Basic Information

Insect: Bombylius discolor
Gene Symbol: -
Assembly: GCA_939192785.1
Location: CALNDV010002230.1:20701-24357[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.2 70 4.1 0.2 10 23 13 27 11 27 0.91

2 10 0.0027 0.16 12.5 1.4 1 23 31 54 31 54 0.93

3 10 0.025 1.4 9.5 0.6 2 23 63 84 62 84 0.97

4 10 0.00015 0.0086 16.5 0.4 2 23 92 114 91 114 0.96

5 10 1.3e-05 0.00075 19.8 0.5 1 23 120 142 120 142 0.99

6 10 7e-05 0.004 17.5 4.3 1 23 148 171 148 171 0.98

7 10 0.00074 0.043 14.3 0.5 1 23 207 230 207 231 0.94

8 10 0.058 3.4 8.3 0.7 2 23 239 260 238 260 0.96

9 10 0.00029 0.017 15.5 0.4 1 23 267 290 267 290 0.97

10 10 0.055 3.2 8.4 0.1 1 12 296 307 296 313 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.2	70	4.1	0.2	10	23	13	27	11	27	0.91
2	10	0.0027	0.16	12.5	1.4	1	23	31	54	31	54	0.93
3	10	0.025	1.4	9.5	0.6	2	23	63	84	62	84	0.97
4	10	0.00015	0.0086	16.5	0.4	2	23	92	114	91	114	0.96
5	10	1.3e-05	0.00075	19.8	0.5	1	23	120	142	120	142	0.99
6	10	7e-05	0.004	17.5	4.3	1	23	148	171	148	171	0.98
7	10	0.00074	0.043	14.3	0.5	1	23	207	230	207	231	0.94
8	10	0.058	3.4	8.3	0.7	2	23	239	260	238	260	0.96
9	10	0.00029	0.017	15.5	0.4	1	23	267	290	267	290	0.97
10	10	0.055	3.2	8.4	0.1	1	12	296	307	296	313	0.84

Sequence Information

Coding Sequence: ATGTTTATAAATACACAAAAATGTTTTTCTGGGAAATATGCATCTAAGAAATTACTTCAAGCACATAGAAAATCATCACATGAACATAAGCATATATGTGAAATATGTGCTAAAACATTTCAAAGTCGTGAATTTTTTGAAAAACATCGTTTAGAAGTACATTTTGGAAAAAAATTACCACCAGTACAATGTGATATATGTAAATTTTGGAGTAAAAATGTATATGCATTACGTTCACATATGAAAAAACATCGTGAAGAAAATTTAGAACAAGAATGTGATATATGTGGAAAAAAATCACCATCAAAAAAGGCATTATTGAATCATAAACGTTATGTACATTTGAGCGAAAGAAGATTTAAATGTTCAATATGTTTGAGAGGTTTTAAACGTGCAATTGGATTAAAGgaacacatgacaacacatacaggagaaatattatataaatgtacgttctgttcaaaaacatttaattcaaatgcaaatatgcatgcacataaaaaacgtgcacatcctattgaatgggctaaagaaaaacttgaaaaaaAACATCAAATGTGTTCTTCATTTAAAACATTAAAATCGCATAGATCAAGTGTACATATAAAACGAAATGCCTTCATATGTGAAATATGTGCAAAAACATTTACAAATCGAATTTTTTTTGATAAACATCAATTAGAAGAACATATGGGTGGTAAATTACCAAAAGTTCAATGTCAAATATGTAAATTTTGGAGTAAAAATAGTTTATCATTACGATTACATATGAAAGTACATGAAGATGTTGGACAAATTCATCAATGTGAAATATGTGGTAAAAAAGCACCAACACGTCGTGCAATACAATCACATATTAGATATGTACATATTAAAGAAAGAAGATTTAAATGTGGTATATGTTCAAAAGCATTTAAAGAAGATGTTGCATTGAAGGTATGTATGAACCTAGAATATTTTTAA
Protein Sequence: MFINTQKCFSGKYASKKLLQAHRKSSHEHKHICEICAKTFQSREFFEKHRLEVHFGKKLPPVQCDICKFWSKNVYALRSHMKKHREENLEQECDICGKKSPSKKALLNHKRYVHLSERRFKCSICLRGFKRAIGLKEHMTTHTGEILYKCTFCSKTFNSNANMHAHKKRAHPIEWAKEKLEKKHQMCSSFKTLKSHRSSVHIKRNAFICEICAKTFTNRIFFDKHQLEEHMGGKLPKVQCQICKFWSKNSLSLRLHMKVHEDVGQIHQCEICGKKAPTRRAIQSHIRYVHIKERRFKCGICSKAFKEDVALKVCMNLEYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -