Basic Information

Insect: Bombylius discolor
Gene Symbol: RREB1
Assembly: GCA_939192785.1
Location: CALNDV010000048.1:160221-166416[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.007 0.4 11.2 0.6 1 21 297 317 297 319 0.96

2 13 0.0004 0.023 15.1 0.2 1 23 329 351 329 351 0.98

3 13 2.8e-05 0.0016 18.7 7.5 1 23 357 379 357 379 0.98

4 13 0.032 1.9 9.1 3.3 2 21 579 598 579 599 0.94

5 13 1.9 1.1e+02 3.5 0.3 1 19 644 662 644 665 0.76

6 13 0.011 0.61 10.6 0.1 1 23 851 873 851 873 0.97

7 13 4.5e-05 0.0026 18.1 1.0 1 23 882 904 882 904 0.99

8 13 0.00099 0.057 13.9 2.0 1 23 910 933 910 933 0.97

9 13 0.00098 0.056 13.9 2.8 1 23 1287 1310 1287 1310 0.96

10 13 0.0001 0.0059 17.0 0.3 2 23 1621 1642 1620 1642 0.97

11 13 0.17 10 6.8 6.3 1 23 1648 1671 1648 1671 0.97

12 13 0.1 5.8 7.5 1.1 3 23 1810 1830 1809 1830 0.91

13 13 0.0028 0.16 12.4 4.7 1 23 1836 1858 1836 1858 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.007	0.4	11.2	0.6	1	21	297	317	297	319	0.96
2	13	0.0004	0.023	15.1	0.2	1	23	329	351	329	351	0.98
3	13	2.8e-05	0.0016	18.7	7.5	1	23	357	379	357	379	0.98
4	13	0.032	1.9	9.1	3.3	2	21	579	598	579	599	0.94
5	13	1.9	1.1e+02	3.5	0.3	1	19	644	662	644	665	0.76
6	13	0.011	0.61	10.6	0.1	1	23	851	873	851	873	0.97
7	13	4.5e-05	0.0026	18.1	1.0	1	23	882	904	882	904	0.99
8	13	0.00099	0.057	13.9	2.0	1	23	910	933	910	933	0.97
9	13	0.00098	0.056	13.9	2.8	1	23	1287	1310	1287	1310	0.96
10	13	0.0001	0.0059	17.0	0.3	2	23	1621	1642	1620	1642	0.97
11	13	0.17	10	6.8	6.3	1	23	1648	1671	1648	1671	0.97
12	13	0.1	5.8	7.5	1.1	3	23	1810	1830	1809	1830	0.91
13	13	0.0028	0.16	12.4	4.7	1	23	1836	1858	1836	1858	0.99

Sequence Information

Coding Sequence: ATGATGAAAACAAGCccaacctttcaagtaaatactgcatcagcaccagcagcaatatcaataacaacaacagcaacaacaaatgaacatactaccagcaataataaaatggaaatacgtcgaaattcatcatcatcaacaacatcggAATCATCGGTTGAACCAATGGATTTAGGACGTACTCCACCAAAAAAGAAAAGTAAAATTACAGCAAAAATTTCAACATCTTCCATAAAAAATGAATCAATAATATCAACAACAACACCAGCTAAATCATCATCAAATAACGATTCAGAAACATATGAATCTGAAGAtaatagtgatggcagcgtaggtagtggtagccgaagtagtgatagcagtagtggaaatataaataataacaaaagcaatcatcatcatcaccatcatcatcgtggtagtaataaAAAACGAAATAATCGATTTCATCGTGATAGACATGTACACATCGAATTAAGTGATAATCCAAATTcattacgtaagaaatttcgtataagcacaccaaatagtcgaaatcatcatcatagcagcagcaataacaataacattaataataataataataataataataataatagtagcatgaataataataataatagtccatcgtataccaaaggtaataatagtgcaacaacaacagtagcaatgacacctgcctcatcaaaggtggtatcattaacaccagaatctgcaacaacagcagaaactgcagatacaattggaacagatcgaacaaacaatgaatctggattcgttgataccagtagccatcatttaaattcatctagtccagaaccatcagcaacagtaacagcaatacaaaacgaacaacaacgtAACGATCGTAGTGATGATGTTAAATATGTTTGTCCAATATGTGAAGTAGTATCAGCAACACCTCATGAATTTACGAATCATATAAGATGTCATAATTATTCATCAGGTGATTCAGAGAATTTCACTTGCCGAATATGTTCAAAGGTTTTATCATCAGCATCATCCTTGGATCGTCATGTGCTTGTTCATACTGGAGAACGACCATTCAATTGCAAATATTGTCATCTAACATTTACCACAAATGGTAATATGCATCGTCATATGAGAACGCATAAACAACATCCACAACATCGTCGATCAGCTagtcttggaggaggtggaggaggtggtggtgccgtaagcaataattgcaataatggtaatgctaataatggtggcagtggttgtagtagtggtgcaaatagtacgaccagcagtcgaggtggtcacgatagtagtggcggtggtggaggtggcggtggagctgatggtgaaagttatgaaagtgatgcttgctcaacagattcaaatgccagtagctcaaataataacaataacaataataacaacagcagcaataacaacaataatggacaccatcatcatcattacaaacgtaaaagtactgacgatgataatggaataataaagagacgaatgaagacgaccattaataacaataacataatcaatgaaaatgataccgacaacacaacagcaacagctataacaaattttcaaaatcagcaacagcaacaaacgataacaacaacaacaataacaccaccatcaaTCCAAAAATATTGTTGTCCGGTATGTAATCGTAATGATTTCATTAGTATGCTATCATTGGGCTCACATATGGATCGCGAACATCCAGGTATTCCAGCTAAATGTCGACAATGTGATGTCGTTTTTAAAACTCATAAATCTTTAAATGCTCATCGTTGTTTAAATAATAAACCGCTTAATATTACGCAAGGTTTTAAAGATATCGATTTTGTTGATTTTTCAAGTGAAAAATTTCCATTAATAGCGAAATCGCTATGTGAACAAACAATTCGAACATCAATTACAAATCAAAAATTCGAATGTCCAAAATGTTATCGTGCATTCCCATGTGCAAGTGCTGTTGATATTCATATAAAAGATTGTGGAGAAATATCTGTATCGTCACCACCACGAGATTATTCATTACAACAACGTAAACGTTTACCAAGTGAAAGTTCTTCTTCTGAAGAGGAAAATAATCGTCGTGATGAATTTTTTGCTCATCTTGATTTGCAAAATAAATCAGCAATGAGTATAACGAGTACAGTATCATCATCGCCACGTACTTCAGAAAAATCTGAAGGAAAATGTAATAATGCTGATTATGAGATATCGACATCATATGATCACCAACAACAACGACCTCAAACGCATCAACAATTCAATCATCATCAACAACAACACCAAGAATTTCAACGTTTTCATCGTGCATTTGAAAAACAAGAATCGTTACATCATCAACAATCCCTTAACGAATCAAAAGATTTAGCTGACATTCAATCAATTTTGAATGTAACATCATCGTCAAGCAGTTTTCTTCGTAATTTTGAAAACTGCGTGAATACACCAAGCAGTGAATACAGCTATAACAAGGATGAGGAAGAAGCACAAGACGCTTTTACATCAGAATTTAGAAAAATGAAATTACGTGGAGAATTCCCTTGTAAACTTTGTACAGCAGTATTTCCAAATTTGAGAGCATTAAAAGGACATAACAGGATTCATTTAACAGCTGCTGGAGCTGGACCCTATCGATGCAATATGTGCCCATATACGATTCATGATAAAGCAGCCCTCATTCGTCATATGCGTACTCATAATGGTGATCGACCTTATGAATGTGCTGTTTGTAATTATGCGTTCACTACAAAAGCTAATTGTGAAAGACATTTGAGAAACCGACATGCAAAAACCACAAGAGAAGAAGTTAAACGTGCCATCATCTATCATCCATCAGAAGATTCGAGTTGTGATGATCCAGTAAAAAAAATTCATTTATTTTCATCACCAGAATTCGATAATGACGACGACCATCCAGCACCAAAAGATCGGTCTACGCCTGTTTCTCATCTCAAAGAAATGCTGCAATCTACTGAGAAGCCAGTTAAGATACAAGTGAAAAGTCTTGAAAAATTAATTGATAAAACCGCTGCTTCATTTGAAAGTCGCGAGAAAGATTTCGAAATAAGCAATCGAATTGAATCGAATGGACCAATTGATCTCAGTGTCAATCAATCATCAACTTCGGATGTTTTAGATTTAAGTAAAAAATCTAAACCTGCTGCTCCTGTTGTAGATCCTGTAGAGATTAAACATGATCCAGAACCACCATCACCAGCAGAGGAACAAATAAAAATGGGAAATATTCAACCACTTGACAAAAATCAACTAATGTTTGCTCAACAACAATTTTTAAACGATACTTTTCCAAAACTGGATCCTGCACATTTCTTTCAACTTTCACAAATTTATCGTAACATGCAACTTTTTCCACAATTTCATCCTTTCCTGCTGCCGAACTCATTAATGCCAAATATAAATGATTTGAATAAATTTGCTCCTGGAATGCTGATGAATCCAATGTTTAACGCTGCAGCTGATCAACAAGTTTCTCCTCAGCTGCCCACTAGTATACCTAGTAGACCACAATCTCAACCATTACAATCACAACTCCTTGGAAAACCTTTAATAGAAGCGTCTTTACAAAAACCACTCACTCAATCTCAACCTCCACCACCACCACCACCACCTACAACACAAATTCTTCAAAAATCCCTAACTCAGCCTCACAATGTTCCATCAACAACTCAAATGACAATATCACATCATCCTCATTTGAGTCGACCAGCTTCACAGCCGCCATTAATAACTCAACATCAAAATTCTGGTCCAGTAAAAATGGTAATTAAAAATGGTGTATTAATGCCAAAGCAGAAGCAAAGACGCTACAGAACAGAAAGACCATTTTCTTGTGAACACTGTTCTGCAAGATTCACATTACGTTCGAACATGGAACGTCACATAAAGCAACAACATCCACAATTTTGGGCTCAAAGACAACGAAGTGGACATCATATACTTCGACGAGGTCATGGTAGCAGCAGTACTCTTTCTCATCAAATCTCTTCGCCACAAATGCCTCCTCAGGCAACAGCAGCACCTAGTATGGCACCAAATCATTTCAATGCAATTTCAGAACAAGTTAAATATGCTCTTCTGGCACAGCAACTGAAGGCTAGAAAGGATACTGATATTCTTCAACAAGCTCTTGCTCAAAACCACGAACCTGCAAACAACACATCTAATACCACTTTTAACTACAATCAAAGCCAAAATAACACAACTCCAAACAATAATACCATCAATATTGAAGATGATGATCCAAAACTTGTGATCGATGAAAGAGAAGAAGAAGATGAAGACGATGATGAAGAGGAAGTCCAATGTGAAGATATAAAACCAGAAGATCTCTCAAAGCAGACAAATTATGCTGAAGAAAATAACTGTACAGCTAAAAAGGTTGCAGAATCTATTCTAGAGCAAGCAATTAAAGCTGGAAATAATTCATCCCAAAAACAAACTAACCAATTGCCCAACAACACAAACAACGAAAATCATGCCAGAGAAAAGGATATTCCAAATTTTAAAGCAGCCAGTAATATGATTACGAAAGCAGAATCTGTTGGAAAATATTTGAAAGAGGTTGCAAGTTCTTCATTCAAAGATGACTCATCTGATTTGGCATCGGTATCAAAACTTGTCGATAACGCAACAAATTCTCTGCACTTCAACAATTACTTTCGAGCCTCTGCTGATTTCGCTAATCAGTTAGAACAAAGTGACGAAGAAGGTTTAGTAGCATCTGGTAGTGCTTCAGAAAGTAATCATTCAGGCACTGAAGAAAGTCAAGGGAATGGACAAGAACCAAAAAAGAAATCTGCATATAGTCTTGCCCCAAACAGAGTATCATGTCCTTATTGCCAACGTATGTTCCCATGGTCCAGTTCTCTTCGTCGCCACATCCTCACTCATACTGGACAAAAGCCATTCAAATGTTCACATTGTCCACTTTTGTTCACTACCAAAAGTAATTGTGATCGTCATTTATTGAGAAAACATGGAAATGTTGAATCTGCAGTTTCACTTTATGTTCCAATTGAAGACATCCCAGATCCAATACCAACACCAAAAAGCTGTTTTGAAGATCAAGAGACATCAAAAGCACCACTTCAAACACCAACAATTCCATTAAATTTGAATATACCAAATTTAAAAAATGAAATTGTTCCTGTTACATCATCTGATTTACCATTCAAATGTCATTTATGCGATAGCTCATTCTCAGAACGAATTCATTGTTTGGATCATATAAAAAATCATCATGCTCAAGAATTTGCTTTATTATTAGCAAAAGGTGCCATAGATGCTGATGCTGATTTTAATCAAATGCATTCAGCTGAAGATGATGATAATAATAAAACAGATAGTGGACGTGGTGGTAAATATCCTGATTATACAAATCGTAAAGTAATATGTGCATTTTGTATGCGACGTTTTTGGTCAACTGAAGATTTACGTCGTCATATGCGTACACATTCTGGAGAACGTCCTTTTCAATGTGAGGTATGTTTAAGAAAATTCACATTGAAACATAGCATGTTACGTCACATGAAAAAACATAGCGGTGGTCATCATAATAATCAAACAAATCAAACCAACAGCGGTTCAGATATTTCAGATGATGAACAACCCACTAGTATGATTTTAGCAAACTCTTTGAGAAATCATAAAATACAAGAGATCCTTAGTAAAGCTGAAGCTTGGAGGAACAATCATATGAACAGTGAACAAAAAGAAAATATTGCCATTCATCGACCATTGATTAAAACTGATGGTAAAGTTGGCAGTGGTAATAATGATCCAAATAACAGTGGAAATGGAGTAACAGTAGCATCAGTAGCTGGTCATGAGGAAAATACCGATTTAATTGGAAATTTATTGGGCATCAGTGATCAAGGTATTTTGAATAAATTACTATCTTCAGCTGATGAAGCAGCAAAATTGCTTGGTGTAGAAAAGTAA
Protein Sequence: MMKTSPTFQVNTASAPAAISITTTATTNEHTTSNNKMEIRRNSSSSTTSESSVEPMDLGRTPPKKKSKITAKISTSSIKNESIISTTTPAKSSSNNDSETYESEDNSDGSVGSGSRSSDSSSGNINNNKSNHHHHHHHRGSNKKRNNRFHRDRHVHIELSDNPNSLRKKFRISTPNSRNHHHSSSNNNNINNNNNNNNNNSSMNNNNNSPSYTKGNNSATTTVAMTPASSKVVSLTPESATTAETADTIGTDRTNNESGFVDTSSHHLNSSSPEPSATVTAIQNEQQRNDRSDDVKYVCPICEVVSATPHEFTNHIRCHNYSSGDSENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHPQHRRSASLGGGGGGGGAVSNNCNNGNANNGGSGCSSGANSTTSSRGGHDSSGGGGGGGGADGESYESDACSTDSNASSSNNNNNNNNNSSNNNNNGHHHHHYKRKSTDDDNGIIKRRMKTTINNNNIINENDTDNTTATAITNFQNQQQQQTITTTTITPPSIQKYCCPVCNRNDFISMLSLGSHMDREHPGIPAKCRQCDVVFKTHKSLNAHRCLNNKPLNITQGFKDIDFVDFSSEKFPLIAKSLCEQTIRTSITNQKFECPKCYRAFPCASAVDIHIKDCGEISVSSPPRDYSLQQRKRLPSESSSSEEENNRRDEFFAHLDLQNKSAMSITSTVSSSPRTSEKSEGKCNNADYEISTSYDHQQQRPQTHQQFNHHQQQHQEFQRFHRAFEKQESLHHQQSLNESKDLADIQSILNVTSSSSSFLRNFENCVNTPSSEYSYNKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLTAAGAGPYRCNMCPYTIHDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCDDPVKKIHLFSSPEFDNDDDHPAPKDRSTPVSHLKEMLQSTEKPVKIQVKSLEKLIDKTAASFESREKDFEISNRIESNGPIDLSVNQSSTSDVLDLSKKSKPAAPVVDPVEIKHDPEPPSPAEEQIKMGNIQPLDKNQLMFAQQQFLNDTFPKLDPAHFFQLSQIYRNMQLFPQFHPFLLPNSLMPNINDLNKFAPGMLMNPMFNAAADQQVSPQLPTSIPSRPQSQPLQSQLLGKPLIEASLQKPLTQSQPPPPPPPPTTQILQKSLTQPHNVPSTTQMTISHHPHLSRPASQPPLITQHQNSGPVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWAQRQRSGHHILRRGHGSSSTLSHQISSPQMPPQATAAPSMAPNHFNAISEQVKYALLAQQLKARKDTDILQQALAQNHEPANNTSNTTFNYNQSQNNTTPNNNTINIEDDDPKLVIDEREEEDEDDDEEEVQCEDIKPEDLSKQTNYAEENNCTAKKVAESILEQAIKAGNNSSQKQTNQLPNNTNNENHAREKDIPNFKAASNMITKAESVGKYLKEVASSSFKDDSSDLASVSKLVDNATNSLHFNNYFRASADFANQLEQSDEEGLVASGSASESNHSGTEESQGNGQEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDIPDPIPTPKSCFEDQETSKAPLQTPTIPLNLNIPNLKNEIVPVTSSDLPFKCHLCDSSFSERIHCLDHIKNHHAQEFALLLAKGAIDADADFNQMHSAEDDDNNKTDSGRGGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEVCLRKFTLKHSMLRHMKKHSGGHHNNQTNQTNSGSDISDDEQPTSMILANSLRNHKIQEILSKAEAWRNNHMNSEQKENIAIHRPLIKTDGKVGSGNNDPNNSGNGVTVASVAGHEENTDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00235334;
90% Identity: iTF_00235334;
80% Identity: -