Basic Information

Insect: Bombylius discolor
Gene Symbol: -
Assembly: GCA_939192785.1
Location: CALNDV010000223.1:23100-27596[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.81 47 4.7 0.8 2 19 354 371 354 371 0.89

2 15 0.06 3.4 8.3 1.6 2 23 385 406 384 406 0.88

3 15 0.011 0.61 10.6 0.1 3 23 415 436 414 436 0.95

4 15 0.0001 0.0058 17.0 0.2 3 23 444 465 443 465 0.94

5 15 0.0031 0.18 12.3 3.4 1 23 472 494 472 494 0.96

6 15 1.6e-05 0.00093 19.5 6.3 1 23 499 521 499 521 0.98

7 15 0.42 24 5.6 0.0 2 23 531 552 530 552 0.95

8 15 0.00024 0.014 15.8 1.0 1 23 568 591 568 591 0.97

9 15 0.028 1.6 9.3 0.4 1 23 634 659 634 659 0.95

10 15 0.7 40 4.9 1.2 5 23 672 691 669 691 0.89

11 15 1.6e-05 0.00094 19.5 0.9 1 23 697 720 697 720 0.96

12 15 0.0012 0.068 13.6 0.2 1 23 768 791 768 791 0.92

13 15 0.014 0.79 10.3 1.9 1 23 797 819 797 819 0.97

14 15 0.46 27 5.5 5.2 1 23 825 847 825 847 0.95

15 15 0.11 6.5 7.4 0.3 1 23 853 878 853 878 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.81	47	4.7	0.8	2	19	354	371	354	371	0.89
2	15	0.06	3.4	8.3	1.6	2	23	385	406	384	406	0.88
3	15	0.011	0.61	10.6	0.1	3	23	415	436	414	436	0.95
4	15	0.0001	0.0058	17.0	0.2	3	23	444	465	443	465	0.94
5	15	0.0031	0.18	12.3	3.4	1	23	472	494	472	494	0.96
6	15	1.6e-05	0.00093	19.5	6.3	1	23	499	521	499	521	0.98
7	15	0.42	24	5.6	0.0	2	23	531	552	530	552	0.95
8	15	0.00024	0.014	15.8	1.0	1	23	568	591	568	591	0.97
9	15	0.028	1.6	9.3	0.4	1	23	634	659	634	659	0.95
10	15	0.7	40	4.9	1.2	5	23	672	691	669	691	0.89
11	15	1.6e-05	0.00094	19.5	0.9	1	23	697	720	697	720	0.96
12	15	0.0012	0.068	13.6	0.2	1	23	768	791	768	791	0.92
13	15	0.014	0.79	10.3	1.9	1	23	797	819	797	819	0.97
14	15	0.46	27	5.5	5.2	1	23	825	847	825	847	0.95
15	15	0.11	6.5	7.4	0.3	1	23	853	878	853	878	0.96

Sequence Information

Coding Sequence: ATGGGAAAAAGATATGGAAAAAGCAAAATTTTCAATGAAACAAATTGGGAATGTAAACATTGTTGCTGTCCAATTGATGATGAAAGCGATAATTCAATTGAATGCTGGAAATGTTACAACTGGTTTCATATTGAATGTACTCCATTAGATAGAAAAAAATTTATTGAAATTATTGATCAAAATCAATCATATATATGTTATACATGCTCCAATAAAAATGAAAATGTCTTTCTAACAATGGAAACAGAAATTATACAGGTTTCACCTGAAGATCAAAATAAAGAATTATCTATGGGAACAATAGAAATCATGCCCGTAGCTGATGCTAAAGAAATTTCTATGTCATTATTACCATTAAAATGTCTTCGATGTTTGATTAATTTAACAAATTCAACATATCAAAATGTTTTTGATAACACCGGCAAGGAGCTTGGACTTCAAAAATTACTTTCAGAATGTTTTGATATTGACATTAAAGAAGACGAAGAAGAAATGCAGGTACTTTGTAATGAATGCTTAAATGAATTAATTGAGACGTATGATTTAATGCAAAGAGATATAAATGCTACTAAAACTTCAACAACAGAACCTTCTAAAAATGTTGAGATTAAAACTGAAATTTTGAATAGTGACGATGAAGATTTCAGTGAAATAAATGAAGAAGATGAAGATTTCACAGAGATTATTAATGAAGAATTTTCAAATGTTGGAAATATTGATAATAAGAATGATTTGGATGAAAATGAATTTGAAAATGTATTTTATTTGGATGATTATGATGAAGTTTTTGATTTTAGAGCTTATAAACAAAAAGTAATTAAAAATCATAAATTTAATGAAGTTGTGTTTCCAAATCCAATTCAATGCAGGATTTGTGCAGAATTGTTAGGTGATCATATTGAAATAATTGAACATACACAAAATGTTCATTCTAATAACAATGACCAACAATATTTTTGTGTAATTGATGAGAATTGTGAGCCATTAAATGCAATTGAAGATTTATCATATCATCTTGTTTTCAAACATTACGATTTAAATGAATTGGTTATTATTGCTGAATGTCCAGACTGCAATAAACTTTTTCAGAATTTTCTAACATATAATAAACATTGCTGTGACACTTCTAGAAAATATTCACGATCAACTGTTGAATGCGAAGAATGTGGAAAATATTTTAAATCAAATAAACGATATCGGTTTCATTTACAATTTCATTTGGAAAAACGACGACCAAAAGCATGTCTTATTTGTGATATAATGTTTCGAGATGAAGATGAATTTTTCGAACATGTTAATTATGAACATGAAAAAAATAAAGAGAATATTTGTAAAAGTTGTGATTTAGTATTTACAACTCAAGAGAATCTTAATGTCCATATAGTCAGTTCACATGGTGAAGGAAGGAGTTACCACTCATGCCCGATGTGTTTTAAACTTTTTCCATCTCAACAACATTTAAGACAGCATAAGGCTATCCATGATAAAACGAGATTTAAATGTCATATTTGTGGTAAATGTCTTTCAAGAAAATCACGTCTGAATAAACATCTTATACGACATCAAAATCCTACTGAAAAAGATGTAATGAGTTGCACAATATGTGGTTTTGTTGCAGCTAATGAAGAAACTGCTGAGTCGCATTTACTTAAACATGATGAACATAATGCTTCTGTTGAAATTGAAACACTATTAATTGCATATGTATGTGAATTTTGTGATTCATCATTTAATACAATAGAAAATTTACTTAAACATCGTAAATCATCACATCCTACAAAAGAATATCTTTGTCCTATTTGTAATTTTAAAAACAGTAAATACAGTACAATAACATGTCATAAATTAGCTCATTCTCAATATAAAAATACAATAGAAGAATTTCCAGTTAGAAAACATTATGTTTGTGGAACTTTGAATTGTACAAAATCATACCCATTATGGACAAGTTTGAATTTACATAAGATGAAAAATCACGAAACAAGATTTAGAAAAGATAACTTAAATTGTATAAGATGTAAAATAAATTTCTCAACATTTTTTCAATATAAAAATCACATGGCTGAAAATCATGCCGGTAAATCAATATTTGATTGCAGTTTTTGTGATAAATCATTTAGAATTAAATCAGCTTTAACTCTTCATATAAAAAAAGGTCATAGAAAACCAATTGAAGCAAAAATTCAAAAAAAGAAAACAGAAAAGAAGATAACAAAGGTAATTGTGAAAGAATCAAATCAACAGAAACCAATTTTACCACAAAAAGGACATGGTTTACCTGGTCAATCAAGAACAAAAGATTTCAATTGTAATATTTGTAATAAACCATTTTACAATCGTTCTGATGCGTTAGTTCATGAAAAAGCGGTTCATGCTAAAGAAGTGAAATTCTTTTGTCCTACTTGTCCATTTAAAACACCCTATAGACAAACACTTACTTATCATTTAAAAACACATAAAAATGAATACCCATATGAATGTTCGATTTGTTCCCGTAAGTTCCGTTTTAAAAATTCTCATAAATTACATGAGCAACGACATCAAAATGTTAGAAACTATGTCTGTAATATCGATGGATGTCGTTTATCATATATCAATATAGGTCGTTTAAAAACTCATCAAAAACTTAAACATACACCTGGTGTAAAATATACAAGAGCAACTAAAAGATTTTACAATATAAATGCTTACACTGATAAATTTGTTGATGATGATGATGGCTTAGATGATGGTGTTATTGGTGAACCATCCACAGCAACAACAATAACAATATCACAACAAAAAAATAAAAAAAGTTATAAATCACAATATTTTAGGAAAATAGTTCAATCAGAAAATTTTGTAAATTCAAATGATAATATTGAAATAATAAGTGAAGAAAATATTATGATTAATCAAGAAGATAATCCAGATGATCCAAGTAGTGTTTATTTTAATTTAGAAGAAGTTGGAGAAGTTGAAGAAATTAATGGAGAACAAGAAATAATTAATTATAATCAAAATAATGAAAATAACCTTATAAAACCTGTTTTAATTATACGAAATAATGATTATATAATGGAATTAGATCATACAAAAATTTATGGTAATGCATTAGAAGTAACAAATATTCAAGAAACCGAAGTTGGAGCTACAGAAATTGTAGGGGAATAA
Protein Sequence: MGKRYGKSKIFNETNWECKHCCCPIDDESDNSIECWKCYNWFHIECTPLDRKKFIEIIDQNQSYICYTCSNKNENVFLTMETEIIQVSPEDQNKELSMGTIEIMPVADAKEISMSLLPLKCLRCLINLTNSTYQNVFDNTGKELGLQKLLSECFDIDIKEDEEEMQVLCNECLNELIETYDLMQRDINATKTSTTEPSKNVEIKTEILNSDDEDFSEINEEDEDFTEIINEEFSNVGNIDNKNDLDENEFENVFYLDDYDEVFDFRAYKQKVIKNHKFNEVVFPNPIQCRICAELLGDHIEIIEHTQNVHSNNNDQQYFCVIDENCEPLNAIEDLSYHLVFKHYDLNELVIIAECPDCNKLFQNFLTYNKHCCDTSRKYSRSTVECEECGKYFKSNKRYRFHLQFHLEKRRPKACLICDIMFRDEDEFFEHVNYEHEKNKENICKSCDLVFTTQENLNVHIVSSHGEGRSYHSCPMCFKLFPSQQHLRQHKAIHDKTRFKCHICGKCLSRKSRLNKHLIRHQNPTEKDVMSCTICGFVAANEETAESHLLKHDEHNASVEIETLLIAYVCEFCDSSFNTIENLLKHRKSSHPTKEYLCPICNFKNSKYSTITCHKLAHSQYKNTIEEFPVRKHYVCGTLNCTKSYPLWTSLNLHKMKNHETRFRKDNLNCIRCKINFSTFFQYKNHMAENHAGKSIFDCSFCDKSFRIKSALTLHIKKGHRKPIEAKIQKKKTEKKITKVIVKESNQQKPILPQKGHGLPGQSRTKDFNCNICNKPFYNRSDALVHEKAVHAKEVKFFCPTCPFKTPYRQTLTYHLKTHKNEYPYECSICSRKFRFKNSHKLHEQRHQNVRNYVCNIDGCRLSYINIGRLKTHQKLKHTPGVKYTRATKRFYNINAYTDKFVDDDDGLDDGVIGEPSTATTITISQQKNKKSYKSQYFRKIVQSENFVNSNDNIEIISEENIMINQEDNPDDPSSVYFNLEEVGEVEEINGEQEIINYNQNNENNLIKPVLIIRNNDYIMELDHTKIYGNALEVTNIQETEVGATEIVGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00235306;
90% Identity: iTF_00235306;
80% Identity: -