Bdis006334.1
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- -
- Assembly
- GCA_939192785.1
- Location
- CALNDV010000428.1:64988-70256[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0079 0.46 11.0 3.9 1 23 394 417 394 417 0.95 2 17 0.007 0.4 11.2 0.4 1 23 423 446 423 446 0.96 3 17 0.13 7.3 7.2 2.8 2 23 486 507 486 507 0.97 4 17 0.0018 0.1 13.1 2.7 1 23 513 536 513 536 0.97 5 17 4.4 2.5e+02 2.4 4.4 1 23 543 571 543 571 0.79 6 17 2.3 1.3e+02 3.2 0.5 1 23 667 697 667 697 0.88 7 17 0.01 0.58 10.7 0.9 1 23 705 728 705 728 0.97 8 17 2.4e-05 0.0014 18.9 1.9 2 23 734 755 733 755 0.97 9 17 0.00041 0.024 15.1 4.1 1 23 761 783 761 783 0.96 10 17 0.007 0.4 11.2 7.0 1 23 789 811 789 811 0.99 11 17 4.2e-05 0.0024 18.2 1.0 1 23 817 839 817 839 0.95 12 17 0.00072 0.041 14.3 4.1 1 23 845 868 845 868 0.97 13 17 0.0003 0.017 15.5 0.3 2 23 886 908 885 908 0.95 14 17 0.0021 0.12 12.9 3.7 1 23 914 937 914 937 0.98 15 17 9.8e-05 0.0056 17.0 2.1 1 23 943 965 943 965 0.98 16 17 0.0025 0.14 12.6 4.1 1 23 972 994 972 994 0.96 17 17 0.00038 0.022 15.2 1.3 1 23 1000 1022 1000 1022 0.98
Sequence Information
- Coding Sequence
- ATGACTGAAACTAAGCACACTGAAGAATACATGTTTGAGCATTCATGCAGAACTTGTTCAAAATTATTTCATGAAGATGAGGCTCTTGTTCCAATATTTGATGGTTTTGAAGTTCATACAATTACAGATGATAAATTTTCTTTAATTACTGAATTAATATCGTTAGATATTCAAATTCAATTTAATGATGGACTACCACAAAAAATTTGCCTTAATTGTGTTGAAAAAGTATCAAGAATATTTTTATTTCGAAATTTATGTAAAACATCATTATCAGTTTTAAAAAATATTTTTCAAAGTAAAAATTTTAAAATTCAAAAAAATAATATGAGATATGATAATTTCCAATCACAAATAATTAAATATGAGTCAGCTTATGATAATGCTACAATGCAAGAAAATATACCAATAGAAATAAATAAATTTATTattagtgaacaaaatatcacatctgctggtaacaataatgatgatgatgatgatgatgaagaattcataaattttcatGGAAATGTAGTAAAGGGTAGTGATATTAAAAAGGATAATAAAATAACCCAAGAGGAAGATGAAAATTATTTTATAAATGATGGATATTCTTATACACCAATAAATTTTTCACCAATAAATTCATCATTTAATAATAAAAAACCTGAAAAAATTATAGAAAATAATAAAAAAATTATTAATAAACAAAGTAACATAAAAAATGTCAATTATATTTCACAAGAATTGAAATATATTGAAAATAATGAAATTATTCCAAGTACAATGGGTATCAGTGATAGCACATTTATTGATGAATTCTTTAAAAGTATTGAAGAAAATCTTGAATGTTTATATACAAATCAAATAGATAATAATGAAGTACAAGAATTAAATGTAATTAATAATAATAATAATAATAATAATAGTAATGAAAATTGTATAAATAATATAAATACAACAGAAATTGATCAAACAATATCAACACCAATATCGCTATCATCATCAACAGTAACAGAAACAACAGCAAAAACAACAACGAAAAAACCAGATAGAATAAAATTAAAATTTGATAATAATAAATCTCAAATAATAATTGCTGAAAAATGTTTAAAATGTAATAAATATGCATATAAAAATTTAAAACATGGTTCAAATTTATGTGATCGTATAAAACCATTTATTGATTCAAAAAAATATTGTTGTTATTATTGTAATGAATTATTTAATACAAAATCATTATTACGTATACATTTTTTAAGATTACATCCATCAATAAAACCATATGCATGTAAAATATGTGGTGGAAGTTTTTCAAATATAACACAACAGCATGAACATATTGAAACAATACATAAAGATATAAATGATAATGATAAAAAATTATATCAATGTTTAATATGTATGCAATATTATATATCAAGACAAACATTATTTAAACATGAAAAATGTCAGCATATACAAGAATTAAATGAATGTAAACAATGTAATAAGAAATTTTTAACACGTTTACGTTATCGTGTACATATGCGTTTACATAAAATTATAAAACAATTTAAATGTGATTATTGTTTTAGAACATTTGATGATAATTTTAGTAAATTACGTCATATTAAAATATCACATAAAAATATTAAATATAAATATAAATGTAATTATTGTATAGCAATAAATAAAGATAAAAGATTTAGAACTGAACAAGGTTTACGTCATCATATAACATTAATACATAAAACAGAATATTTAAATGAAAAATATAAAAATGATAATATAATATTAAAAACACAAGAAATTGATGATGAAATTAACATGAAATTACCATCAAATTTAAAAAGATGTATTAAATGTTATAATATATATTATAAAAATTTAAATAAAAAACATGATAAACTTTGTAATGGTAATTTATATGAAAAACCAATGAAAAATTATTGTTGTTTATATTGTAATTATTTAACAAATGAATTAAATGATATTATTGAACATATTCATAATATACATGATAATAATAAACCATATACATGTTTAATATGTAAAAATGAAAATGATAAAATTAATGAAATATTTAAAACATCAAGATTATATGATATACATTTACGTAAAAAACATAAAGATATTATACATGAATTATATAAATGTAATATATGTGATAAAAATATGTCATCAATTGTTAATGTTATTAGACATAAACAACGTTTTCATATAACAATAATAAAAGAATGTAAAATATGTGGTAAAAAATATCGTAATCAACCACAATATAAATATCATTTAAAAACACATTGTGATAAAAAAAAATATGCATGTAATTATTGTGATAAATCATTTTTGCAAAAACATCATTTAAATAATCATGAATTAGTACATACTAATTATAAATCATATGAATGTGATATATGTCATACGAAATTTAAACATAAACAAAAATTTGATTTACATATTAAAAAACATAACGGATGTAAACCATTTTTATGCAATATTTGTGCAAAATCTTTTACAAAACAAATACTTCTTAAAAAACATCTTGAAACACACGATTTAACACCAAAATATAAATGTGAAGATTGTGGTGAACGATATCATTCAAGATCATCATATTATAAACATCGTAATGTTAAACATTTAGATAAAAAATATAATAGATATGGAAAATCAATATTAGATGAAAAATGTATATGTCCAATATGTTCAAAAATATTTGCATTACCATTAGCATTACAAAAGCATATGAATTCAATGCATGATAGAACACGTAAATATAAATGTTCACAatgtgaaaatttttattcaaaaactgaacatttaaaagttcatattagaaaggatcatacaaatgaaagaccatataattgtgaatattgtgataaaaaattttttgattcatcaagtcgaaatgtacatgtaaaaactcatttagAAGTCCCTCCAAcatataaatgtgaaatttgtgataaatcatatagaacagcatgttcattaagatttcataaaatgagtcatactggtgcaaaaccttttaaatgttcaatttgtgaagcaaattttaaatattatgtacaacttaaaGCTCATTATCTTAAACATTCAAAAGAAGAAAGAGAAAATGATAAGAAAAAAGTTTTAGAAGGAATTAACGGAAATATTGAAATTAATAATTTATCATCAATTATTAAACAACAAACGGACGTAATAGAAACAGATAAGAAGATTAAAATTGAAAATTTAATTCTTCAACACGAAATGGATGTAATAGAAACAGATACAATTATTAAAGATGATAATTCAATTTTTCAACAACGAATGAATGTAATAGAAACAGATACAAATATTAAAAATGATAATTCAATTCTTCAACAACAAATGAACGTAATAGAAACAGATACAAATATTAAAAATGATAATTCAATTCTTCAACATGAAATGGATGTAATAGAAACACATATAAAAGATAATTCAATTCTTCAACAAGATATTAATGTAATGGAAATAAATATGAAAGATTTATTTGTTCAACAAGATATTGTTGATGTAAATGATACAACAAATATAAATAATCATTTTATTCAACAAATAATTGATGAAAAAAAATTAGATAATGAATTTTTTTTACAACAAGAAATGGATAATATTATAAAAACAGATAATGATTTTTCAATTCAACAAGAAGTTTTAATTGGATATGCAACACAATCGAATGTTGATGAACTTTGTCAAATTTATCAGTCATAA
- Protein Sequence
- MTETKHTEEYMFEHSCRTCSKLFHEDEALVPIFDGFEVHTITDDKFSLITELISLDIQIQFNDGLPQKICLNCVEKVSRIFLFRNLCKTSLSVLKNIFQSKNFKIQKNNMRYDNFQSQIIKYESAYDNATMQENIPIEINKFIISEQNITSAGNNNDDDDDDEEFINFHGNVVKGSDIKKDNKITQEEDENYFINDGYSYTPINFSPINSSFNNKKPEKIIENNKKIINKQSNIKNVNYISQELKYIENNEIIPSTMGISDSTFIDEFFKSIEENLECLYTNQIDNNEVQELNVINNNNNNNNSNENCINNINTTEIDQTISTPISLSSSTVTETTAKTTTKKPDRIKLKFDNNKSQIIIAEKCLKCNKYAYKNLKHGSNLCDRIKPFIDSKKYCCYYCNELFNTKSLLRIHFLRLHPSIKPYACKICGGSFSNITQQHEHIETIHKDINDNDKKLYQCLICMQYYISRQTLFKHEKCQHIQELNECKQCNKKFLTRLRYRVHMRLHKIIKQFKCDYCFRTFDDNFSKLRHIKISHKNIKYKYKCNYCIAINKDKRFRTEQGLRHHITLIHKTEYLNEKYKNDNIILKTQEIDDEINMKLPSNLKRCIKCYNIYYKNLNKKHDKLCNGNLYEKPMKNYCCLYCNYLTNELNDIIEHIHNIHDNNKPYTCLICKNENDKINEIFKTSRLYDIHLRKKHKDIIHELYKCNICDKNMSSIVNVIRHKQRFHITIIKECKICGKKYRNQPQYKYHLKTHCDKKKYACNYCDKSFLQKHHLNNHELVHTNYKSYECDICHTKFKHKQKFDLHIKKHNGCKPFLCNICAKSFTKQILLKKHLETHDLTPKYKCEDCGERYHSRSSYYKHRNVKHLDKKYNRYGKSILDEKCICPICSKIFALPLALQKHMNSMHDRTRKYKCSQCENFYSKTEHLKVHIRKDHTNERPYNCEYCDKKFFDSSSRNVHVKTHLEVPPTYKCEICDKSYRTACSLRFHKMSHTGAKPFKCSICEANFKYYVQLKAHYLKHSKEERENDKKKVLEGINGNIEINNLSSIIKQQTDVIETDKKIKIENLILQHEMDVIETDTIIKDDNSIFQQRMNVIETDTNIKNDNSILQQQMNVIETDTNIKNDNSILQHEMDVIETHIKDNSILQQDINVMEINMKDLFVQQDIVDVNDTTNINNHFIQQIIDEKKLDNEFFLQQEMDNIIKTDNDFSIQQEVLIGYATQSNVDELCQIYQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -