Basic Information

Gene Symbol
Dnajc1_1
Assembly
GCA_939192785.1
Location
CALNDV010001549.1:14081-16063[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.1e-07 0.00088 19.3 0.0 4 38 302 339 299 340 0.89
2 2 1.3e-10 1.2e-07 31.6 0.2 3 44 391 437 389 439 0.90

Sequence Information

Coding Sequence
ATGAAAATTAAATTTCCGTGTTTATTAATTTTATTTTATTTAATTTATAATGTAGAATCATGGAATACCGATGAATTAGAAATATTCGATTTGGTCGAAGAAGTTAATCAAAATTTTTATGAATACATGGGAGTTGGTCAGGATGCAACTATTCAACAGCTTAAAAGAGCATTTAGAAATTTATCGATTGTTTTACATCCAGACAAGAATCCATCAGAGGATGCAAATATCAAATTTAGAAATTTAGTTGCAATTTATGATGTATTAAAAGATCCATCAAAACGTGAAAAATATGATAAAGTTCTTAAAGATGGATTACCTAATTGGAAATCAGCTTTATATTATTATCGTCGTGTTAAAAAAATGGGTCTTGCAGAAATGACTATTATTCTATTCATAATTATTACAATTGGACAATACTTTACAGCATGGGCAATTTATTTAGAAAGAAAATACACAGCGGAACAAATATTTGGATCAAAGAAAAAACGTAAAAATAAAGCTAACGTTGATATTGATGCAATTATAAGTGAAATTCCAGTACCAAGCATTTACAATACACTTCCTTGTCAAATACCTAAAGCCATTTGGAATATTCCAATGCTAATTGGTTCTGCTTTTAAAACCATAAATGAAATAAAAGAAAAGGAATTAGAGAAACGTAGACTTGAAGCAGAAGAAGCAGAAAGACAAAGATTACGTGAAGAGGAAATAGCAAAAGAGAAGGAAGCAAAAAAAGAATTGAAGGAAACAATTCGTAAAAGAAAACAAGCCGCAGTTGCTCCGGAAAAAACTGATGAAGAATTAGCTGGTTATTCAGTTTTAAAGGTTAAAGAATTTACGGAAGATGATGCAGTGAAACCTGTAAAAAATACAAAAGCATCTCAACTAAGTGGTGGTTTCTGGACTGATGAAGATTTAGTTGAATTAGTTCGTTTGGTAAAAAAATATCCTGGCGGTACTTCAAATAGATGGGAAATAATTGCTGAAACAATGGGAAGAAGTGTAACAGAAGTTACATTTATGGCAGCAAAATTAAAAGAGAATGGTTATAGAATTCCGGGTCATGCAACTGAGAGTGTTGCAGAAAATATTATGCAAGAAGCAACTGAAATTCGAAAAGTTAAAGAGAAAACAAAAAAAGCCCAACCAGTTTTAGTTCCTGAAACAAATTGGTCTCAAGAACAACAACGAGCATTAGAAGCTGCAATTGTAAAATATAAAAAATCGGCAAATACTGATCGATGGCAAAAGATTGCTAATAGTGTACCAGGAAAGACAAAAGAAGAATGCTTATTACGATATAAGTATTTGGTAGAATTAGTAAAGTCTCAAAAAGAAAACGAAACAAAACAGGCAAATGAAGAAATAGATAATAAAAATGATGAAATAAAGTTAAATGAAGAAACATCTGGAATTGAGATATGTCCTGTGGAATCAACAGAGGAACAGAAAAAGGAAAATATTGAAGAAGAAGTGGAAATAGAAGAAGACATACCAGCATCAATTAAAAAGCAAGGTAAGCCACGAAATAAACGAAAAGAAAGAAAGAAAAGACAGGAATTTTCAGATGACGATGATTATTCAGAATAA
Protein Sequence
MKIKFPCLLILFYLIYNVESWNTDELEIFDLVEEVNQNFYEYMGVGQDATIQQLKRAFRNLSIVLHPDKNPSEDANIKFRNLVAIYDVLKDPSKREKYDKVLKDGLPNWKSALYYYRRVKKMGLAEMTIILFIIITIGQYFTAWAIYLERKYTAEQIFGSKKKRKNKANVDIDAIISEIPVPSIYNTLPCQIPKAIWNIPMLIGSAFKTINEIKEKELEKRRLEAEEAERQRLREEEIAKEKEAKKELKETIRKRKQAAVAPEKTDEELAGYSVLKVKEFTEDDAVKPVKNTKASQLSGGFWTDEDLVELVRLVKKYPGGTSNRWEIIAETMGRSVTEVTFMAAKLKENGYRIPGHATESVAENIMQEATEIRKVKEKTKKAQPVLVPETNWSQEQQRALEAAIVKYKKSANTDRWQKIANSVPGKTKEECLLRYKYLVELVKSQKENETKQANEEIDNKNDEIKLNEETSGIEICPVESTEEQKKENIEEEVEIEEDIPASIKKQGKPRNKRKERKKRQEFSDDDDYSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00234734;
90% Identity
iTF_00234734;
80% Identity
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