Bdis003940.1
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- stc
- Assembly
- GCA_939192785.1
- Location
- CALNDV010000233.1:79446-82781[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.9 1.7e+04 -4.1 1.6 15 19 350 354 349 354 0.81 2 12 0.012 1.1e+02 2.9 20.1 4 19 397 412 385 412 0.89 3 12 1.6 1.4e+04 -3.8 1.7 5 10 437 442 437 442 0.93 4 12 9.7e-06 0.084 12.9 13.4 3 18 450 465 448 466 0.91 5 12 0.78 6.8e+03 -2.8 1.4 8 13 471 476 470 477 0.79 6 12 8e-09 7e-05 22.7 10.2 1 19 506 524 506 524 0.97 7 12 8.6e-06 0.075 13.0 15.0 4 18 572 586 565 587 0.88 8 12 0.0066 57 3.8 9.3 1 11 627 637 627 638 0.96 9 12 4.6e-10 4e-06 26.7 15.5 1 18 654 671 654 672 0.97 10 12 2 1.7e+04 -11.0 15.2 8 18 717 728 705 729 0.68 11 12 4.3e-07 0.0038 17.2 14.5 1 17 765 781 765 790 0.87 12 12 3.2e-07 0.0028 17.6 15.3 1 19 797 816 797 816 0.96
Sequence Information
- Coding Sequence
- ATGTCTAATTATTCCCAATCAGAAAGTAATAATGGTGGTTTTAATAGTACCATTAACAACACAAATGATAGCACTACCACCGCTCGCAATAATAATACCAACAATTATATTGATTTCAATCAATTTATTCTTCAACATAATTTTGTTAGTCCATATGCTGATCCATTAACTTTGCTTCAGCAGCAGCAGCAACAACAACAGTCAGCAATAGGCAATCTTTATGGATATTATCCAGGACAGGTGCCTTATATGCCTTCCAATATTAATTTTTATGGGTATCCATTTGAAAATCAATCTGTATTCTCACAACAACAACAGGATCAACAATCACAAAATGATATTGCTTTAATATCAAATTTAGTTCCAACAGCTGCAGAATTTGTACCACGATTTAATGATTTGAGAATATCATCACAACATCAGGATTTATCAACAACAAATGCTGATGATGTGGCACAATTGCAAACACCAGATGAAACAAGTGAAAGAAATGTAACAAGCAAAAGCAGTGGCGGTACGATAAACAAAAATATTTCATCGACAAGTGGTCGTCACAGAAATTTCGATGGAAATAGACCAAATGCGAAATTCTTCCAAAATAATGAATTCAATAGCAGCAATGGTAATAACAACAACAGTAATAGAAATGTTCAAAAAGCAATTGAAAATAATCGTCATGCAAAACGTCGAGAAAATTGGAGATATCATCGTGAATTAGAAAGCCCACGAAATGAGAAACGTGATACAAGTGATTCTGATGATTCGCAATATCAAAAATCTTTGAAAAAAGATAATAAACCATTGTACAGTAGCAACAGGTCATTGCCAAAAGTACAAATAGCACAAGAAATTACCAACAACGAGAAATTATCACAACGTGAAAAATTAATTCGAGAAATTGATGCTCGGAAGCTGGAATGTCTTGTTTGTGTTGAACAAATAAAAGTATATCAATCGGTTTGGTCATGCGGAAATTGTTATCATATTTTACATTTGAGCTGTATTATTAAATGGGCATCAAGTTCGAAATCTGAGGAGGGTTGGCGTTGTCCAGCCTGCCAAAATATTACAAAAGTCATACCTCGTGAATATTATTGTTTCTGTGGTAAAACAAAGAATCCTCAGTATAATCGTGATGACTTAGCACATAGTTGTGGTGAACAGTGCGGACGAAAAGATGGTTGTCCACATCCTTGTACTTTACAATGTCATCCGGGTCCTTGTCCTGCATGTCAAGCAAATGTAAGTCGTGAATGTGGTTGTGGTAAAACGAAGAAGACTATGCAGTGTTGTATGAAAGAGGATATTAAGTGTGAAAATAAATGTGAAAAATTGCTAAATTGTGAGTTGCATACTTGTGAACAAGATTGTCATCAGGGCAAATGTCCAAATTGCGAAAATAAGGTCGATCAGAAATGTCACTGTGGAAAATTGGAACGACAAGTTGCATGTACACGTGAATCAAATGAAAAGAAGTCGTTTTCATGTGGAAAGCCATGTAATAAATTGTTAGTTTGTGGAAATCATAAATGCAAGGATTTCTGCCATTCAGGCGAGTGCAAACTCTGTAAATTAACTCCAGAAGTTATAACATCTTGTCCTTGTGGAAAAATGCCTCTGTTAAAGGAGCAACGTAAATCATGTCTCGACCCAATTCCAGTTTGTAATGGAACTTGTGGGAAGGTGTTAAAGTGTGGCCCACCAGCATTTCCTCATCATTGTGCCAGTAAATGTCACACCGGAAACTGCCCACCATGCAACAAACAAACTGCCATCAAATGCCGATGTGGTCACATGGATCAAATGATAAAGTGTCGACAGTTATCAACAAGGGCCGATGATGCGCGATGCAAAAAACGTTGCACAAAGAAAAGGAGCTGCGGAAAACATAAATGTAATCAAGAATGCTGTATTGATATTGATCACATTTGTCCGTTGCAATGTAATTACACTCTCTCTTGCGGTAAGCATAAATGTGATCAACCATGTCATCGTGGTAACTGCCCACCTTGTTATCGGAGTTCATTTGATGAACTATATTGTGAATGTGGAGCAAATGTTATCTATCCACCCGTACCATGCGGTACAAAGCGTCCTGTATGTGATAAACCTTGTTCCAGACAGCATAATTGTGATCATCCAGTCAAACATACTTGTCATTCAGCTTCGACTTGTCCTCCATGCATGATTTTCACAACAAAGTGGTGTCATGGGCATCATGAACAAAGAAAAACTATTCCTTGTAGTCAAGAAAGCTTTAGTTGTGGTTTACCTTGTAACAAAGATTTAAGTTGCGGTCGTCACAAATGTATTAAGCCGTGTCATGATGGTTTGTGCCAAACACAAGGTGAATCTTGTACTCAAAGCTGTACAGTTACGAGATTAATTTGTGGTCATAAATGTAATGCTCCATGTCATGATGGCGAATGTCCAGAAACACCATGCAAAGAGATGATTGAAGTAACTTGTGAGTGTGGAAATAGAAAGCAAATGCGAACATGTCAAGATTGTGCAAGTGAATATCGACGTATTGCAACTGCTCAGTTGGCATCATCAATGCAAGAGATGCAACGTGGTAATTTTATTGAATTAAGTGATATTATGGGTCCAATGAAAATGACAAATAAATCACTGGAGTGTAATGAAGAATGCCGTGTACTTGAACGTAATCGTCGTCTTGCAATTGGTCTTCAAATACGTAATCCCGATTTAACACCGTCAACAAAAATTTTAACACGGTATTCAGATTTTATACGTGGTTGGGCTAAAAAAGATCCACAACTAGTAAAAATGATTCATGATGCACTCACAAATTTAGTTAAATTAGCAAAGGAGAGCAAACAAAAATCACGTAGTCATTCATTTCCAATAATGAATCGTGAAAAACGACAATTGGTACATGAAATGTGCGGAATGTTTGGTGTTGATTCAGTTGCATATGATGCTGAACCAAATCGTAATGTTGTTGCAACAGCACATAAAGAAAGGTCTTGGCTTCCAGCTATGAGTATTATGGAAGTTTTACAAAGAGAAAGTGGACAACGTCGTGTTCCTGTCCCTAATAATAATGCATGGGGATTAAAAAAGTAG
- Protein Sequence
- MSNYSQSESNNGGFNSTINNTNDSTTTARNNNTNNYIDFNQFILQHNFVSPYADPLTLLQQQQQQQQSAIGNLYGYYPGQVPYMPSNINFYGYPFENQSVFSQQQQDQQSQNDIALISNLVPTAAEFVPRFNDLRISSQHQDLSTTNADDVAQLQTPDETSERNVTSKSSGGTINKNISSTSGRHRNFDGNRPNAKFFQNNEFNSSNGNNNNSNRNVQKAIENNRHAKRRENWRYHRELESPRNEKRDTSDSDDSQYQKSLKKDNKPLYSSNRSLPKVQIAQEITNNEKLSQREKLIREIDARKLECLVCVEQIKVYQSVWSCGNCYHILHLSCIIKWASSSKSEEGWRCPACQNITKVIPREYYCFCGKTKNPQYNRDDLAHSCGEQCGRKDGCPHPCTLQCHPGPCPACQANVSRECGCGKTKKTMQCCMKEDIKCENKCEKLLNCELHTCEQDCHQGKCPNCENKVDQKCHCGKLERQVACTRESNEKKSFSCGKPCNKLLVCGNHKCKDFCHSGECKLCKLTPEVITSCPCGKMPLLKEQRKSCLDPIPVCNGTCGKVLKCGPPAFPHHCASKCHTGNCPPCNKQTAIKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHICPLQCNYTLSCGKHKCDQPCHRGNCPPCYRSSFDELYCECGANVIYPPVPCGTKRPVCDKPCSRQHNCDHPVKHTCHSASTCPPCMIFTTKWCHGHHEQRKTIPCSQESFSCGLPCNKDLSCGRHKCIKPCHDGLCQTQGESCTQSCTVTRLICGHKCNAPCHDGECPETPCKEMIEVTCECGNRKQMRTCQDCASEYRRIATAQLASSMQEMQRGNFIELSDIMGPMKMTNKSLECNEECRVLERNRRLAIGLQIRNPDLTPSTKILTRYSDFIRGWAKKDPQLVKMIHDALTNLVKLAKESKQKSRSHSFPIMNREKRQLVHEMCGMFGVDSVAYDAEPNRNVVATAHKERSWLPAMSIMEVLQRESGQRRVPVPNNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -