Basic Information

Gene Symbol
slbo
Assembly
GCA_939192785.1
Location
CALNDV010000616.1:30028-31338[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.2 8.4e+03 -3.2 0.5 26 38 186 198 184 204 0.60
2 2 1.7e-13 1.7e-10 40.7 13.6 3 65 351 413 350 413 0.96

Sequence Information

Coding Sequence
ATGGAATCACCTCAAATGTACGATTCTGTTCAATCATTATCACAATTAGATTTAAAGAAagcagcagcagcagctgcagcagttgcagtagcagttggtagtggacaaacaacattaacaatggcaaatacaaattctaaTGGTACAAATGGTACAGCACAACAATCAAATGGAGCAAATAATTCAAATCAATCTGGTACAGTGACAAATTCTAATAATTCACATCACAATGCTGCATTAGTTGTTAAACAACAACAAGCTGCACATCATATgcaacaagctgcagcagctaataataataataatacaacaacaacaaataacaataatgcaacaaataataatagtagcaTTTTACAAAAGCACATGCTTCAACAATATGCACAAAGTGATCTAGATGAATTAACTGCACAAGAGATCACATTGGATTTGCAACATTTAATCGATGATCAATTTCGAGAGCAGGAAACATTAGGAATATTTGGAGATATGGTAACAAATCAAGGAAATCCGAATGGTAATCTTCAGGCGAATGGTGTCGTTAATGCAGCAGCAAAAGTCCTTCAACTTCATCAGCAACATCAACAGCATCAACAGAATTTACGATCACAACAATCAAATCAAGGATATTCACGTGGAGCTTTAGCTTATATGCCACAAGCAGTTCATTCTGGAGCAACTTATGCAAATAATTCAAGTGATGAGAATAGTTCAATTGGTTCCGAGACATCATCAAATATCAAAGAGGAACCAATCGATCCACAGGAATACCGTCGTCAATTGCAAGTTAATGGTGCAGCACCATTTCTTGGAGCTGCTGCTGCTGCAGTTAGTGTTAATGGTGGTAATAACGGTTTATACCCAATTACACCGAATGCATATCAAACAAATGGTAATGGTAGTTCATTTACAACCCTTACACCAGCTGGTGTATTACATCATCAAGCTTTACCACATTTAACTGGTGCACATCTTGCCTCATTGAAACATCACAATAAACCGATGATGCCACAACGTAAACAATCAACAAAGGTAGTTGATAAAGGTACAGATGAATATCGTCGTCGACGTGAACGTAATAATATTGCAGTACGTAAAAGTCGTGAAAAAGCAAAGGTTAGATCACGTGAAGTTGAAGAAAAAGTTAAAACATTATTAAAAGAAAAAGAGGCTCTATTACGACGTTTAGAAGAAATGACAAATGAAATTCAATTACATAAACAAATTTATATGCAATTAATGAATCACAGTAATCCAGAAATAACAAGAATAGTAAGGAGTTTTCTAAATATGAATGATCATGGAATATAA
Protein Sequence
MESPQMYDSVQSLSQLDLKKAAAAAAAVAVAVGSGQTTLTMANTNSNGTNGTAQQSNGANNSNQSGTVTNSNNSHHNAALVVKQQQAAHHMQQAAAANNNNNTTTTNNNNATNNNSSILQKHMLQQYAQSDLDELTAQEITLDLQHLIDDQFREQETLGIFGDMVTNQGNPNGNLQANGVVNAAAKVLQLHQQHQQHQQNLRSQQSNQGYSRGALAYMPQAVHSGATYANNSSDENSSIGSETSSNIKEEPIDPQEYRRQLQVNGAAPFLGAAAAAVSVNGGNNGLYPITPNAYQTNGNGSSFTTLTPAGVLHHQALPHLTGAHLASLKHHNKPMMPQRKQSTKVVDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEEKVKTLLKEKEALLRRLEEMTNEIQLHKQIYMQLMNHSNPEITRIVRSFLNMNDHGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00234557;
80% Identity
-