Basic Information

Insect: Bombylius discolor
Gene Symbol: -
Assembly: GCA_939192785.1
Location: CALNDV010000419.1:204057-210871[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.6e-05 0.0021 18.4 2.9 1 23 461 483 461 483 0.98

2 10 1.7e-05 0.00097 19.4 0.4 1 23 489 511 489 511 0.97

3 10 6.7e-05 0.0038 17.5 1.7 1 23 517 539 517 539 0.98

4 10 2e-05 0.0011 19.2 3.1 1 23 545 567 545 567 0.97

5 10 0.00023 0.013 15.9 4.9 1 23 573 595 573 595 0.98

6 10 8.2e-05 0.0047 17.3 5.7 1 23 601 623 601 623 0.97

7 10 3.8e-07 2.2e-05 24.6 4.3 1 23 629 651 629 651 0.98

8 10 1.4e-07 8.3e-06 25.9 2.4 1 23 657 679 657 679 0.97

9 10 0.00074 0.042 14.3 4.4 1 23 705 727 705 727 0.99

10 10 3.1e-06 0.00018 21.7 2.1 1 23 733 756 733 756 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.6e-05	0.0021	18.4	2.9	1	23	461	483	461	483	0.98
2	10	1.7e-05	0.00097	19.4	0.4	1	23	489	511	489	511	0.97
3	10	6.7e-05	0.0038	17.5	1.7	1	23	517	539	517	539	0.98
4	10	2e-05	0.0011	19.2	3.1	1	23	545	567	545	567	0.97
5	10	0.00023	0.013	15.9	4.9	1	23	573	595	573	595	0.98
6	10	8.2e-05	0.0047	17.3	5.7	1	23	601	623	601	623	0.97
7	10	3.8e-07	2.2e-05	24.6	4.3	1	23	629	651	629	651	0.98
8	10	1.4e-07	8.3e-06	25.9	2.4	1	23	657	679	657	679	0.97
9	10	0.00074	0.042	14.3	4.4	1	23	705	727	705	727	0.99
10	10	3.1e-06	0.00018	21.7	2.1	1	23	733	756	733	756	0.96

Sequence Information

Coding Sequence: ATGAATGAACATACTGTATCTATTGAAACGGCTACAAgcccaaatggtgattctcaaaggcaacattctccaccgcaacagccacaacaacagcagcagcagcatcaacatcatcatcagcaacatcatcatcatatagatgagcagcaacagcagcatcaacaacagcatacACAAACTCATGAGAATCGAGGACTTGGAGGAGTTATTCAACCCGTAAGCGAAGCTGATAATAAACATTCAATACAAATTCCTAATGCGTCTCATCTTGGAAAATATTGGGTTGTCACGAATTTATTTCAAGGACCCGGACAAAATGTTTATAATATAACATCAACATCACCATCACCTTCAAATAATGCAATGTCTGGTCCTTTGCCATCGAATACAGTGAATATTATAACCAAAGATAATATTAAGCAAGAGGATGTTGTTATGCAATCACCACGTCATCATACCCAAATTGGTCCATCTACAAGTAATAGTGCTTTACAACAAATATCAGGTCAAATAATAACGACAACAAATCAACAAATAACTAATGGTACTATAATATCAACTACTGGACAACCAGAACATATTCAAGTTTCTGTTAATCCAGAAAATAGTATGATGATTGTTGATACTTCAAATACAAAAACTGAAAAAATTAATATAACATCTCAAACAATAAATGCTGATGGAACAATGACTATAACTAGACCATCATCATCACATCACAATACAATTCAAACTGATCATGTTAAAGAAGAAAAACCTTTTGCCAATTGTAAAATTGCTCCACATCAACAAATTCATACTACACAAACAACACATCATATTCCTGCAGATACAAAAATGCATATACCACATATATTGGATGTTCGTGGTGCTGATGGATCAATTTTAAAAATACAATCACCACCTGATCAAGAAATGGGTAAATCACTTGGAGTTGAGATGTATAAAGTGAATATTGAAGATATAAGCCAATTTTTAACATATCATGAAGTTTTCGGTAAATTACATGGTGATGTTGTCATGAATCATCAGATATCTCATACAACAACACAACCAACAAATACATCGGTTACAAATGTTGCAGGAATAACAACATCATCAGCAAATTCTAATACAGTTATTAGTAATATTGTAAATGTTCCAGGAACAGTTGTTAGTGGTACAACCGGAACAACAACATGCACAACAGTGGGAACAGCAGGAACAACAATTGTTGGTGGAGGCCCTGGAGAGCTTCTAATGCCAAAAATTGAAACAATTACACAAATTCCAGGAATGTCAACAGCTACATGTGCTACAACATCAACTATAACCACCACTGCAAATCCTCAGGTTATTGTTGGTGATGCAGCTGCTGGCGTTACTGTTACCCCAGCAACGCACACCTGTGATATTTGCGGTAAAATGTTCCAATTTCGATATCAATTAATTGTTCATCGTCGATATCACAGTGAACGTAAACCGTTCAACTGTCAAGTATGTGGTCAAGGATTTACGTCTTCACAGGATTTAACACGTCATGGAAAAATTCATATTAATTGTCCAATGTTTACATGCACCGTATGTTTTCATGTATTTGCTAATGATGCAAGTTTAGAAAGACACATGAAACGTCATTCAACTgataaaccgtttgcatgtacaatttgtcagaaaacatttgcacgaaaagagcatttggataatcattttcgtagtcacacaggtgaaacaccattcagatgtcagttttgtgctaaaacatttactcgaaaagaacatatggttaatcatgttagaaaacatacaggtgaaacaccacatcgttgcgatatttgcaaaaaatcatttactcgaaaagaacattATGTTAATCATTATATGTGGCATACAGgcgaaactccacaccagtgtgaagtttgtggcaagaaatatacacgaaaagaacatcttgctaatcatatgagatcacatacaaatgatactccattcagatgtgaaatttgcggaaaaagttttagcagaaaggaacattttaccaatcatatactatggcatacaggtgaaacacctcatcgtaatttGTTATTCCATCAAAGAAGTCATACTAAAGGTCAAGATGTTGAACGTCCATTTAAATGTGATAAATGTCCAAAAGATTTTATTTGCAAAGGTCATTTAGTATCACACATGCGTTCTCATTCTGGAGAAAAACCTCATATATGTACTTTATGTAACAAATCGTTTGTTGAAAAGGGAAATTTAAAACGTCATATAAAAATGAACCATCCAAATATTATGATACCAACTACTGTAATGGCAACTACAACAACAATAAAAGTTGAACCTAATACCACTCAACCACCAACTATGGTTACAACAACAATAACACCACAACAAAATATACATGAAAAAATTCAAATATTGAGTAAAGGGAATTTACTTCCAATTAATAATTTGGTTGTTTCTCAATCACCAACAATTCATACAATTCAACAAATCACATCAAATGCTGGAACTTCAAATTCAAAtactgccgctgttgatactgttactgctagtggtaattcaactactcagattacggcaggtttagttccgattgtcacttcaactataacatcacattcaagtcaacaacaacaccaccaacaacaacagcaacaacagcaacaacaacagcagcagcagcaacaacaacagcaacagcagcaacaacaacagcagcagcaacaacagcggcaacaacaacagcaacaacaacaacatattacaacacaaattcaccaagtacaaccttctcatcaccagcaacagcaaaccaatacaaattcatctgatcaatctgctactacacaacaacctgtaccaattgcaattattcaagcaggagatccttcatcaatagcaagagctgcTATTCAATTACAACATTTACCAGCTAATGTTGAACAACATCCAGTGCATGTTTTAGAGCAAAAAATTATTGAAACGATGAAAACTGAAAATTTGCCAGTAGTTACATCAGTGGGACCAAGAAAATATGAACAATGTACCACAACTCCATATGTATTTCAACGGCTTTAA
Protein Sequence: MNEHTVSIETATSPNGDSQRQHSPPQQPQQQQQQHQHHHQQHHHHIDEQQQQHQQQHTQTHENRGLGGVIQPVSEADNKHSIQIPNASHLGKYWVVTNLFQGPGQNVYNITSTSPSPSNNAMSGPLPSNTVNIITKDNIKQEDVVMQSPRHHTQIGPSTSNSALQQISGQIITTTNQQITNGTIISTTGQPEHIQVSVNPENSMMIVDTSNTKTEKINITSQTINADGTMTITRPSSSHHNTIQTDHVKEEKPFANCKIAPHQQIHTTQTTHHIPADTKMHIPHILDVRGADGSILKIQSPPDQEMGKSLGVEMYKVNIEDISQFLTYHEVFGKLHGDVVMNHQISHTTTQPTNTSVTNVAGITTSSANSNTVISNIVNVPGTVVSGTTGTTTCTTVGTAGTTIVGGGPGELLMPKIETITQIPGMSTATCATTSTITTTANPQVIVGDAAAGVTVTPATHTCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTSSQDLTRHGKIHINCPMFTCTVCFHVFANDASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRNLLFHQRSHTKGQDVERPFKCDKCPKDFICKGHLVSHMRSHSGEKPHICTLCNKSFVEKGNLKRHIKMNHPNIMIPTTVMATTTTIKVEPNTTQPPTMVTTTITPQQNIHEKIQILSKGNLLPINNLVVSQSPTIHTIQQITSNAGTSNSNTAAVDTVTASGNSTTQITAGLVPIVTSTITSHSSQQQHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQQQQQQQQHITTQIHQVQPSHHQQQQTNTNSSDQSATTQQPVPIAIIQAGDPSSIARAAIQLQHLPANVEQHPVHVLEQKIIETMKTENLPVVTSVGPRKYEQCTTTPYVFQRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00235266;
90% Identity: iTF_00235266;
80% Identity: -