Basic Information

Gene Symbol
ncor1
Assembly
GCA_939192785.1
Location
CALNDV010000245.1:210225-219277[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.4e-08 6.2e-05 23.0 0.0 3 43 476 516 475 518 0.97

Sequence Information

Coding Sequence
ATGCTACCTGTCGATACGCCACAATCATACTCAAAAGGTGGAGTTGGACCACCATCGCAACAACAGCCAACATCTCGTTCAGCAGCTAGCCCATTATCACCGCCACGACCAGGTCCTGGTGCAGCAAATACCTATCCAAGATTTGCGGATGTTACGGCTGTACGTGAAGCACCTCATCGATATGTTCAACAAAGTGGAGCATATGGTGTTGGTCAAGTCAATCCATATGCAAGAATACCTCAGATGCCTGCCCAAGTTCAAGATTATCATAGGGCAGCAGCTGCAGCATCTGTTGTCGTATCGAGCAACAATAGTTTACCTATTGTATCAGTTGGATCCGCCAATACGATGGAATCGATGCCACCTCAAGGCCCTCCACCAACTGGTCCGCCATCATCCGGTCGACAAAGAATTTCGCTTATTCCACAGCCACAACATCCCAGTGAGTATATGTCGAGTGCTGGAAGACAACCAACTCAAGCACCTCCAGATCCAGGAGGACCACCATTTAAAAAATTACGCTTAGGTGAAACAAATCATTTGCCGCCCGTACAACAATTAAAAGTTGATACAAGAGAGCATAGGCCAGCAACAACAGAAGCTTATCATCCGCAAGTTGAGGCAATATCACCAACACTGCCGAATGATCCAGTTGAAGAAAGACAACGAACCGCTAAAGATGAGCTTCTTATGCAAATAAATAAGGTCGATTTAGAAATTGTAAATGTAGAGAATACATTAATGATACTAAAGAAAAAAGAGGAAACATTGGAAGAGGCGTCATCACGTCCCTTAAAAGTTGAAGAACCGGCAGAAGTTCAACCGAAACATCGTAATTTAGCACAAAAAATTTACGCTGATAATCGTAAACGGGCAGCAGAACAACATTCCGTTCTTGCACCATTAGGACCTAAACTAGAATTTCCACTTTACAATCAACCAGATGATATAGAGGCCCTTCAGCACATTATTGAACGACATCAGACATTTAAATCACGTCTGCTTTTACATTTGAAAAAAATAAAATCTGAACGGACAGCTCGTAATGCTGCATTAGTAGAAAAATACGCTCAACTTTCTCAGGAATGGTTGAAGCGTGTAGAAAAGGCTGAAGCTAGTGCAAAACGGAAAGCGAAAGAAGCGAAAAATCGTGAATTCTTCGAGAAAGTGTTCACAGAATTGCGAAAGCAACGTGAAGATAAAGAACGTTTTAATAGAGTAGGATCAAGAATTAAGTCAGAAGCAGATCTTGAAGAAATTATGGACGGTTTACAAGAGCAAGCGATGGAAGATAAAAAGATGCGCTCTTATGCTGTGATACCACCGTTAATGTTAGATACAAGGCAGCGGCGATATACCTTTAGTAACGAGAATGGTTTTCTGCCCGATATGGCTCTAGATTATAAAGAAAGACAGAACCTGAATGTATGGACGGCTGGTGAAAAAGAAATTTTCAAAGAGAAATTTTTACAACACCCGAAAAATTTTGGTGCCATTGCGGCTAGTTTAGACCGTAAATCGGCACAAGACTGTGTTCGTTATTACTACCTCAGTAAAAAGACGGAAAATTACAAGCAATTGCTGCGTAAATCGAGGCAAAGAACACGCAGCTCTCGTAATCCGCAAAAATCTCAACAAGCGCAAACCCAATGCATTGTAGATTcactaacgactggtgtaacgacacgattgcaaagggagcaacagcaaaagactggcgggcgtgaacgtGCCGCACAATcagcatcagctggtacatcagctgtagcttcagcatcagcggcggcaggtactgtcacgacaacaacaacaactgcaacaacaatgccggcaacaacaacaacaactacgacgacaatatcaacatcagaaagtggtaccacattgtcgtcaacaacaaccgttagttcttcaaattcaaatgaaacttcaacaatttcaacgatagttgtgacatcaaccacaaatacaataagtagtaccacatcaacatcaacagtggcaacggtagcGAACTCAACTACTGATGGTGTCCTAGAACAGGATTCATCATTAGAGAAAATAAATGGAATTCAAAATGGTGGTGTAAGCATAGATTCAATACCAAATGTTGTGATGacagcaaccagtagtagtagtagtagtagtggtagcagtggtacaacaaatggtggtacaacaacagctggtccatctattgcatcagataattcatcgacgaataataacatttctggagtaacttcattagcaacggctgtgcacaattcagaaccgattctcagcgatgaatcagcaacgacgacaactagtagtaaagaacgcgcaagtccttcttcggcagcaacatctgttatcaatgtgaatagtagcagtagtagtagtaatagtaacagtagcagcaacaacaataataacaacagcaacaataacaataatagcaacaataataataataataattcaatggtgaacgcgaacacaaatgaaattcatcctcCTTCATCAACAAACATAATAAATGCGTCTTCTGTACCTTGTACGACATCAATAACATCAACAAATACACCGAATGGTATAAAAGTTGAATTGATGTCTGTGGTAAATGAAAATAAATCACATGAAATGAATGATAAGGAATCAAAGGATGCTCATGGGGATGATAAAATGAATTTAAATAGTATTGGAGGAGGGATTAAACAACAAAATAAAACAGAAATTGTTGACGGAAATGACAGTTCAAATGTTAGTGACATGAAAAAGATTCGTCTTGACTCAGATACATCATCATCGAATCCTGCCATTTTAGCCAATGATATGGCTGACAGTAATGTTGCCGAGAATAAAGCATCATCATCAGCATCATCAACAGTAGCGAAAAGTTAA
Protein Sequence
MLPVDTPQSYSKGGVGPPSQQQPTSRSAASPLSPPRPGPGAANTYPRFADVTAVREAPHRYVQQSGAYGVGQVNPYARIPQMPAQVQDYHRAAAAASVVVSSNNSLPIVSVGSANTMESMPPQGPPPTGPPSSGRQRISLIPQPQHPSEYMSSAGRQPTQAPPDPGGPPFKKLRLGETNHLPPVQQLKVDTREHRPATTEAYHPQVEAISPTLPNDPVEERQRTAKDELLMQINKVDLEIVNVENTLMILKKKEETLEEASSRPLKVEEPAEVQPKHRNLAQKIYADNRKRAAEQHSVLAPLGPKLEFPLYNQPDDIEALQHIIERHQTFKSRLLLHLKKIKSERTARNAALVEKYAQLSQEWLKRVEKAEASAKRKAKEAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQAMEDKKMRSYAVIPPLMLDTRQRRYTFSNENGFLPDMALDYKERQNLNVWTAGEKEIFKEKFLQHPKNFGAIAASLDRKSAQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPQKSQQAQTQCIVDSLTTGVTTRLQREQQQKTGGRERAAQSASAGTSAVASASAAAGTVTTTTTTATTMPATTTTTTTTISTSESGTTLSSTTTVSSSNSNETSTISTIVVTSTTNTISSTTSTSTVATVANSTTDGVLEQDSSLEKINGIQNGGVSIDSIPNVVMTATSSSSSSSGSSGTTNGGTTTAGPSIASDNSSTNNNISGVTSLATAVHNSEPILSDESATTTTSSKERASPSSAATSVINVNSSSSSSNSNSSSNNNNNNSNNNNNSNNNNNNNSMVNANTNEIHPPSSTNIINASSVPCTTSITSTNTPNGIKVELMSVVNENKSHEMNDKESKDAHGDDKMNLNSIGGGIKQQNKTEIVDGNDSSNVSDMKKIRLDSDTSSSNPAILANDMADSNVAENKASSSASSTVAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00234744;
90% Identity
iTF_00234744;
80% Identity
-