Basic Information

Gene Symbol
Iswi
Assembly
GCA_939192785.1
Location
CALNDV010000690.1:287529-291253[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-06 0.0039 17.2 0.0 3 41 813 852 812 852 0.96
2 2 0.07 68 3.7 0.0 3 21 915 934 913 939 0.90

Sequence Information

Coding Sequence
ATGTCGACAGCTGAGGAAGAGAATAATAAAGTCGATGTAGTGATGGAGGAGCCACCACCAGCGAATGAAAATTCGAATGAATCAACAACTTCAGATACAACATCTTCACGTGAAAAAGAAGTCGAATTCGATACAAAAATTGAAACGGATCGTAGTAAACGTTTTGATTATTTATTAAAACAAACTGAAATTTTTACACATTTTGTTAGTGGTACAGCTGGTCCAAAAAGCCCATTGAAAACAAAAGTTGGTAGACCAAGTAAAAAACCAAAGGAAACTCTAGCTGAAACTACTAGTGCTGCTGATCATCGTCATCGTAAAACCGAACAGGAAGAAGATGAAGAACTTCTTGCGGAAGAGACATCATCATCAAAAAGTGTATTTCGTTTTGAATCATCACCTTCATACATTAAAAATggtgaattacgtgattatcaaattcgtggtttaaattggatgatttcattatatgaaaatggaattaatggtattcttgccgatgagatgggtctcggaaagactctacaaacaatttcacttttgggttaTTTAAAACATTTTAGAAATAATGCTGGACCACATATTGTTGTTGTACCAAAATCAACTTTACAAAATTGGATAAATGAATTTAATAAATGGTGTCCATCAATTAAAGCAGTTTGTTTGATTGGTGATCAAGAAGCACGTAATCAATTTATTCGTGAAGTTTTAATGCCTGGTGATTGGGATGTTTGTGTTACATCATATGAAATGTGTATACGTGAAAAATCAGTATTTAAAAAATTCAATTGGCGTTATTTGGTTATTGATGAAGCACATCGTATTAAAAATGAAAAATCAAAATTGTCAGAAATTTTACGTGAATTTAAAACAGCAAATCGTCTATTAATTACTGGAACACCATTACAAAATAATTTGCATGAATTATGGTCATTGTTGAATTTCCTTTTACCAGATGTTTTTAATAGTGCTGAAGATTTTGATTCATGGTTTAATACAAATTCATGTTTAGGTGATGATGCATTAATTAAACGTCTTCATGCTGTACTTAAACCATTCCTTTTACGACGTTTAAAATCTGAAGTAGAGAAACGTTTAAAACCGAAAAATGAAATGAAAATATTTGTTGGATTATCAAAAATGCAAAGAGAATGGTATACAAAAGTTTTAATGAAAGATATTGATGTTGTTAATGGTGCAGGAAAAGTTGAAAAaatgcgtttacaaaacattcttatgcaattaagaaaatgtacaaatcatccatatttatttgatggtgcagaaccaggtccaccatatacaactgatgaacatttggtatttaattctggaaaaatggcaattttagataaattattacccaaattacaagttcaaggatcgagagtattgattttcagtcaaatgacacgaatgttagacattctagaggattattgtttatggagaggttatcagtattgtagattagatggtcagacaccgcatgaggatcgtgatcgtcaaattcaagaatataatgctgacaatagtcaaaaatttgtttttatgttatcaacaagagctggtggtttgggtattaatttagcaactgctgatgttgtcatcatttatgattcagattggaatcctcaaatggatttacaagcaatggatcgtgcacatcgtatcggtcaaaagaaacaagtacgagtttttcgttttatcactgagaatacagttgaagagaaaattgttgaaagagctgaaattaaattgagacttgataaagtggttattcaacaaggACGTTTGGTTGATAGTCGTGCAGCTCAATTGAATAAAGATGAAATGTTGAATATTATTCGTTTTGGTGCAAATCATGTATTTGCATCGAAAGATTCTGAATTAAGTGAAGAAGATATTGATACAATTTTAGAGCGTGGTGAAGCAAAAACAATGCAACAAAAAGCTAAATTAGATGAACTAGGTGAAAGTTCATTAAGAAATTTCACATTGGATAGTGCTCCTGAAGGTACTAATACATCAGTTTATCAATTTGAAGGTGAAGATTACAGAGAAAAGCATAAATTAAATGCAATGGGTGGTTGGATTGAACCACCAAAAAGAGAAAGAAAAGCAAATTATGCTGTCGATGCATATTTTCGTGAAGCATTAAGAGTTTCTGAACCTAAAGCACCAAAAGCACCACGTCCTCCAAAACAACCAATTGTACAAGATTTTCAATTTTTTCCTCCACGTTTATTTGAATTACTTGATCAAGAAATATATTTTTATCGTAAAACATTAAATTATAAAGTACCAAAAAATCCAGAATTAGGATCTGAAGCAGCAAAGGTACAACGTGAAGAACAAAAAAAAATTGATGAAGCAGAACCATTAAATGAAGATGAAATTTCAGAAAAGGAAGCACTATTGACACAAGGTTTTACAAATTGGACAAAACGTGATTTCAATCAATTTATCAAAGCTAATGAGAAATATGGAAGAGATGATATTGAAAATATTGCAAAAGATGTTGAAGGTAAAACACCTGAAGAAGTTATCGAATATAGTACAGTATTTTGGGAAAGATGTCATGAGCTTCAAGATATTGAAAGAATTATGGCACAAATTGAACGTGGTGAAGCAAAAATACAACGAAGGTTATCTATTAAAAAAGCTCTTGATCAAAAGATGTCACGCTATCGTGCACCATTCCACCAACTAAGAATACAATATGGAAATAATAAAGGCAAGAATTACACAGAAGTTGAAGATCGTTTTCTAGTTTGCATGCTTCATAAGCTAGGATTTGATAAAGAGAATGTTTATGAAGAGCTTAGATCTGCTATAAGAGCATCACCACAATTTCGTTTTGATTGGTTCTTAAAATCACGTACAGCTCTAGAATTGCAACGTCGTTGTAATACATTAATTACATTAATTGAACGTGAAAATCAAGAATTAGAAGAGAAAGAAAGACAAGAAAAGAAAAAGAAAGCAAATAAAAGTGGTACTGGTATATTAACAAATTCTGGACAATCAAAAGCTGGTCAAAAAAGAAAGTCTGAAATTATGAATAATGATAAAAATAAAAAGAAGAAGAAATAA
Protein Sequence
MSTAEEENNKVDVVMEEPPPANENSNESTTSDTTSSREKEVEFDTKIETDRSKRFDYLLKQTEIFTHFVSGTAGPKSPLKTKVGRPSKKPKETLAETTSAADHRHRKTEQEEDEELLAEETSSSKSVFRFESSPSYIKNGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFRNNAGPHIVVVPKSTLQNWINEFNKWCPSIKAVCLIGDQEARNQFIREVLMPGDWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWSLLNFLLPDVFNSAEDFDSWFNTNSCLGDDALIKRLHAVLKPFLLRRLKSEVEKRLKPKNEMKIFVGLSKMQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEPGPPYTTDEHLVFNSGKMAILDKLLPKLQVQGSRVLIFSQMTRMLDILEDYCLWRGYQYCRLDGQTPHEDRDRQIQEYNADNSQKFVFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRFITENTVEEKIVERAEIKLRLDKVVIQQGRLVDSRAAQLNKDEMLNIIRFGANHVFASKDSELSEEDIDTILERGEAKTMQQKAKLDELGESSLRNFTLDSAPEGTNTSVYQFEGEDYREKHKLNAMGGWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYFYRKTLNYKVPKNPELGSEAAKVQREEQKKIDEAEPLNEDEISEKEALLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKDVEGKTPEEVIEYSTVFWERCHELQDIERIMAQIERGEAKIQRRLSIKKALDQKMSRYRAPFHQLRIQYGNNKGKNYTEVEDRFLVCMLHKLGFDKENVYEELRSAIRASPQFRFDWFLKSRTALELQRRCNTLITLIERENQELEEKERQEKKKKANKSGTGILTNSGQSKAGQKRKSEIMNNDKNKKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01549516;
90% Identity
iTF_00424599;
80% Identity
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