Basic Information

Insect: Bombylius discolor
Gene Symbol: -
Assembly: GCA_939192785.1
Location: CALNDV010001419.1:6031-9076[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0058 0.33 11.5 0.8 1 23 217 240 217 240 0.94

2 11 0.0015 0.084 13.3 1.2 1 23 246 269 246 269 0.95

3 11 0.0021 0.12 12.9 1.5 1 23 276 299 276 299 0.98

4 11 0.00047 0.027 14.9 2.4 1 23 304 326 304 326 0.98

5 11 0.0056 0.32 11.5 0.3 2 23 333 354 332 354 0.93

6 11 2e-05 0.0011 19.2 4.1 1 23 360 382 360 382 0.98

7 11 8e-05 0.0046 17.3 0.9 1 23 387 408 387 408 0.97

8 11 0.0014 0.083 13.3 1.5 1 23 420 442 420 442 0.98

9 11 2.5e-05 0.0015 18.9 0.4 1 23 462 484 462 484 0.98

10 11 4.9e-06 0.00028 21.1 2.4 1 23 490 513 490 513 0.98

11 11 0.0034 0.19 12.2 2.5 1 23 519 541 519 541 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0058	0.33	11.5	0.8	1	23	217	240	217	240	0.94
2	11	0.0015	0.084	13.3	1.2	1	23	246	269	246	269	0.95
3	11	0.0021	0.12	12.9	1.5	1	23	276	299	276	299	0.98
4	11	0.00047	0.027	14.9	2.4	1	23	304	326	304	326	0.98
5	11	0.0056	0.32	11.5	0.3	2	23	333	354	332	354	0.93
6	11	2e-05	0.0011	19.2	4.1	1	23	360	382	360	382	0.98
7	11	8e-05	0.0046	17.3	0.9	1	23	387	408	387	408	0.97
8	11	0.0014	0.083	13.3	1.5	1	23	420	442	420	442	0.98
9	11	2.5e-05	0.0015	18.9	0.4	1	23	462	484	462	484	0.98
10	11	4.9e-06	0.00028	21.1	2.4	1	23	490	513	490	513	0.98
11	11	0.0034	0.19	12.2	2.5	1	23	519	541	519	541	0.97

Sequence Information

Coding Sequence: ATGAACAATTTGGAAATCATTCATCATCCAATGAAGTTTAAATTGGATGATACTTGTCGTACCTGTGGTGCGTTTGTCAGTGATGGAGTCTTGGTACCAATATTTGACCAAGTTGAAATCAGTACAGAAAATTCAGTTTTCCAAATATTTGAAGAGCTTGAATTGATGACTATCAAGATTGCAAAAGATGACAATTTACCTCAACAGATTTGCATTAATTGCATAAACGAACTGAAAAATATTCATTTATTTCGTGATAAATGTAAACTTGCTCAGAATGTACTGAGAGAGTATTTCATACAAAGTGTTGCCAAAACTGAAATCAACATCGATGATACAATTTCAGAGGAGCTTCAAATAATACCGGAAGTCTTGATAAAAGAAGAAAAATCTTTAGATGATGTCCTCAATGAAAACGGAATTATTACTGCTGCATTGGAAAATGATAAAGAATCAAATTTTGCAGAAGAATCAAATTTCGAAGAAAAATTAGAATTCTTAGATGACCTAATATCCGGAGAAGAAACTAATCCTGTTGATAAAGAAAATATAAATTTAAAGGTAGTTAAATGCGATAACTGTTTATATTTTGCATATAAGCCAGATGAAATATATCATGGAAATGGTTGTACTCCAATGCAAGATATATTTTCATGTTTTTATTGTTCGAAATCATATAAAGAAGAAAAAGAAGTTATAAATCATATTCTTGAAACACATTCACGAGATCGTCCATACTTGTGTCCAATTTGTAATGAACCATTCGATACAAGTCAAAATTGTATTAAACATTTAAAAAAATTACACAGCGATATTAAAAAAGCTTATGTTTGTGATATGTGTTCAGGAAATTTTGAAACTGCAACATTTCTTAGACGGCATAAACGGAAATATCATCCAACTGGAAATtatgaatgtgaaatatgtcatgaggaatttactaatatatacaaatttaaaattcacctttatagacacgataaaaataaaccactcaaatgtaaatattgtccaaaatcatttttagtacgacgtcttttacaagaccatgaagcaatacatactggtgaaagacgatatcgttgtaaggattgtgataaaagatttaaaaatacatcatcatattatcttcatagaagagagcataatagaaaaaatcattattgtgaaatttgtaacaaaGGTTTTTCAAGAGCAGCATTAAAAGCACACATGGAAAAACATAACAACAAAGAAGACTTAGAAGATGAAATTAAATATATATGTTCAGTTTGCAAAGAAAGTTATGCAACATCAATTTGTTTAGATAACCACCTTAAAAAACATAATCCTATTAGAAATTCTAATAAAGAAAAAACAGTGACTACTAAAATAATTCAAAAATATGATTGTTCTTTATGCGATGAAAAATTTTCTTCCTTATTAGGATTACAAAATCATATGAAAATGCATGATGAAAATCGAAAATATAAATGTGATATATGTAGTATAAGATATAAACGTAAAGAACATTTAACAGCACATATAAATTCGAAACATACAAAAACAAAAAATTATTTTTGTTCATTTTGCAAAAAAGTGTTTGTATCATCCACAGCGAGAAAATCTCATGAAAAAATGCATATGGAAGGTCATCAAGCAGAAAAGCATTCAGAAGAAGAACTAATGAAAGAAGGAGAAAAGATTCTAACTGAGAATTTAAAATCATGTACAAAGAAAAGTGACAATATTGAAGAGGAAATTATTAATGATGAAGAAATAAACGAGTAA
Protein Sequence: MNNLEIIHHPMKFKLDDTCRTCGAFVSDGVLVPIFDQVEISTENSVFQIFEELELMTIKIAKDDNLPQQICINCINELKNIHLFRDKCKLAQNVLREYFIQSVAKTEINIDDTISEELQIIPEVLIKEEKSLDDVLNENGIITAALENDKESNFAEESNFEEKLEFLDDLISGEETNPVDKENINLKVVKCDNCLYFAYKPDEIYHGNGCTPMQDIFSCFYCSKSYKEEKEVINHILETHSRDRPYLCPICNEPFDTSQNCIKHLKKLHSDIKKAYVCDMCSGNFETATFLRRHKRKYHPTGNYECEICHEEFTNIYKFKIHLYRHDKNKPLKCKYCPKSFLVRRLLQDHEAIHTGERRYRCKDCDKRFKNTSSYYLHRREHNRKNHYCEICNKGFSRAALKAHMEKHNNKEDLEDEIKYICSVCKESYATSICLDNHLKKHNPIRNSNKEKTVTTKIIQKYDCSLCDEKFSSLLGLQNHMKMHDENRKYKCDICSIRYKRKEHLTAHINSKHTKTKNYFCSFCKKVFVSSTARKSHEKMHMEGHQAEKHSEEELMKEGEKILTENLKSCTKKSDNIEEEIINDEEINE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00234236;
90% Identity: iTF_00234236;
80% Identity: iTF_00234236;