Bdis003103.1
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- ttk
- Assembly
- GCA_939192785.1
- Location
- CALNDV010000173.1:237628-245239[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-17 2.8e-14 52.5 0.0 2 45 504 548 503 548 0.95
Sequence Information
- Coding Sequence
- ATGTCAGTACaacagttttgtttacggtggaacaatcaccaaccaaattttatatctgtttgttcttcccttttgcataacggtactttagtagatgttacattagctgcagaaggaaggcaactacaagcacacaaaatcgtattgtccgcgtgtagttcttattttcagacactttttacatcaaacccatgtcaacatcctattgtcatattaaaagatgttcagtataatgatctgaaaacaatggttgatttcatgtattacggagaagtaaacgtatcacaggaacaactaccacacatattaaaaacagcagaaatgttaaaaattaaaGGCTTAGCTGAAATGCCAGACGCAGCTGCATCATTTACAAAATCTGATAGTAAATCATCATCAGAACAAATTGAACAGCATCAGGTTGCAAGCAGTGGTGGTTCTGATTCTATCTGGGGTAGTACAGAATCACAAATTCAACATCATCCATCACATCAACAGTCCCAAACGCATTCTCAGCAGCAAAGAAGGACACCTTCACCTCAAGTAAATGCAACTTCTCCAGCTGCTAGAAGAAAAAGATTAAGAAAATCATCTAATAGTGGTTCAGGTGAACGTATCTCAGAAGAACAGAGTAGTATAGATGCAAACACTTCAACTATTAATGTATCACATATGGGTCAAATGTCATTTAGTACTGACACAAATTTAAGTTCAACAATTAATTTAAAAGTAACTAAAGAAAATTCAAACATCGATACAGAAATTCATCCACAAGATTCTTCTCAAGAAAGTAGTGAAGATACATCAAATCAACAGCACCACGTGCAACAAATTAAACCTGAAGCAGATATTTCAAGCGTTTCACAAGCGATTCCACTTGATACATCTGGACCTGCTACGCCATCAGAACACGATACTCCAAATATTTCTCAGTCACAGTCATCACATTCTGGTGTACAATGGACGGTTGTGGACTCAAGTTATCCTCGATTTTCATTGTCATCTTGCCAAGGTAATATATCTATTGGTGGTGAAAATAGTCAAACGaacaatgacggtaataatgtcacaaataatcaacatgtacaaccaaatgtaaacacttctttaagcgattcatctgtagtaacaacaaatcaacaggatcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacagcagcagcagcaacaacaacaacaacagcagagtcatatacaaatgaattatcaaacatcttatacacctcaaataatatcagtgaataatCTTGTTAGTAATTATTCTCAAAATCTTTCTACTCCAACTTCACCATCTGATTCAGGAATGGTACAATCAGTTTATAGTCAAGGACCTTCACCAACTCAATCTCCAGTTCATCAAATTACAGTTACATCAAATATTTCTAATGCAACAACGAATAATAATTCAAATCAATCATCATCATCATCTGCAGTTCCAATTAAACGTAAACGTTCAATTAATCCACAAGGTGATGAAAATTTTAAAATGGCATTAGAAGCTGTACGTACTGGTGGTATTGGATTTTGTAAAGCTGCACGTTTATATGGAGTAAATAATAGAACATTATGGTTAGAATATAAAAAACGTGGTTATCCAATTAGTAGGCCTAGTATTAAAAGTCGTATTAAACTTGAACCCAATACATCACCTCCACCATCTCAGAAAAAAGATGTTAATATAGATGATTATGATAATATTAATCAACAAACAATAAATATGCAAGTTCCTCCAACATCTGAAACACCAACACCAATAATGTGTGCACCACATGCACATCCAATGGGTGTTATGAGCTTTCTAGATACTAGACATATAGAATTTCCAACTGGAATTCATACAATGCCAAGACAACGGTATGCAGATAGTTCAGTTAACGTTAATACAACAACAATGAATTTGCAAAGTTTAAATTTTAATTCAATGTAA
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTSNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAAASFTKSDSKSSSEQIEQHQVASSGGSDSIWGSTESQIQHHPSHQQSQTHSQQQRRTPSPQVNATSPAARRKRLRKSSNSGSGERISEEQSSIDANTSTINVSHMGQMSFSTDTNLSSTINLKVTKENSNIDTEIHPQDSSQESSEDTSNQQHHVQQIKPEADISSVSQAIPLDTSGPATPSEHDTPNISQSQSSHSGVQWTVVDSSYPRFSLSSCQGNISIGGENSQTNNDGNNVTNNQHVQPNVNTSLSDSSVVTTNQQDQQQQQQQQQQQQQQQQQQQQQQQQQQSHIQMNYQTSYTPQIISVNNLVSNYSQNLSTPTSPSDSGMVQSVYSQGPSPTQSPVHQITVTSNISNATTNNNSNQSSSSSAVPIKRKRSINPQGDENFKMALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRIKLEPNTSPPPSQKKDVNIDDYDNINQQTINMQVPPTSETPTPIMCAPHAHPMGVMSFLDTRHIEFPTGIHTMPRQRYADSSVNVNTTTMNLQSLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234069; iTF_00234699; iTF_00235014;
- 90% Identity
- iTF_00234069; iTF_00234699; iTF_00235014;
- 80% Identity
- iTF_00234069;