Bdis003971.1
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- -
- Assembly
- GCA_939192785.1
- Location
- CALNDV010000239.1:55620-63939[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.2 11 6.6 0.3 1 23 18 41 18 41 0.94 2 17 0.0018 0.1 13.1 1.1 3 23 190 211 189 211 0.96 3 17 0.3 17 6.1 3.9 2 23 233 254 232 254 0.91 4 17 7.5 4.3e+02 1.6 7.2 1 23 412 434 412 434 0.93 5 17 0.0019 0.11 13.0 1.7 1 19 440 458 440 461 0.96 6 17 0.15 8.7 7.0 1.9 2 23 596 618 595 618 0.95 7 17 0.29 17 6.1 7.0 1 23 638 660 638 660 0.97 8 17 7.5 4.3e+02 1.6 7.2 1 23 818 840 818 840 0.93 9 17 0.0028 0.16 12.4 0.8 1 19 846 864 846 867 0.95 10 17 0.036 2.1 8.9 1.8 2 23 988 1010 987 1010 0.95 11 17 0.45 26 5.5 6.2 1 23 1030 1052 1030 1052 0.96 12 17 0.073 4.2 8.0 2.3 1 23 1058 1080 1058 1080 0.83 13 17 0.0002 0.011 16.1 1.1 1 23 1086 1108 1086 1108 0.99 14 17 7.9e-06 0.00046 20.5 3.2 1 23 1114 1136 1114 1136 0.97 15 17 0.0029 0.17 12.4 4.1 1 20 1142 1161 1142 1164 0.95 16 17 0.09 5.2 7.7 0.8 1 23 1173 1195 1173 1195 0.98 17 17 0.00015 0.0086 16.5 1.1 1 23 1201 1223 1201 1223 0.98
Sequence Information
- Coding Sequence
- ATGAAAAAAAAATGTGGAGAAATTTTTATGAATGAATATGAAAGTTTCAACTTTTTATGTACTTTTTGTGCAAAAATTGTAGAAGATGTTGAAACGTTTACAAAACACATTAGAAATGATCACAACGAACAATGTAAACAAAAAAACTTCACATTAAAACGTAAAAAATCTTCATCATCATCAAAAGCTAAGCAGAAAACTTCAATAATAACACCTAATATTGAACCAAGTATTGAATTTGTTTCATTTGATTATGTTGAAGCGAAAGAAGAACCAAATTCACCACTATTAACACCAGCAATATCAGAAAATAAAGATAATATACAACTCGAATTGTCTGTTGTAGATTACAAAGATGAAGATGAAGAAGAAGAAAAATATTGTAAAAAAATGTTATCACAAAAATTTGATGGTACGGATGAAACACCGAAGTCTACTGATGATTTAGAACTCCAAAACATAAAATTAAATGTGAAAGAAAAAGATGAATGTGAATCTTTTAATTCTCGAATTAATTCAAAAACAAAAGTAACATCTAATAAATCTAAAAGTAAAAAAGATGCATTCTGTGACATTTGTAAAAAAAAATTTTATTCTATAGTAAGTTTACGAAGTCATTTAAAATATGATCATGAAACAAAAAATTCTTTAATACATGAATTTTCTAATGAAGATGATCCATTAgaagatccattaaaatgtagatattgtaaacgtaaatttcgtagtcgaaaagatcgatacgaacatgaatattcacatactggtcaaaaaccatatgaatgtgatgtttgtgAAATTGAATCTTTTATGAAACATATTAAATCTTATCACTTGGAATTATGTAAAGAAAAAGATTCATTGGAGAAAACTTATAAGACACCATCAAAAATCACACAGAGTGTGTCAACAACAACAACAACAACACAAAGTAGAAAACAAAGTCTTGAATTTGACTTTTTCAGTGAAATAAATTCGAAAAAACAATTGAACTCTTCATCAATAAGAAGAGGAAGATTTGAAGATGTTGATTCTCAATTCGACTCTAATATTACAAATTACAATGATGAAGGAGAAGAAGAAGAGAAGGAGGAGGAAGAGGATGAGGAAGAAAAATATTCTGAACAATTATCGAAAGTACAAGATAACTCTAAAGAATGCAATCAATCTTTGAAACAAGCTTCTGTTCATAGACTTGTCACTGACACTGAAAAAATAACACAAGTTGATTCTTTCAAATGTAGATTTTGTGACCATAAATTTGTAAATCGTAAAGAACGATATCAACATGAACATTTGCACATTGGTGAGAAGCCTTATAAATGTGAAAATTGTGGTACGCATTTTTCAACAGAATATTCTTATACAATTCACAATGACAAAAAGTTATGTAAGGGAAAAAATATCTTGAGAAAACACAAAAAATTATCATCGTCAGCAAAGACCACGGATACGGTACCATCAGAAAAAGTAGATAAAAAGCAGAATAATGAATTTAGTGTAATTGATGCAAACAAAACAGAAAAATCGCCATCTGAAACAAAACAAGCAGTAATTGAGAACGAAGGTGTTAAATTTGAAACGTCTATTGTAAATAACAGTGATGACGAAGTTGGAAAATCCTTTGATGATGAACGAGAAAAATCCTCTGACGATGAAAGTGAAACATCTTCTGAAGAACTTTCAGAAAAAGAAGAAAATAATAAAAACAATAGTTCTAGAATGAAAACAAGATCCTCAGATTGTATATCAATATCCAAAAAACGAAAAGACAAAGTCACGTTATCTTGTGAAATTTGCAATAATATATTTCATAAGAAAACAGTTTTGCGAAGCCATTTGAAATATGATCACACATTAAGTACCTCGATCAATCAAGAATCAATTGAACAACCACCATTAAATGATCCATTCGAATGTCGATATTGTAAACGTAAATTTCGTAGTCGTAAAGATCGTTTTGAACATGAATGTTCAcatactggtgataaaccatatgaatgtcatatatgtgAAATTGAATCTTTTATGAAACATATTAAATCTTATCACTTGGAATTATGTAAAGAAAAAGATTCATTGGAGAAAACTTATAAGGCACCATCAAAAATCACACAGAGCGTGTCAACAACAACAACAACAACAACAACACAAAGTAGAAAACAAAGTCTTGAATTTGACTTTTTTAGTGAAATAAATTCGAAAAATAAAGTGAACTCTTCATCAATAAGAAGAGGAAGATTTGAAGATGTTGATTCTCAATTCGACTCTAATATTACAAATTACAATGATGAAGAAGAAGAAGAAGAGAAGGAAGAGGATGAGGACGAAAAATATTCTGAACAATTATCGAAAGTACAAGATAACCCTAAAGAATGCAATCAATCTTCGGAACAAGCTTCTGTTCATAGTCTTGTCTCTGGCACTGAAAAAATAACACAAGTTGATTTTTTCAAATGTAGATTTTGTGACCATAAATTTGTAAATCGTAAAGAACGATATCAACATGAACATTTGCACATTGGTGAGAAGCTTTATGAATGTGAAAATTGTGGTATGCATTTTTCAACAGAATATTCTTATACAATTCACAATGACAAAAAGTTATGTAAGGGAAAAAATATCTTGAGAAAACACAAAAAATTATCATCGTCAGCAAAGACCACGGATACGGTACCATCAGAAAAAGTAGATAAAAAGCAGAATAATGAATTTATTGCAATTGATGCAAACAAAACAGAAAAATCGTTATCTGAAATGTCTATTGTGAATTACAGTGATGACGAAGGTGGAAAATCTTTTGATGATGAACGAGAAAAATCCTCTGACGATGAAAGTGAAAAATCTTCTGAAGAACTTTCAAAAAAAGAAGAAGATAATAAAAAAAATAGTTCTAGAATGAAAACAATATCCTCAGATTGTATATCAATATCCAAAAAACGAAAAGACAAAGTCACGTTATCTTGTGAAATTTGCAATAATATATTTCATAAGAAATCAGTTTTGCGAAGCCATTTGAAATATGATCACACATTAAGTACCTCGATCAATCAAGAATCAATTGAACAACCACCATTAAATGATCCATTcgaatgtcgatattgtaaacgtaaatttcgtagtcgtatggatcgttttgaacatgaatgttcacatactggtgataaaccatatgaatgtcatatatgtggtaaacggtattcaattggttatatttatagaaaacatttaaattttcataaaaaagaaaaaccatttaaatgtcaaatatgcgaagatgattttacaatacgttcaaatttaacaatgcatatgcgtcgtcataaatatgaaaaacgttttgaatgtcgtcattgtggtaaaatgtttgcacataaaaataatttaaatgttcatgaaagagcacatactggtgaaaaaccatatcaatgtacacaatgtggattatgttttatatcatcaagtagattaagagtacataccatttgtcatcatattaatgaaaaagaaaaaccatataaatgtcaattttgtgccagaccattttcagcaaatcgtgaaaaacgtgaacatgaaagaattcatactggtgagaaaccatttatttgtgaaatatgcagtgcatcatttcgaactggaagatcattaaaaaaccatagaaaaactcatTCAAATAAATCTGAGTAA
- Protein Sequence
- MKKKCGEIFMNEYESFNFLCTFCAKIVEDVETFTKHIRNDHNEQCKQKNFTLKRKKSSSSSKAKQKTSIITPNIEPSIEFVSFDYVEAKEEPNSPLLTPAISENKDNIQLELSVVDYKDEDEEEEKYCKKMLSQKFDGTDETPKSTDDLELQNIKLNVKEKDECESFNSRINSKTKVTSNKSKSKKDAFCDICKKKFYSIVSLRSHLKYDHETKNSLIHEFSNEDDPLEDPLKCRYCKRKFRSRKDRYEHEYSHTGQKPYECDVCEIESFMKHIKSYHLELCKEKDSLEKTYKTPSKITQSVSTTTTTTQSRKQSLEFDFFSEINSKKQLNSSSIRRGRFEDVDSQFDSNITNYNDEGEEEEKEEEEDEEEKYSEQLSKVQDNSKECNQSLKQASVHRLVTDTEKITQVDSFKCRFCDHKFVNRKERYQHEHLHIGEKPYKCENCGTHFSTEYSYTIHNDKKLCKGKNILRKHKKLSSSAKTTDTVPSEKVDKKQNNEFSVIDANKTEKSPSETKQAVIENEGVKFETSIVNNSDDEVGKSFDDEREKSSDDESETSSEELSEKEENNKNNSSRMKTRSSDCISISKKRKDKVTLSCEICNNIFHKKTVLRSHLKYDHTLSTSINQESIEQPPLNDPFECRYCKRKFRSRKDRFEHECSHTGDKPYECHICEIESFMKHIKSYHLELCKEKDSLEKTYKAPSKITQSVSTTTTTTTTQSRKQSLEFDFFSEINSKNKVNSSSIRRGRFEDVDSQFDSNITNYNDEEEEEEKEEDEDEKYSEQLSKVQDNPKECNQSSEQASVHSLVSGTEKITQVDFFKCRFCDHKFVNRKERYQHEHLHIGEKLYECENCGMHFSTEYSYTIHNDKKLCKGKNILRKHKKLSSSAKTTDTVPSEKVDKKQNNEFIAIDANKTEKSLSEMSIVNYSDDEGGKSFDDEREKSSDDESEKSSEELSKKEEDNKKNSSRMKTISSDCISISKKRKDKVTLSCEICNNIFHKKSVLRSHLKYDHTLSTSINQESIEQPPLNDPFECRYCKRKFRSRMDRFEHECSHTGDKPYECHICGKRYSIGYIYRKHLNFHKKEKPFKCQICEDDFTIRSNLTMHMRRHKYEKRFECRHCGKMFAHKNNLNVHERAHTGEKPYQCTQCGLCFISSSRLRVHTICHHINEKEKPYKCQFCARPFSANREKREHERIHTGEKPFICEICSASFRTGRSLKNHRKTHSNKSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -