Basic Information

Gene Symbol
RERE
Assembly
GCA_011952255.1
Location
NW:4549737-4560275[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-08 1.9e-05 23.9 0.2 2 45 129 173 128 174 0.88

Sequence Information

Coding Sequence
ATGTCTGCCGGCACCCAGGGCGAGATTCGGGTTGGCCCTTCGCACCAGGAATTGGTTTCTTGTCAGGCCCGTTTGCCTGAGTATCGGCCGGGTATACCCCCTGGAGAGCTGCTTCCTGATCCAGAGTTTTCTAAAGAACGAGAGGAGCTAAGATGGATTCCAGCTATGGCATTGGACGGGGATCTTCTGATGTACTTAAGGGCAGCTCGATCTATGGCTGCGTTTGCTGGTATGTGTGATGGAGGATCCCCGGATGACGGTTGTGTGGCTGCTTCCCGTGACGACACGACTATCAATGCTCTGGATATCTTGCACGACTCTGGCTATGATCCAGGAAGAGCATTGCAAGCTTTGGTTAAATGTCCTGTACCTAAAGGCATCGATAAAAAGTGGTCTGAGGAGGAAACTAAACGCTTCGTCAAAGGACTTCGGcaatttggaaaaaatttcTCAAGAATCAGAAAGGATCTCTTACCTCATAAAGACACGCCGGAATTGGTTGAATTCTACTATTTATGGAAGAAAACACCTGGAGCGAATAATAACCGACCTCATCGAAGAAGACGACAGGGTTCGCTTAGGAGAATTCGTAACACGCGAAACTCGCGTGCTGGCACTCCCAAAGAAGAGGTGCCAACTCCACCCAAAGATACTCCACCAGCTAACGTCAATCAGAAGGAGCCTGTCTCAGAACCGGAAACTGTACCTGTTGGGACACCTGCGAGCAATAATCCTGGTGGGGAAATTAGTTCCGTAACAGAAGACGATAACTCGGAAGAGGATAGTGATTCCAGAGACACAAACACTAACGGAGCAACGCATTCGTGTCAACATTGTTTTTCGACTAATTCGAAGGATTATCAGGTAGCTGGCAAGGACAGGTTATTGCTTTGTACGGAATGCAGGACACATTTGAAGAAGACCGGAGAACTACCGCCTGCGCCACCATATCTGTTCCGCCCTGTGCCTGCGGAATCACCAGATAGCCCAGGGAGAATGCGTACAAGAAACAAGGCTAAGGAAACGCCTAGACCTGCAAGACCACGACGTACAGGAGGAACGGATACTCCTGATCAGGAAaagcagcagcaacagcaacagaCGCCAGacaagaataagaaaaaatctAGTAAGCCAGAGACGCCGAAGAAAGGTCAAAAACGACCTCAGACGGATGAAGTGGATGAGGACAAGGAGTCTCAGAAGCGAAAACGTCCTGGTGAACGTCCTGAGAGTCCCTCGGAGTCTCTCACGACCGATAGCAACTCTCTCATGGATGAACCTGAAAGGGAAGGAGAAGGTGATACGAATGAAAATCAACCTACTCCTGTTACAGTGCCAACTGAAGAGCCTGTTAGTCCAGCAGTAACCACACCGGAAGAGCCTTCTGAACCAACTCCAGTTTCTACCCCCGTACCAACGCCTATACAGACTTTACCAATTTCTGTTCCTGTTATCCACACTTTGGAAAAGAAACCGTTATTGGAAGAATCAGTAGAAACGAAGGATCAAATAGAAGATGTTCCTTTAGCTATGAATCAGCCATTAAAGTTGGAACCTATGCCAATAGAACCAGCCATGTCACCATCTAACGAAGATATGAAGGAGCCCGAACAGCAGCTGAATTTGACCACATCGCAGTCGTTAAATATGAACGATATGAGTCAAAATATGCCACGTAATTTGTCACAGTCGATGCAGAACAGTGGTATTTGTGCTTCGACTGGTTCGCAGGGCATGCAGAACTCGCAGATTATGTCTCCAACGCACCAAGGACTGCCACTTAATATGCAGTACACACCCAATGTTCCTCCTGTTCAGAATGTGCCGCAAAACTTATCACAGAGTATGCAGATGCCGCCGAACATACCGCAGAATATGTCAAATGCGCAAAACATGGGACCAACGCAAAACCTTCGAGCACACGGTGAGAACCTGTCAAGTACGCAAAATATGCCTCAAAGCATACCGGGACCACCATTGAACCTCAATATCTCGCAAAGCATACCAACGAACATGACGCAGATGCCTCAGATGCCGAGTTCGCCACAACCACTTGGCTTAACCGTCATGTCTTCTGAAAACAGAATGTCCGAAAGAATTTCCGACGACAGACTACCTCCGGAACGGATTAGAGATAGTAGGATACCTGATAGAATACCAGAGAGGATACCAGAAAGACCAGAAAATAACGAGCCTGAGAGGAACGAATCAAATAATCTGTTCCAACCCATTCAGTCAAGTGGAATGTTATCCATGGAGAAACCGTCGCCGATGTACAATTTAGCTGGAACGCCACCAATGGAGCCTCAAAATTTGAAGATCAAGCAAGAGATTATTCCTCCTGAGCCAGATCCGCTTCAAAGTTTAAAGGAAGTTAAAGTTCCTGGTTTTCAGTCTGGTTTTCCTGGTCCGAGTTTggagaatattaaaaaagatcCAGATAGTTCCAGCAAACCACCAACACCTAGCAAGCACTCCATACCAAGCAGTCAGCCTGTTCCTCAAATACAATCTGTGGCAGCTTCCCCAACGCCGACTCTTCCACCACCACCTACGTCTATTCCACAGCCTGTGATGCATCCAGCTCAGCAACCAAGTCCTCATATGGCTCATCCATTCCACCCACACCATCCCTTGATGCATCACTCATTATTTACCGCCATGCATCCGTATCATCCTCATGCTTACCCAGGTTATGCTCCAGTTGGTGCTTATCCCTCGTTTCCACCATATCCTTACGGTGTTCCCCATGCAATCCCTCCTCCATCCCCACAAAGGAGTCAAGAAAGTACAACTATGATGACGGCACATCATTCAAGCACGAGTTCCAGTGTGACAacgagagaagaaggagagaatCTCATCGCGACGCATCATCACTCTTCTACAATGCATCAAGCCACGGCTCTGCATCACGACAAACTGTTGACCATCTCCTCTCACAGTTCTCATAGTCACTCTTCGTCCCATAGCTCACATAATACTCAACGTAAACCATCGCTAGTTCCAACCACATGTCTGACATCCAGTAGCTCAGCGCATCATCACCATAGACCACCGCAATCTCAGCCTCCAGTCGCTCCTGAACCTAAAATAGAACCTGACCTTGTAGaacaagaacaagaagaaCCCCCAAGCCCACGAGGCCCATCTCCAGAGCCTCGAATTGAAGATTCTGAATGTCACAGATCACAATCCGCCATATTTCTACGACATTGGAACCGAGGCGAGAACAACTCTTGCACTAGAACAGATCTAATGTTCAAACCTGTCCCAGATTCAAAGTTagcaagaaagagagaggaaagaTCACGGAAGCAAGCtgagagggaaagagaagaaCGTGATAGAGCTGCGGCGCAACAAGCTAGGAAAATGACCACGCCTGAGAAGCAGCCAGAAACATGTAAGCCGCCTAGTCGTGGGCCTCTTGAGCCTGTCGTGTCTCCGTATGACAGATATGCTGCAAGACCGGGATCCTACGCTGATACTCCTGCTTTGAGACAGTTGTCCGAATACGCTCGACCACATGCTGCATTTTCACCTGCTAGACATCCTGCGCCACCAGATCCGATGTTACATTACATGTATAGTCCTGCTGCTCGAGAACGCTTAGAACTAGAACATTTAGAACGTGAGAAGAGAGAACGAGAAATAAGAGAATTACGCGAACGAGAATTAAACGATCGATTAAAAGAGGAGCTTCTGAAGGGAACGCCTAGACCTATGCCAGCGCCAGTGGATCCACATTGGTTGGAAATTCATCGACGTTACGCGGCCGCTGGACTCGCTCCTGGACCGTCAGGACCTCCTCAGGCTCTCCACCAATTCAGTCTTTATGGAGCACCGCCTGGGCCCAGTCAGTTGGAAAGAGAACGTTTAGAAAGACTAGGGATACCGACTGCAGCCGGCGGGGGGCCAGCGGGTGCAGGGGCTGGCCATCCCGTAGCGGCTCATCACCACGGCCAGCTGGACGAGCGACTGGCTCTAGCTGCTGACCCGATGGTCCGGTTGCAGATGGCTGGCATTTCGCCCGAGTATCATGCTCACACTCACGCGCATACGCATGCGCATACGCACTTACACTTACATCCGGGACAGCAGCAGGCCCAGCAACAGGCTCAGCAACAGCAGGAAGCGGCTGCGGCTGCAGCTGGATTCCCCCTGCCTGCGGCAGCTGGTGCAAATTATCCTCGACCAGGCTTAATGCCCCGTGACCCAGCACTGGCTCTTCATCCCGCGGAACTTCTTGGAAGACCGTACGCGGATATGGCGGCGCATCACGAGCAATTACAACGTCATCTAATGATGGAACGCGATCGATTCCCTCCTCATGCATCGCTTGTTGCACACCACGAGGAATATCTAAGACAACAGCGCGAGCGTGAGCTTAAAGTTCGCGCACTGGAAGAAGCTGCACGTGGATCACGCCCTTAA
Protein Sequence
MSAGTQGEIRVGPSHQELVSCQARLPEYRPGIPPGELLPDPEFSKEREELRWIPAMALDGDLLMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDILHDSGYDPGRALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFSRIRKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRAGTPKEEVPTPPKDTPPANVNQKEPVSEPETVPVGTPASNNPGGEISSVTEDDNSEEDSDSRDTNTNGATHSCQHCFSTNSKDYQVAGKDRLLLCTECRTHLKKTGELPPAPPYLFRPVPAESPDSPGRMRTRNKAKETPRPARPRRTGGTDTPDQEKQQQQQQTPDKNKKKSSKPETPKKGQKRPQTDEVDEDKESQKRKRPGERPESPSESLTTDSNSLMDEPEREGEGDTNENQPTPVTVPTEEPVSPAVTTPEEPSEPTPVSTPVPTPIQTLPISVPVIHTLEKKPLLEESVETKDQIEDVPLAMNQPLKLEPMPIEPAMSPSNEDMKEPEQQLNLTTSQSLNMNDMSQNMPRNLSQSMQNSGICASTGSQGMQNSQIMSPTHQGLPLNMQYTPNVPPVQNVPQNLSQSMQMPPNIPQNMSNAQNMGPTQNLRAHGENLSSTQNMPQSIPGPPLNLNISQSIPTNMTQMPQMPSSPQPLGLTVMSSENRMSERISDDRLPPERIRDSRIPDRIPERIPERPENNEPERNESNNLFQPIQSSGMLSMEKPSPMYNLAGTPPMEPQNLKIKQEIIPPEPDPLQSLKEVKVPGFQSGFPGPSLENIKKDPDSSSKPPTPSKHSIPSSQPVPQIQSVAASPTPTLPPPPTSIPQPVMHPAQQPSPHMAHPFHPHHPLMHHSLFTAMHPYHPHAYPGYAPVGAYPSFPPYPYGVPHAIPPPSPQRSQESTTMMTAHHSSTSSSVTTREEGENLIATHHHSSTMHQATALHHDKLLTISSHSSHSHSSSHSSHNTQRKPSLVPTTCLTSSSSAHHHHRPPQSQPPVAPEPKIEPDLVEQEQEEPPSPRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDSKLARKREERSRKQAEREREERDRAAAQQARKMTTPEKQPETCKPPSRGPLEPVVSPYDRYAARPGSYADTPALRQLSEYARPHAAFSPARHPAPPDPMLHYMYSPAARERLELEHLEREKREREIRELRERELNDRLKEELLKGTPRPMPAPVDPHWLEIHRRYAAAGLAPGPSGPPQALHQFSLYGAPPGPSQLERERLERLGIPTAAGGGPAGAGAGHPVAAHHHGQLDERLALAADPMVRLQMAGISPEYHAHTHAHTHAHTHLHLHPGQQQAQQQAQQQQEAAAAAAGFPLPAAAGANYPRPGLMPRDPALALHPAELLGRPYADMAAHHEQLQRHLMMERDRFPPHASLVAHHEEYLRQQRERELKVRALEEAARGSRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00633569;
90% Identity
iTF_00226534;
80% Identity
iTF_00220522; iTF_00214964;