Bdis007946.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombylius discolor
Gene Symbol
-
Assembly
GCA_939192785.1
Location
CALNDV010000594.1:77153-89832[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2.7e-05 0.0016 18.8 1.0 1 22 461 482 461 482 0.96
2 19 2.8 1.6e+02 3.0 3.9 1 23 514 537 514 537 0.90
3 19 0.0045 0.26 11.8 2.7 1 23 626 649 626 649 0.96
4 19 0.00014 0.0082 16.5 1.8 1 23 661 683 661 683 0.95
5 19 0.26 15 6.3 0.4 1 20 713 732 713 734 0.91
6 19 0.26 15 6.2 9.9 1 23 917 939 917 939 0.98
7 19 1.3 75 4.0 0.8 1 23 1052 1075 1052 1075 0.93
8 19 1.6e-06 9e-05 22.7 0.4 1 23 1084 1107 1084 1107 0.97
9 19 0.00022 0.013 15.9 1.1 2 23 1148 1170 1147 1170 0.96
10 19 0.0029 0.17 12.4 2.7 2 23 1198 1219 1197 1219 0.95
11 19 0.0067 0.39 11.2 4.3 2 23 1299 1321 1298 1321 0.97
12 19 0.012 0.67 10.5 3.3 1 23 1344 1367 1344 1367 0.97
13 19 0.0016 0.091 13.2 1.8 1 23 1378 1400 1378 1400 0.99
14 19 0.0019 0.11 13.0 5.8 1 23 1465 1488 1465 1488 0.97
15 19 0.22 13 6.5 6.9 1 23 1503 1525 1503 1525 0.98
16 19 0.25 14 6.3 2.1 2 23 1591 1613 1590 1613 0.92
17 19 0.0012 0.067 13.6 0.4 3 23 1692 1713 1691 1713 0.96
18 19 0.00038 0.022 15.2 0.3 3 23 1760 1781 1759 1781 0.96
19 19 0.00047 0.027 14.9 2.5 1 23 1839 1861 1839 1861 0.96

Sequence Information

Coding Sequence
ATGGATGTTAGAAATAAATTTAAAGAAATATGCCGTTCATGTATGAAAAAAGAAAAAGCTATGAAAAGAATATTTAATTCAGAAATAAATTCTGTACCAATATCACAAATGTTATCATTTGCAACATTAATTAATGTTAGACCAGATGATGGTTTACCATCATCAATATGTTATATTTGTTTAAATCGTTTAATTGGTGCATATAAATTTCAACAAATGTGTGTTGATTCAGATTTATTAATGCGTTCTGAATTAAAAGATTATTATAACAAAATTAAAACAAAATTAACAATAACACAAAATATATTAGATGAATTACGTTCAAATGTTATTGATGGTATACCAAGTGATTCATTtgatgaagatgatgataataaagatatttatgaaataacatctatatcacaaacatcatcaatatcaacagataataatgataatgataatgataataataaAAAACAACATTTAAATAATGATCATGAATTATTAAAAATTAAAAAAGGATCAATAAAATCAACAGAAACATTAAAAAAATCATCTAAAAAAAATATTATTGATGATAAATGTACAACAAATGTACAACAATCCAATGATACTGATATAATAGTTAAAATTGAACCAGATATTGATATTGAAGAAAATATAGAACAATTACAAAATGATAATAATAAAAATAATAATTTAGATTTTATGAAAAAACAACATCAAGAAAATCTAAATGAAAATAAAAATAAAATAAAACAAGAATATGATGATAAAGATGAAGAAATTTTATTTACAGTTATGACAAAAggtgatggtattgaagatataacaacaaaattaaatcaacaacaacaacagcaacaacaacaacaacgtgcatcagttaatttaatacgaaaatcattaccaaaatcatcatcatcatcatcatttttatcttcaaatatacaaagttcatcatcaataATTACAAATAATAATTGTACATCAATTCCAAAGATATCAAATGCAATTTCTTTAGCTCCACAATCTTTtcaacaacaacaacaaaattgtctatcattaccatcatcatcatcatcatcatcaacattacaacaacaaaatcgtctatcattaccatcatcatcaaaatcaacaacaattatagataatctttcaaAAATATCTTCAATTAATAAAAGATCATCAAATCCAAATCCATTCAATAGTAGTAATGTTATTTCAATTCCATCAAAATCAATAGCAAAAACAAAGGCATATTTTAAAAATAATGCAACAACAACAACAACACAAACAAAACAAATAATATCAAACACAAAATCAACAACAGTCCTAAATTGTAATGATGAAATTGATAAAGATGATGAAGTTAAAATGAAAATTGTTGCATATGTTTGTAATGTTTGTAAAAAAGTATTTACAGATAAAAGTTATTTTATAACTCATAAAAGAATGGAGTGTCCAAGACTACAAAACTCAATTTCTAAGGATAAAGAAGAATCTAATAGTGTTTCTGTGAACTCGGATGATTTAAATATTCGTTTTATTCATAAATGTATATTATGTAGAACTATGTATAAACAAAAATGTGATTTAGAAGCGCATATTTATTTAAAACATAAATCAAAAGCCTATAAAATTATAAGTCGAGAAACACAGAAAATACCAGAATATCGAATTATTGTTTCGTATATACCAGTGAAAAGATTCATTGAACAAAACAGATCAAGAAATCAAATTTATAAAATtgaaaattttgatcatgatattatctatattgatgatgatgataatagaacgtctgttatatctaaaacagcaacaacaacaacaacaacaacatcattatcatcaaaatctaATCCATTAACTAAAAATTTTATTCATCAATGTAATAAGTGTAAAAAATTATTTTCAAATTTATCAATATTAAATAAACATATTATGAATGATCATAAAAATATAATATTTACAAAAACAAATCAATTACATGATTGTAATTTATGTAATAAAACATTTGAAACATTAAATGATTTAAAATCACACATTAATGAACATCAAATAAAAGTATCTTATGGTACTGATTCCAAATCAGCAAATCCTTCAGTTAATGTGAGTGTTAATGTACATACAATTAATAATTCATATACATGTCAATATTGTAAAGTAGAATTTAATTCATCAAATGAAATTTATGAACATTTATCGCAACAAAAATGTAGACATTTTCGTACATcaataaaatcaatatgtaatcaaattatgacagttaataattctgaaaatgatgatgatgacgatgataatgatattcaatatcaacgacaacaacaaaaacaacagcaacaacaacaaaaaccatcaacatcaaaatcacaaaatagaaattcaacaacatctgtaacaggcgatattattGATTATATTGATTTAGAAAATTTAGATAATGAGTTTACTGATTCAATTGAAATCAATGATGACGATGATGATGATGAAGTTACACAAATTGTAATTACAAAAAAAAATAAACCAGGGGAAAATATTCTCAAGCAAAGGAGATTAGAAAATGCTGAGATTCCACACTCAAGATCATATTTAAATAATTCCCAACACAATAATGATGATAATAATGTTTATATTGAAAATGAAAATGATTTATTATCAGAAAATGTTGCTAGATGTTCAAAAAATTCAAAAACAAAAACTTTTGCTGAAAATTATCAAATTTTTGTAGAAAATGATAAAATAAATTCACCTTATGTATGTCACATATGTCGTAAAATATGTTACAATTTTCATACATTAAAAAAACATTATCAATATCATAATCAGACTACAAACAAAACTAAAAATTTATCATTTAATCGTAAACAGCAACAGCAATCAATTACAGATGTTTCATCAATTTCATTACCAGAAATACGCCCTACTAAATGTGAAAATTATGATGGAGAATTTGTTGCTATTGATGATGAAAATGATAGTTTTAATATTCAAAAAGAAAAAATTGAACCAGATGAAGAGATACCTATGGAAGAAGATCCAATTAATATTGAAGAAGATCCAATTGATATTAGTCAAGAAGAGAAAACAATACCAAATTTATATTATACAAGTAATAATAATGATAAAAGTTCAATGGATCAGACAAATCAAAAGAAACATCAATGTGATGTATGTGGATTATTTTTAGCATCTTATCGAGGAGTATTTAGACATAAAGACAGATGGCATGGAGATAAAGAACCATATTTTGCATTTATGTGCCCTCAATGTGGTAAAGGTTTCCGTAATAATGAAGCATTAAATCGTCATACAGAAACTCAACATACAATTAAAAAAGAAATTTCAATACCTGAAACAATTAAAAGTGAAGATAGAAAATTCGAAAATCCTAATTTGAATGAAACGAAGACAACAATTGAAAAAGAAGTTGCGGATATTAATATTAAGTGTAAATATTGTGATCGTATTATAAATAATCGTTTCAATTTACGACGACATGTACGGATAAATCATAAAGAAAATTATGAAAAATATATTATGGAACAAATTCAAAAGCAAGAGAAATTAATTAAAAAAGAAAATGAAATAAATTTGAATTGTTGCGTTTGTGGAAAACAATTTGAAACCAAGGAATTACTTTCACATCATGTAGAAATGCATAGGCAATTTATTAAAGAAAGGCGTCATGTATCCTTAAACCGGAAAAAGCGACGTAATAAAGGATTTAGATTTGTGAAAAAGAAAAAATATGCAACACCACGAAATAATGATATGTCATTGTTGGTACCATTAAAAAATCAAGATAAAACTGATAATTCAGCGATTGATGGTCGTAATAGTCGTACGAGTATTCCATCAACATCATCATCACCATCATTATTTTCCTTAAAAAATATGAAATGTCCAATCTGTTGTAAATCTTGTACAAGTATGGATATGTTAAAACGACACATAAGATCTGTTCATATTATAAAAGGACATATTAGAAAACAGAACTTAATTATGGATAACATTGAAACACAAGGTATTCAATTTGAATGTCATATTTGTTCAAGTCGTTTTAATTCTTATGCAAATTTTGTAAAACATAAAAAAGTCAATCATGGAAAAGAAAATTATGTTGAAGAAGCATGGTATCAGTGTGAAACATGTAAAAAAAGATTTTTAGTTAAATCAAATTATGAAGCACATAGAAAAATTCATGAGACAAATGCAATAAATAATTTATTaacaagatttgcatcattaacatcaacagcagcaacaacaacagcaacagtaaataatgataaaaaaaTTGATGATGAAGAAGAATCAAATGGAAAAGAATCAGCAACACCAACAAATCAAGGAAATGAAAATAATGAAAAAGATTATCCAGAATTTAATGAACCGCATAGATGTGTAATTTGTAGGAAAATATGTTCAAATCGTCAATCATTATCGCGACATATGAGAAAAATGCATCTAAAATATATTAGAGAAAAAGTATCAAAAGGTTCAAAAATTCATCAGTGTCATATTTGTACAAGGATTGTAACAACACCTTACAAATTAAAATGCCATTTACGTTCGCATATACCAGATGAAGATGAATTACGTAATTTTGAACAAAGTAAACAATTAGAAAATGAACAAACACCAGCAACAACACCAATACCAACACCTAAAATTCAAAAACAATCACAAAAATCGAATATTATTGGAAATATAAAAACTGATAAAGTTGAAAAATATTCAAATGGTAGAAAAAAAATTTTAACATATCCATCATATTGTAAAATTTGTAAACATCCATATTCAGCAAGTCATAATACACGTCGCCATATAATTGCAGAACATAAAATAAAATCAAATGAAGTTAGTCAATTTATTGGTACACGTAGTATACCAATTAAAGCAAAAACATCACAACGTATACGATGTAAAATTTGTTGTAAATTTTTTCACAATATAAAAGCATATAAAAATCATTTAACATTAGATGATGATAACATTTTATCATGTAAAACAGTAAAATTTGATTTAAATAATATTACAATTGATAAATTAATATATTCTGATACAGATAATGCATGTAAACTATGTGGTAATACATTTTTTAAACCAGCTGATTTAAAACGACATTTAATTATGAAACATCGAAAAATAATTGAAGAATATAGAGCAAaagaaaaagaaaatcatgagataaattcaacgattgatactgattcagttgctgatactgttgatactgttgatactgttgATATGGCTGATGAAGAAGAAGATAATGCATGTAAAATATGTGGTAATACATTTTTTAAACCAGCTGATTTAAAAAGACATTTAATTATGAAACATCGAAAAATAATTGAAGAATATAGAGCAAAAGAAAATCAAGAAATAAATTCAACTGTTGATACGGCTGATGAAGAAGAATTGGAGGAGGGTACATTAACATCAACATCAACACGACAACCACTGAATAAAAGGCCAAGATTAACATTGAATGAAAGTGTATCGCTACCAGTTTTTATTTGTAAAATTTGTGGAAGAAAATTCAATAAAAAAGTTCATTTATCTGGACATCAAGAATACCATAATAAAGGTTATGTAAGGAAAACAAAAGTTGGCTTAATATGTTGTAAAATTTGTAATAAATATATAAAAGAGAAAGTAACAATTTATCATTTTAAATTTTATCATGCATTTAAAGATGAAATTATTCAAAATGGTGAATTTAAAAAATATTTAGAAATTAAAAAAAATatgataactgttgctgaaaagcgtaatgctgaacaacaaggaaaacaattaaatgaaaatgatgatgattttgatgatgatgatggtgtaattaatgaaaatttatcaacaacaaatacaattgatttaaatgttgaacaattattatcaataccgttagttccaaaaagaactcgtataacacgacatagtacatttatagaagttaaaaatgaacaagaagaggaacagttagaatcaaataatgaagataatgatgatgatgataatgatgatgatgatgatgatgatgatgatgatgttgatgatggagaaaatatgtcaggaggagaacaagaaaaatcattggagaaaaataatgacaaagacgatacgaataatttgaatgatgaagagaatttaaatgatatcgaacagcaaagtaataatatcattgatgataCTTCAAAAAATGTTCCAAATATTGAAAAAATAATCGAACAACAGGTAAAAAAACATTTAGAAACTAAACAAAATGAAAAATTTGAACAAAAAATCGAAGAAGAAAAACAAATTGTTGTTAATAGAATCGAAAAGAAATCATCAGAAATTGTTTTTAATAATTTAAAACCAGCTGCTGTTGTATTTGATGAGAAAAAACTTAAAATAAAAGATTTAGATCTTTTATATAATAATTGTGGTAATGAAACAAGAACAATAGAAAATCGTAAAACACCAATTGTTATTGTTGAAAAATTAAAAACACCAATTAAGAAAAAAATTATTAAAAATAATGAAAAAAATTATGATTATTCAGAACAAAAATCAAATAAAAATGAAAATGTTATTGATGATAAAAAATCAAATAATGAAAAAGAAAAAAATTTAGAACAAATTTTGATGCAGGAAATTACAATAAATGAAAATGATAGTGATGAGAAAAAATTAGATGATAAAAAAGAACAAAATTCAAAGGAGAATGTTACTAAAAATGAGAAAAATTTCAATTGTGATGAAAAAGAAAGAGAAGAAATCGAATTAAATGAAGAAAATAATTCATTAGAGATTAGAAACAATACAAAATTAAATGATGATAATGATAATGATGATGAACAATTGAAAGCAAAAGAAATTGTTAATGAAAATCAAATGAACGGCAAAGCAATAATTGATGATTCAAAAATTACCAAAAATGATAATGATGAAAATTTAATGACTGAAAAAGAAGAAGATAACATTAAAGCAAGAACTGATAATTAA
Protein Sequence
MDVRNKFKEICRSCMKKEKAMKRIFNSEINSVPISQMLSFATLINVRPDDGLPSSICYICLNRLIGAYKFQQMCVDSDLLMRSELKDYYNKIKTKLTITQNILDELRSNVIDGIPSDSFDEDDDNKDIYEITSISQTSSISTDNNDNDNDNNKKQHLNNDHELLKIKKGSIKSTETLKKSSKKNIIDDKCTTNVQQSNDTDIIVKIEPDIDIEENIEQLQNDNNKNNNLDFMKKQHQENLNENKNKIKQEYDDKDEEILFTVMTKGDGIEDITTKLNQQQQQQQQQQRASVNLIRKSLPKSSSSSSFLSSNIQSSSSIITNNNCTSIPKISNAISLAPQSFQQQQQNCLSLPSSSSSSSTLQQQNRLSLPSSSKSTTIIDNLSKISSINKRSSNPNPFNSSNVISIPSKSIAKTKAYFKNNATTTTTQTKQIISNTKSTTVLNCNDEIDKDDEVKMKIVAYVCNVCKKVFTDKSYFITHKRMECPRLQNSISKDKEESNSVSVNSDDLNIRFIHKCILCRTMYKQKCDLEAHIYLKHKSKAYKIISRETQKIPEYRIIVSYIPVKRFIEQNRSRNQIYKIENFDHDIIYIDDDDNRTSVISKTATTTTTTTSLSSKSNPLTKNFIHQCNKCKKLFSNLSILNKHIMNDHKNIIFTKTNQLHDCNLCNKTFETLNDLKSHINEHQIKVSYGTDSKSANPSVNVSVNVHTINNSYTCQYCKVEFNSSNEIYEHLSQQKCRHFRTSIKSICNQIMTVNNSENDDDDDDNDIQYQRQQQKQQQQQQKPSTSKSQNRNSTTSVTGDIIDYIDLENLDNEFTDSIEINDDDDDDEVTQIVITKKNKPGENILKQRRLENAEIPHSRSYLNNSQHNNDDNNVYIENENDLLSENVARCSKNSKTKTFAENYQIFVENDKINSPYVCHICRKICYNFHTLKKHYQYHNQTTNKTKNLSFNRKQQQQSITDVSSISLPEIRPTKCENYDGEFVAIDDENDSFNIQKEKIEPDEEIPMEEDPINIEEDPIDISQEEKTIPNLYYTSNNNDKSSMDQTNQKKHQCDVCGLFLASYRGVFRHKDRWHGDKEPYFAFMCPQCGKGFRNNEALNRHTETQHTIKKEISIPETIKSEDRKFENPNLNETKTTIEKEVADINIKCKYCDRIINNRFNLRRHVRINHKENYEKYIMEQIQKQEKLIKKENEINLNCCVCGKQFETKELLSHHVEMHRQFIKERRHVSLNRKKRRNKGFRFVKKKKYATPRNNDMSLLVPLKNQDKTDNSAIDGRNSRTSIPSTSSSPSLFSLKNMKCPICCKSCTSMDMLKRHIRSVHIIKGHIRKQNLIMDNIETQGIQFECHICSSRFNSYANFVKHKKVNHGKENYVEEAWYQCETCKKRFLVKSNYEAHRKIHETNAINNLLTRFASLTSTAATTTATVNNDKKIDDEEESNGKESATPTNQGNENNEKDYPEFNEPHRCVICRKICSNRQSLSRHMRKMHLKYIREKVSKGSKIHQCHICTRIVTTPYKLKCHLRSHIPDEDELRNFEQSKQLENEQTPATTPIPTPKIQKQSQKSNIIGNIKTDKVEKYSNGRKKILTYPSYCKICKHPYSASHNTRRHIIAEHKIKSNEVSQFIGTRSIPIKAKTSQRIRCKICCKFFHNIKAYKNHLTLDDDNILSCKTVKFDLNNITIDKLIYSDTDNACKLCGNTFFKPADLKRHLIMKHRKIIEEYRAKEKENHEINSTIDTDSVADTVDTVDTVDMADEEEDNACKICGNTFFKPADLKRHLIMKHRKIIEEYRAKENQEINSTVDTADEEELEEGTLTSTSTRQPLNKRPRLTLNESVSLPVFICKICGRKFNKKVHLSGHQEYHNKGYVRKTKVGLICCKICNKYIKEKVTIYHFKFYHAFKDEIIQNGEFKKYLEIKKNMITVAEKRNAEQQGKQLNENDDDFDDDDGVINENLSTTNTIDLNVEQLLSIPLVPKRTRITRHSTFIEVKNEQEEEQLESNNEDNDDDDNDDDDDDDDDDVDDGENMSGGEQEKSLEKNNDKDDTNNLNDEENLNDIEQQSNNIIDDTSKNVPNIEKIIEQQVKKHLETKQNEKFEQKIEEEKQIVVNRIEKKSSEIVFNNLKPAAVVFDEKKLKIKDLDLLYNNCGNETRTIENRKTPIVIVEKLKTPIKKKIIKNNEKNYDYSEQKSNKNENVIDDKKSNNEKEKNLEQILMQEITINENDSDEKKLDDKKEQNSKENVTKNEKNFNCDEKEREEIELNEENNSLEIRNNTKLNDDNDNDDEQLKAKEIVNENQMNGKAIIDDSKITKNDNDENLMTEKEEDNIKARTDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-