTTGTTCTTCTTCAGACCATCACCAATTATCACCATCTCATCAACAGATTCAGATTCATCAACAGCCGCATACAACTATAACAGTACATCAAACTACAATTCATCCTCAAACTCATTCCAATTTAATGACATCATCACTATCACCATCTTCTCATCATCAAACTATAACAAATAAAATTCAAATTACAAATCAAATACAAATTCAGCAAATAACTGTTCAACCGACTGCTACAGGAGTTACTATCGGTAATATGAACAAAACTTCATCAACTGAATTTTGTTGCAATTTCAAGCAGGatagagattgtcaagaagtgaaaattgagaaacgcgatagtaacagaggtgttcgaagtaataataataataataataataataataataataataataataataataatagcaatgttgttaaaaatgatttcataagatcaacatttgaAAAAGAAAATATTCCATTTATAGCAGCTGGTACAACAATAACTCCGGTATTATCCTCACCGCAAGTGCAATTGCCTAAAAATTCACCGGAAATCATTGATCTTTTGGATAGTGATGGAGAAAATAGCAACAGTAGTTCTGCCATAAAACAGCTGCCATCATCATCGTTGCGACCAAAAACAAAACTAAATCGTGATAATACATCATCATCAACATTACCAGTGCCTCCAGTTAAGAAACGCAAACTAGATATTCTCCGAGAAGGTGGTCTCGAAGTTACTGCTATTAGTAATAAACATGGGGTTATTTCTAATGCACCACCGTTGTCGTGGTCAATTTCTCCAATTCAAAATTCTTCCCATAAAACATTTACAACTGAACGTTGTTTCGAGGCATCAAAATTCAATCTTCCTTCAACAACAAGTCTTTGCATCCCGAATAATGAACCACATATAAATATACCGGAAATTAATTCCCACAGTATGTTCATAAAAACAGAGAAAATTTTCGGCAATCCAAAAGATGTTTTACCATCAAATCCGATATCAAGTGGCTCTGGAGAAGTACTAGATTTAACTGTAAAATCTCCAATAAAATTTCCATCATTGGAAATTCACCCAATTCCAACAGCAAGACATATAAGCTCCCCACCAGTATCTCTTACTGCAAATAAATTTTCATCAAATATCACAGCAATTAATCTAACAAATTCAAAACTGTCATCATTAACATTACAATCACCAAAATTATCATCTGAAACTGGATTGCAAATAACTCTTGTGCCGTCAAATAGATCAGCAGCACAAACAAACATAACGAAATCACATGCACCAGCGGTTTCAACACAATCACACTATCATTATCAGCAGCCTCAAATGACATTAACACAGAATGTACACAATTCACAAAATCATAATATGAAGCGAAAAGCAGCCGTTGATATTCTTCCGATTCCAAACATGCTACCGATACAGTCAGCATCATCTCCACTTATTCAAAAACATCAGTCTACCGCTTCCATTAGCCCAGTTATAAATAATGGTTCTCACCAGTATCAAAAACATTGTAAAAGTATTGATAAAAAATTGAACAATACACCACAACAATCAAGATTTCCCACACAAACTCTACCTGTTACATCTGCTTCTCCTATCAAACAGTCATCACCAAAACCACAAATACAACAACTCTCCCCAACACCACAGCAATCAATTTCTCTACCATCCTCCACTTTTCCTCCAGATGTAATTGATTCTAAAACATCTGCATTATTTCCTTTTTCACCTTTCATTTCACCGTTAGCCGCTGCAGCAGCTGCAGCAACATCGTCAACTTCAAATCCTTTTCTACCTATTATGAATCCCTTATTTCTTTCAAATTTATACCCTCAAACAGCAGCTGCTTCACAACTTTTCTTACCAAATCAACAAAGGTTAGCGGAATTGTTACAATTATACAAAAATTTATCACCAGCAGAAATTGTTAATAATGGAATTGGTAGTTCTACTTCTTCTAATATAAATGGCGGTGGAGCTTTTACAGATTCAATTAATAATAATAAATTAAAATAA
Protein Sequence
MYIQLKLNNIKIKIIKSSKPIGGPCGFHGPYTFYKGIQISPFNSISNSNSQKHNLSSNANNTKTAVVKNKPNTRKCVSDKRTDNGMNNTTRFLKPIVLSLGDCIPVRPWTDSPIACLAEVRMIWRDKNEPSLLTGLRLYFLPENTPMGRNCHGEDEVIAISDKVVIRAEDLPTWYDENLEWNWGLAKSVNQIKGTTPIRETTITSSDDNDVNQKVQTTLNKSRSVNGNNNNKTDSSNNKSSTDDVTVNKITSLRNSQLDFTEIDKEKQISETQIRVAVLSYPRYCRYRATLKRLEGLGGEWFKNSIVGALCGFSSTISDFRVMFCRDTFDYPELETHELLCNHLVPKLKGRPRGKKKKTRSESPFTGGRRTFDSDSESNDSDISIFSLGEKNTFTPIQSRPQLRFNHRPLRNKVGKSEIDYKPYRKLYLKKEGKEKDIEVIGTHLEQKTEKIAFDCSNKKSRKKIFLRPNSDRKRLDDETASTVSSISSSSTSASSSFSRLSIKKRTTKCIPNSTSSQEKFFLRKLHEFHIKHSNVIPKVVWLSLKGVHLYSIFRQVKTLGGYDAVTEKKLWKQLFGEKNGPRHTITRKKYERILLPLEKSELVTKKKNENKEVEKENEVENEIELINAVDKGSVKSKSKKETKDEENENKENEKGIEQKKAEDDLEKENVKELYRKKLESHDSDDSSLKIPSLKVTIKQEKSPDNSAQELTKEDMTRIQEKIKSKSVSNDSNISTISATSTSGKISVTSSPTASVSVPVTVIVETTDPTTNSDDSEQQKTPVISCTSSTNSSCSSSDHHQLSPSHQQIQIHQQPHTTITVHQTTIHPQTHSNLMTSSLSPSSHHQTITNKIQITNQIQIQQITVQPTATGVTIGNMNKTSSTEFCCNFKQDRDCQEVKIEKRDSNRGVRSNNNNNNNNNNNNNNNNNSNVVKNDFIRSTFEKENIPFIAAGTTITPVLSSPQVQLPKNSPEIIDLLDSDGENSNSSSAIKQLPSSSLRPKTKLNRDNTSSSTLPVPPVKKRKLDILREGGLEVTAISNKHGVISNAPPLSWSISPIQNSSHKTFTTERCFEASKFNLPSTTSLCIPNNEPHINIPEINSHSMFIKTEKIFGNPKDVLPSNPISSGSGEVLDLTVKSPIKFPSLEIHPIPTARHISSPPVSLTANKFSSNITAINLTNSKLSSLTLQSPKLSSETGLQITLVPSNRSAAQTNITKSHAPAVSTQSHYHYQQPQMTLTQNVHNSQNHNMKRKAAVDILPIPNMLPIQSASSPLIQKHQSTASISPVINNGSHQYQKHCKSIDKKLNNTPQQSRFPTQTLPVTSASPIKQSSPKPQIQQLSPTPQQSISLPSSTFPPDVIDSKTSALFPFSPFISPLAAAAAAATSSTSNPFLPIMNPLFLSNLYPQTAAASQLFLPNQQRLAELLQLYKNLSPAEIVNNGIGSSTSSNINGGGAFTDSINNNKLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00233689;
90% Identity
iTF_00233689;
80% Identity
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