Basic Information

Gene Symbol
ct
Assembly
GCA_939192785.1
Location
CALNDV010000234.1:33125-36549[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.8e-32 3e-28 97.6 0.0 3 76 375 449 373 452 0.96
2 2 9.4e-31 4.1e-27 94.0 0.0 3 76 573 647 571 650 0.96

Sequence Information

Coding Sequence
ATGCCACAATATGGTCGATCTGATGAATCAGTTGCTGAGGATCGTATTGCACATATTTTATCGGAAGCATCAAGTTTAATGAAAACTCCACCAGGTCATGGaccaccaccatcatcatcatcgtcttcacaacatcatttaccacaccatcagtcaccattacaacagccacaacaacaacatccgtcaccgcatcatcatcatcatcatcaacatcatcatcatcaacaacaacaacagcaacaacagcaacaacaaagtcatcaacaatcatcatcagctggaagtcatacagaagatacacatagcAATGAAGATTCAAAATCACCACATCATAATCAATGCCCTTCACCATTTTATAAGGACTCAATGCAACGACGAATGAAAAACAATGACAACGATGATCTTTCACAAGACAAAGTTGCAAGAATTTATCAAGAAGAACTCGCTAAATTAATGTCACGTTCACCAAGAGAAGCTGGTTTCCCCAGTTTTCTCTTTCCACATTTTTTTAGTGGTGGCATGCCACCATCGGCAATGAGTCAAATGCAGGATGATAATATTCGAATGGCTTTAGAAGCTTATCATCGTGAACTTGCAAAATTACAACAAACTGGTGGAGCCATCCCAAATTTTCCAAATCTCCCTAGTTTGTTAGCATTACAACAGCACGCTTTGAATGGAGCTCAAGATTTATCAGTGCCAAAAGAGAAAAGTGTGAAAATTAATGGTCAACAGAATTCATCATCATCGTCATCGTCAATTGATCAACATGATCAAAATACCAAAGAATCAAATGCTAGTGAAGATGCTTTAAGACATTCGAGTGCATTTAGTTTAGTTCGACCAAAACAAGATACACCTGTTGGAGGACCACCAACATCAAGCAGCACTCCAGTAAATCCAACATCAGCTGCTCCAAGTCCATTGAGTAATTCTATTCTCCCGCCAGCTATGACTCCAACAGATGATTTTTCAGCAGCAGCAAGTCCATTACAGAGAATGGCTTCTATAACAAATTCATTGATTACTCAAGCACCAGTATCTTCACATCATGCCACTCCACAACGACCGATGAAAGCAATTCTTCCACCAATTACGCAACAGCAATTCGATATGTTCAATAATCTCAATACAGAAGATATTGTTCGTCGAGTAAAAGAAGCCCTTTCACAGTATTCTATTAGTCAAAGATTATTTGGTGAATCAGTTTTGGGTCTTTCACAAGGATCTGTTTCAGATCTGCTGGCTAGACCCAAGCCATGGCATATGTTAACGCAGAAAGGTCGTGAACCATTCATAAGAATGAAAATGTTCTTAGAAGACGATAATGCAGTTCATCGTCTCGTTGCCAGTCAGTATAAAATTGCTCCAGAAAAATTAATGAGAACCGGAAACTATAGCGGAAGTCCACAAATACCAACAAGTATTGGAAACAAAATGATCCCAATGCAGAAAATGATGAGTGATTTGAAAATGGATCCACCACATATATTGCAAATGCAATCACCGGCAATGAGTCATATTCCGACATCGCAACATCAAGGAATGCTTTTAACGCCGCCAGGCATGCCACCTCATCATGCCATTAGTTTGCCAAATCCCGTAGAAAAGAAGCCAATGATGATGCCTGTTCATTCTCCTCAACAGAGCAATGCCATGCGTAATATGCATCAACATATGTCACCTACTGTATATGAAATGGCAGCATTGACACATGATCTCGACACACAAGTTATTACAACGAAAATTAAAGAAGCACTTCTTGCCAATAATATCGGTCAGAAAATTTTCGGAGAAGCTGTTCTTGGATTGTCTCAAGGATCTGTGTCTGAATTGCTTTCAAAGCCAAAACCCTGGCATATGTTGAGTATCAAGGGACGAGAACCTTTTATTAGAATGCAGTTGTGGCTGTCAGATGCCAATAATGTAGAAAGATTACAAGCAATTAAAAATGAAAGACGAGAAGCGAGCAAAAGACGAAGATCAACTGGTCCTGGAAATCAAGACAATAGTTCAGATACAAGTAGTAATGATACAGCTGACTTTTATACAAATAGTCCAGGTCCTGGATCTGTTGGATCAGCAGGCGCTCCACCCAATAAAAAGCAACGTGTTTTGTTCTCTGAAGAACAAAAAGAAGCACTTAGATTGGCATTTGCCCTTGATCCATATCCAAATGTAGCTACAATAGAATTTTTGGCAAATGAATTAGGTTTAGCAACACGAACCATTACCAATTGGTTTCACAATCATAGAATGCGTTTGAAACAACAGGTGCCACATGGATCAAGTGAACCTGTTCCAACACGTGAAAGTCAATCAGGTACACCATTCGACCCTGTACAATTCAGAATTTTATTAAATCAAAGACTAATGGAACTGCAAAAAGAACGCATGGGATTGACTGGTGTGCCAATTCCATACCCACCGTATTTCGCAGCTAATCCAAATCTGGCAGCGTTAATTGGCCGAGGTCTTTTACCTGGCGGTGAACCAGACTTAGCAGCATTGAACAATGCATTCAAAGAACAAATGAGTGGTCTGGACTTATCGATGAGTTCTCTTAAACGAGAACGAGATGAAGATTTTGAAGATGTCGAAGGTGAAGCAGATAGTCATGCATCAGATACTGCTTCTATCGATGGATCTGATGTAAAGCTAGATTTTAAAGATACTCCAACATCGTCCTTTCCTGCTGCAGCACTACAATCGAGAACATCTCGACGTAAACCAGCTGCCCCACAATGGGTGAATCCTGATTGGCAGGATGATATAAAGGCTGCAGCTGCAGCAGTAGCTGCTGCTGCAACTGGTGGAGCACCTTTAGCTGGTGCCAATCCTACAGGTGGCAGTGCAAGCGATCAAGAGGTAATTATAAATGGTGTTTGCGTTATGCAACAGCAAGCTGCTGATTACAGTAGAAAATCTGGTGGTGAAGAAACCGTCCGTGTCGAACCGACAGCGGTTCAAGATCGTCTTCGTAatattgctcacgatgatgataatattgcatcagacaacgatgatgaagatgatgatgTACGCGGTGAAACCGAGTCAAATTTTTCAAATAAACCGTCCGATTGCGGTGAAGTAATAAATGAGAATGATGCAGAAAATGAACCACAAGAATCTGAACCAACAATTGTTAAAATAAAACAAGAAGATTGCAGTGAAGAAATTAGTAGTAGACGAAGTTCAACAAAAAGTTTAGAAAATAGTGAACAAACAAAAGAACAAGACGATGATAATGAAGGTGAATGGAATTATTAA
Protein Sequence
MPQYGRSDESVAEDRIAHILSEASSLMKTPPGHGPPPSSSSSSQHHLPHHQSPLQQPQQQHPSPHHHHHHQHHHHQQQQQQQQQQQSHQQSSSAGSHTEDTHSNEDSKSPHHNQCPSPFYKDSMQRRMKNNDNDDLSQDKVARIYQEELAKLMSRSPREAGFPSFLFPHFFSGGMPPSAMSQMQDDNIRMALEAYHRELAKLQQTGGAIPNFPNLPSLLALQQHALNGAQDLSVPKEKSVKINGQQNSSSSSSSIDQHDQNTKESNASEDALRHSSAFSLVRPKQDTPVGGPPTSSSTPVNPTSAAPSPLSNSILPPAMTPTDDFSAAASPLQRMASITNSLITQAPVSSHHATPQRPMKAILPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHRLVASQYKIAPEKLMRTGNYSGSPQIPTSIGNKMIPMQKMMSDLKMDPPHILQMQSPAMSHIPTSQHQGMLLTPPGMPPHHAISLPNPVEKKPMMMPVHSPQQSNAMRNMHQHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQAIKNERREASKRRRSTGPGNQDNSSDTSSNDTADFYTNSPGPGSVGSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLANELGLATRTITNWFHNHRMRLKQQVPHGSSEPVPTRESQSGTPFDPVQFRILLNQRLMELQKERMGLTGVPIPYPPYFAANPNLAALIGRGLLPGGEPDLAALNNAFKEQMSGLDLSMSSLKRERDEDFEDVEGEADSHASDTASIDGSDVKLDFKDTPTSSFPAAALQSRTSRRKPAAPQWVNPDWQDDIKAAAAAVAAAATGGAPLAGANPTGGSASDQEVIINGVCVMQQQAADYSRKSGGEETVRVEPTAVQDRLRNIAHDDDNIASDNDDEDDDVRGETESNFSNKPSDCGEVINENDAENEPQESEPTIVKIKQEDCSEEISSRRSSTKSLENSEQTKEQDDDNEGEWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00118591;
90% Identity
iTF_00234584;
80% Identity
iTF_00233794;