Bdis012663.1
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- -
- Assembly
- GCA_939192785.1
- Location
- CALNDV010001239.1:4043-8647[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-10 2.2e-07 30.4 0.0 10 38 19 47 17 52 0.84
Sequence Information
- Coding Sequence
- ATGCTTAGTATAAGATTATCATCAAGATATATCGACCTGAAGAAATTGGGCATTAGACGCATAAGAGATGAAAAAACGTCCATTCGTCAAGCGAGTAGAATTTTTGACATTCCCAGAAGCACATTGCAAGATAAATTATCTGGGAAAATTCCACAAAATATTTCTAAATGTGGCCCTCGAACAGTATTAACTTCAGCCGAAGAAGACAAAATTATGCAATGGTGCATTAATCTGACTAAGTGTGGTTTCCCTGTTAAAAGAGAAAACCTTTTGGATATTGTCCAAAAAATAGTCATTGATGATGGAAGAAACACACCATTTGTGAATGGCAGGCCAAGCCAAAAATGGTTTAAGGTGAAAAATAGGAAGAATGTTGGTACTAAAAAGTGTGCCAATGGTGGTAAAATTAGTGCTGAAAAATGTACTAATGGTGTGAATAATGTTGGTACTGAAAAATGTACCAATGGTGCTGAAGATAGTACTGCAAAACGTACTACTCGTTCAAAAGTTAGTACTGAAAGAAGTACTAATAAAGCAACGGCTAGTACTGCAAAACGTACTACTCGTTCAAAAGTTAGTACTGAAAGAAGTACTAATACAGCAACGGCTGGTACTGCAAAACGTACTACTCGTTCAAAAGTTAGTACTGAAAGAAGTACTAATAAAGCAAAGGCTGGTACTGAGACATGTACGTTAGAGTCTGCTACCGAAAAACATGAATATAGTTATTGGCTTCAACAGCATGACATAGCTGATATTGCAAGAATTGAATATGACTATGGCACTGATGAAGCTAATACATTGTTCGAAGTGGTAGGATCACTTCAACATATTAATAATCAATTGCTACAGTTTAAGAATAACATAGCACGAAGAGATGAAAAATGGCCATTGACTTTTATTGTTAATTTAAATAATAGTCATTGGATTACGTTAGTCATCTCTTGTCAAAATGGGCAATATGACGGATACTATGTGGACTCGTTAGGTAATAATGTTCCACATGATATTCGTGAACTCTTGCAAAAGGCTAATGTTAGCATTAATGATGTTTCTATTGCTCAGCAAAAAGATGGTCACAATTGTGGCTTATGGGCATTAGAAAATGCTAGAGATATTAATGCTGTATTGCAAGAAGGTAGAAATAATATTCCTACTGACATACGTGATCGTTTACAAATTCGTAACAGAGATAACGATTATTTTATACGTATGAGAAAAGATGTTTCACAAAGATTAAGTATAGATTTACAAAGGTCGATTAACCTAGAACCTATACTTGCTGAAACACAACTTCTTGCCGGTACTGAAATATGTACAAATACAATAGCTGGTACTGCAAAAAGTACTGCTCGTTCAAAGAATAGTACTGGAAAACGTTCAAAGAATAGTACTGGAAAACGTTCAAAGAATATTACTGAAAAACGTAAGAAAGAACGTAAAAGAAGAAGTCCTATTAGAGCGAATGGAGACATGGAAACCATAACTATTAAATGTGGGTTTCGAAAATTTGTCAAAGATTTTGGTAGGTTTTCTGAAGAAGAAATTGATGTAATCAGAACAGCGAGGGCAATAGAAGAGTTGCCTACTCCAGATTTGATTTACAACAACATACAAGATACCGTACACCTCGTATCAAATCTGATGATCGAGGTTTCGAATTCTTTGTACTATGTTGTAAATGAACAGCCAGTATTGGAAGCACAAATCCCAGAATCTGTTACTGGAGAAGAAAAAAGACTAATGAAAAGAGTAGCAAATGATAATGTTTCTGAAATAATGAAACGCCTCTTTGAGGGTAGCGCTAATGTCCTGAATGAGTTTGGGCGTAAAGATATGACATTCAAGTCTTTCTCAACGAACGATGTAGATGTCTCGATATTGTTCGAACGTCCAAAGAGGCAAGACCTTGAATGTAGTGAAGCCCGTGCAATGCAATTAAAAAAAGCTGAAAAAACGCTTAAAGATAAAAGGTATTCCAAAACAGTTGGAATAGACCCTGGCCTAAAATGTTTATTCGGTATGGATTCTGTTTGA
- Protein Sequence
- MLSIRLSSRYIDLKKLGIRRIRDEKTSIRQASRIFDIPRSTLQDKLSGKIPQNISKCGPRTVLTSAEEDKIMQWCINLTKCGFPVKRENLLDIVQKIVIDDGRNTPFVNGRPSQKWFKVKNRKNVGTKKCANGGKISAEKCTNGVNNVGTEKCTNGAEDSTAKRTTRSKVSTERSTNKATASTAKRTTRSKVSTERSTNTATAGTAKRTTRSKVSTERSTNKAKAGTETCTLESATEKHEYSYWLQQHDIADIARIEYDYGTDEANTLFEVVGSLQHINNQLLQFKNNIARRDEKWPLTFIVNLNNSHWITLVISCQNGQYDGYYVDSLGNNVPHDIRELLQKANVSINDVSIAQQKDGHNCGLWALENARDINAVLQEGRNNIPTDIRDRLQIRNRDNDYFIRMRKDVSQRLSIDLQRSINLEPILAETQLLAGTEICTNTIAGTAKSTARSKNSTGKRSKNSTGKRSKNITEKRKKERKRRSPIRANGDMETITIKCGFRKFVKDFGRFSEEEIDVIRTARAIEELPTPDLIYNNIQDTVHLVSNLMIEVSNSLYYVVNEQPVLEAQIPESVTGEEKRLMKRVANDNVSEIMKRLFEGSANVLNEFGRKDMTFKSFSTNDVDVSILFERPKRQDLECSEARAMQLKKAEKTLKDKRYSKTVGIDPGLKCLFGMDSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -