Bdis004603.1
Basic Information
- Insect
- Bombylius discolor
- Gene Symbol
- lolal
- Assembly
- GCA_939192785.1
- Location
- CALNDV010000292.1:314215-338010[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-09 1.7e-06 27.6 0.0 4 38 496 531 493 536 0.88 2 4 1.3e-13 1.1e-10 41.0 0.2 2 39 548 585 547 588 0.94 3 4 9.3e-18 8.1e-15 54.2 0.0 1 45 602 647 602 647 0.98 4 4 5.3e-18 4.6e-15 55.0 0.0 1 43 654 697 654 698 0.96
Sequence Information
- Coding Sequence
- ATGGCAGTTAGAAGCCATCAGTATTTTAGTCTCAGGTGGAATAACTACCAGAGCACTATGACATCAGTTTTTCAGCAACTAAGAGAAGATCAATCATTCGTTGATGTTACATTATCATGTGAAAATGGTTCACTAAAAGCACATAAGGTTGTACTATCAGCTTGTTCTTCATATTTTCAAAAACTGTTGCTAGAAAATCCATGTAAACATCCAACAATAATTTTACCATCCGATATCATTTTTAGCGATTTAAAAACAATTATTGATTTCGTTTATCGTGGTGAAATTGATGTTACTGAATCAGAACTTCAGGGTCTTTTGCGAACAGCTGAACAACTTAAAATCAAAGGCTTATGTGAAACAGCAGAAACAGTTGATGATATTACAACAGAAATATCAGCAACAGCAATAACAGTGCCCGAATCAACAACAATACCATTATCAAATATAACAAATGTAAGTCATTCTTTAGCACAGAATAGTCTACAACGTAAAACACGAGCTAGAAAAAGATCAAAATCACCTGATAATAATTGTAATACATCAATTATTAATAATACAAATCATAATTTCAATCCTGGTACGGTTGTTAATATAAATCTGAGTTCATCAATACCATCATCATCAACAATTTCAACTTCAACATCAACATCAACACATTTCAAAACGGAACCTCAAGATCAACTAGGCCATCAAGTTGTTAATAATATTACCAGTGATAATTCAGCAAGTAAACCTAAAATCTGTAAAACAGAAGAAACAGTAAATAATGAAGGAGTTGTAGCACCAAGTGCTGCCATTGTAACCCAAATTGTTGTTGCACGTGATAACAAAGATAAAAATATGACCAGCTTAGGAATGGGAGTGAATGGTGGTCTTTTAGGGGTTCCAATGGGCTTTTTAGATTTTGCTCCGGAACCACCAGCACCTTCAGCAACACCAGTTACTGAACATGTTGATATGGCGTGTACTCCGAGTACAGATACTAGAGACTTATCAAATCCCACCGAAACACTTGACATTGACAATCAAATTGCTCAACATATTATTCAACGACTTGATCAATCACCAATGCATCAGATACAACATCAAACTTCTGTGGATGATAATAAATTAAATATCATTCAAAATATAAAAACTGAAATAGTCGATACAAAACATCAGCATCTTCATCATCAGCAACAGTTACATAGTCATCAACAAGGACAATCACATCAATCACATAATCAAGATATAACTGGCACAACAGTAATGGAAATTGATACAAGTCATATAAAACATGAACCTGGAATGATAATTACACCAGAAATTGTCACAATGATGACTACAGGACATATGGATATATACAACTCGGATACAAGTGAAGATTCTTTAATGATTACTAATGGTTCTCCACATGATAATAGTGAACCACATTATACTAATTTAGATCAACCAAATGATGACAAAAATCAAACAAATGGACCGAAAACATGGACACAACATGATATGGTCTCTGCTTTAGATGCTTTGAAAAATCATAGAATGAGCCTAACAAAGGCATCTATCACATATGGTATACCATCTACAACACTTTGGCAGCGTGCACATCGAATGGGAATTGATACACCAAAAAAAGAAGGAACTGCAAAATCATGGAATGAAGAAGCTTTAAATAGTGCACTTGAAGCACTTCGAACAGGGCAAATATCAGCAAATAAAGCATCAAAAGCTTATGGTATTCCGTCCTCTACTTTATATAAAATTGCCAGACGCGAAGGTATAAGATTGGCAGCACCTTTTAATGCTGCACCAACAACTTGGACACCAGAAGATCTTGAACGTGCTTTAGAAGCAATTCGCGCAGGTCATACGTCCGTCCAGAAAGCAAGTACTGAATTTGGCATTCCCACAGGAACATTGTATGGCCGTTGTAAAAGAGAAGGTATTGAACTTTCTCGATCAAATCCTACACCTTGGTCTGAAGACGCCATGAATGAAGCTTTAGTAGCAGTAAGAGTTGGACACATGTCCATAAATCAAGCGGCAATCCATTATAATTTACCATACAGTTCACTTTATGGAAGGTTCAAACGTGGTAAATATGACACAGTAGCAACAAGTACAACAGCAAATACGTCTTCATCGAATGTTAACAATAGTATCGAAATCATAGATCATAGTCCAGATAATTCGTTTCAGTACAGTCCAAGTGCATCTAATTTACAAACACATCAGCAACAACAACAAACTCATCAACAAATTCATATTCAGCAACAATCTCAACAACATCATCAGCAACATTTACAACAACAAGATATTATAACACCTTCAAGTCAAGTTCATAGCCAGACAGGTGGTCAAATTCAACAAATTTATCACAGTAATCCGGAGAGAAGTTGA
- Protein Sequence
- MAVRSHQYFSLRWNNYQSTMTSVFQQLREDQSFVDVTLSCENGSLKAHKVVLSACSSYFQKLLLENPCKHPTIILPSDIIFSDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAETVDDITTEISATAITVPESTTIPLSNITNVSHSLAQNSLQRKTRARKRSKSPDNNCNTSIINNTNHNFNPGTVVNINLSSSIPSSSTISTSTSTSTHFKTEPQDQLGHQVVNNITSDNSASKPKICKTEETVNNEGVVAPSAAIVTQIVVARDNKDKNMTSLGMGVNGGLLGVPMGFLDFAPEPPAPSATPVTEHVDMACTPSTDTRDLSNPTETLDIDNQIAQHIIQRLDQSPMHQIQHQTSVDDNKLNIIQNIKTEIVDTKHQHLHHQQQLHSHQQGQSHQSHNQDITGTTVMEIDTSHIKHEPGMIITPEIVTMMTTGHMDIYNSDTSEDSLMITNGSPHDNSEPHYTNLDQPNDDKNQTNGPKTWTQHDMVSALDALKNHRMSLTKASITYGIPSTTLWQRAHRMGIDTPKKEGTAKSWNEEALNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYDTVATSTTANTSSSNVNNSIEIIDHSPDNSFQYSPSASNLQTHQQQQQTHQQIHIQQQSQQHHQQHLQQQDIITPSSQVHSQTGGQIQQIYHSNPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00234095;
- 90% Identity
- iTF_00234095;
- 80% Identity
- iTF_00234095;