Basic Information

Gene Symbol
grh
Assembly
GCA_939192785.1
Location
CALNDV010000938.1:135254-208544[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-64 1.7e-60 204.0 0.3 24 221 511 703 497 705 0.94

Sequence Information

Coding Sequence
ATGTCTGTCGGAACAAGTACAGATCAATTATCAAATCATGGCAATCATACAGCAAATGATGTTGTCAATCATGTACAAAATGGTCAAACAGTTATTAATCAAATTGGTTATTTATCAACAGCAACAGCAGCACCACCACGTTATTTTGAACATCCTTTATCAGCTGCAACATCAGCAATATTAAATATATCATCAACAAATGGTCCTTCATCACACGTGTCACAAAATAATGGTGCTACTGTTGTTGTTTCACATCATCATGATCACAATGGAAATGGTAATGAAAGTAATAGTGGCGGAAATCATTCTGCAACAAATAACGGAAATACAGAAAATGGTAATGTAGTAAATGGTGTCGGTGGTGGTAATAACGGTACAAATAATGGTAGCAATAATGGTGCTACATCAGGTGTCAATATAAATGTAATAAATGCACAACATCAGCAACAGATTCATCAGATCCACACCTCCAATGGCAGTACATCTTTTGTTTATGAATATTATAAAGTTGCTGATAGGGGAGATAATGGGGATTTGCATTGGAGTTCCCCTACCACTGCTAAATTGAATGGACAGACCACACCTCTTGACGTATCCGGCCTATCGCAAAATGAAATACAAGGTCTATTGCTAGGTTCACACCCATCATCGTCATCAACAACAACGACAACATCACAATCAGCTGCTGTCGTTGTAGCTGATCATCAACAACAGCAACAAACGATTAATGTCAAACGTGAACCCGAAGATCTACGAAAGGATCCAAAATGTGGAGGAAGAAGTCAAAAGGTATTGGTCGTTCAATCACCATCATCATCAATACAAATCAAAGAGCCACCACCAAGTCCTGGGAGTCCATCAGCAGAAACAATGTACGCTGCCACGGGCGGCACTCAAATTTACCTTCAGGGTCCCCATCAAACAAGTTCATCAACAACTTCTGGTTCCAATGTAAACACACAGACACCAAGCCCTGGACCATATGTGACTGCCGATCAATACGGTATGTACACAACTCGTTTAGCAACTGGACCTAGCTCAACTTTTATATCGGAACCATATTATCGTGAATATTTTTCAACGACTGATGGACAAGGATATGCACCAACAAGAACTATTTATGGTGATAATGATGGACCACAGCCAGGTACCACGTATGAAGGGCGTTTTGCAGCTACCGCACATACTAAAAATGGTACACCAGTTTATGCTAAGACTGTTACAGCGGCTGGCCTTACAGTTGATCTACCAAGTCCGGATTCTGGTATTGGTGCTGATGCAATAACACCAAGGGATCAGAATAATATTCAACAGTCTTTCGAATATGCAGAGCTTTGTCAGCCTGGTACATTATTGGATGGTAATGGTGCAATTCCTGTTTCAGTTAGTAGTATACAGAGAGCTGTAAATGTTCATGCCGGACAAAATAGTCCAACAACATCACTTAGTAATAATAATCCAACATCAAGATCACGTCCTTGGCATGATTTTGGTAGACAAAATGATGCTGATAAAATTCAAATACCAAAAATATTTTCGAACGTAGGATTTAAATATCATCTAGAAAGTCCCATTAGTTCATCACAAAGACGAGAAGATGATAGAATAACATACATAAATAAGGGACAATTTTATAGCATCACATTAGAATACATTCCAGATCCAGATAAACCGCTTAAAAATACAACAGTCAAAAGTGTCATAATGCTTATGTTTAGAGAAGAAAAAAGTCCTGAAGATGAGATTAAAGCCTGGCAATTTTGGCATAGTAGACAGCATTCTGTTAAACAGAGGATATTAGATGCTGATACAAAAAATTCTGTTGGACTTGTAGGATGTATAGAGGAAGTGGCCCACAATGCCATAGCTGTCTATTGGAATCCACTTGAAAGTTCTGCCAAGATAAACATTGCTGTTCAGTGTTTGAGTACAGATTTTAGCAGTCAAAAAGGTGTAAAGGGCCTACCGCTTCATATTCAGATTGATACATTTGAAGATCCACGTGATACACAAGTCTTCCATCGAGGCTATTGCCAAATCAAAGTCTTTTGCGATAAGGGAGCTGAACGTAAAACTCGTGATGAAGAAAGACGAGCTGCTAAGAGGAAAATGACTGCAACAGGACGAAAAAAATTAGATGAATTATATCATCCAGTTGCTGATCGTTCTGAATTTTATTCAATGCAAGATACAACAAAACCTCCAGTCCTTTTTTCGCCCGCCGAAGATCTTGAAAAGCTTTCTGGAATGGAACTACAGAATTTCTATGGCCATGAGACTGATTCATTATCTGGAACACCGGATGGCCTTAAGGGTACATCACCATTTCTATTACATGGATCACAAAAGCCTTCAACACCAACACTTAAATTTCATAATCATTTCCCGCCAGATGTCCAGACTGACAAAAAGGATCATATACTTGATCAAGCTCTTGTGCCAGGATCAATGTCTGAATTTGGACCAGCATTAAAACGTTCTAGAATGACTCCTCCATTAAGTGAACGTGTCATGTTATATGTTAGACAAGAGAATGAAGAAGTTTATACGCCATTACATGTTGTGCCACCAACTACAATTGGACTTTTAAATGCGATCGAAAATAAATACAAAATATCTACAACAAGTATAAATAACATTTATCGAACAAATAAAAAGGGGATTACGGCGAAAATTGATGATGATATGTTATCATATTATTGTAATGAAGATATTTTTTTACTGGAAGTTCAACAAATTGAAGATGATCTATTTGATATAACATTAACGGAGCTTCCGAATCATTGA
Protein Sequence
MSVGTSTDQLSNHGNHTANDVVNHVQNGQTVINQIGYLSTATAAPPRYFEHPLSAATSAILNISSTNGPSSHVSQNNGATVVVSHHHDHNGNGNESNSGGNHSATNNGNTENGNVVNGVGGGNNGTNNGSNNGATSGVNINVINAQHQQQIHQIHTSNGSTSFVYEYYKVADRGDNGDLHWSSPTTAKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSSSTTTTTSQSAAVVVADHQQQQQTINVKREPEDLRKDPKCGGRSQKVLVVQSPSSSIQIKEPPPSPGSPSAETMYAATGGTQIYLQGPHQTSSSTTSGSNVNTQTPSPGPYVTADQYGMYTTRLATGPSSTFISEPYYREYFSTTDGQGYAPTRTIYGDNDGPQPGTTYEGRFAATAHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFEYAELCQPGTLLDGNGAIPVSVSSIQRAVNVHAGQNSPTTSLSNNNPTSRSRPWHDFGRQNDADKIQIPKIFSNVGFKYHLESPISSSQRREDDRITYINKGQFYSITLEYIPDPDKPLKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVADRSEFYSMQDTTKPPVLFSPAEDLEKLSGMELQNFYGHETDSLSGTPDGLKGTSPFLLHGSQKPSTPTLKFHNHFPPDVQTDKKDHILDQALVPGSMSEFGPALKRSRMTPPLSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMLSYYCNEDIFLLEVQQIEDDLFDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00118458;
90% Identity
iTF_00118458;
80% Identity
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