Bvan009929.1
Basic Information
- Insect
- Bombus vancouverensis
- Gene Symbol
- KDM5A
- Assembly
- GCA_011952275.1
- Location
- NW:1051551-1064955[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-25 1.9e-22 78.7 0.0 2 89 109 192 108 192 0.94 2 3 2.9 5.1e+03 -2.8 0.1 49 81 823 853 820 857 0.65 3 3 1.8 3.3e+03 -2.2 0.0 49 64 1033 1048 1030 1059 0.77
Sequence Information
- Coding Sequence
- ATGGTATCGAGGTTCGACACGAACTTCGGTTGTGAAGACTTTTTCGGGACTTATCGTTGCATCCAAGACATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTCGTCATACCTCCAGAGGCGCCGGTTTTCGAACCGAGTATCGAAGAGTTTCACGACCCTCTTGGCTACATTGCAAAAATACGACCGATCGCAGAGAAGTCTGGCATTTGTAAGATCAAACCGCCGCCTAATTGGCAGCCACCATTTGCTGTTGATGTagataaattcaaatttgttCCGAGAATACAAAGGCTAAACGAATTGGAGGCAAAAACCAGGATAAAACTTAATTTCTTGGATCAGATTGCAAAATTCTGGGAACTTCAAGGTTCATCTTTAAAAATCCCCCTTGTTGAACGCAAGGCTCTTGATTTATATTCTTTACATAAGATAGTTACCGATGAAGGAGGAATTGACACAGTTACGAAGGAAAGGAGATGGgcaaaaattgcaaataaattaGGTTATCCTTCTGGTCGTAGTGTTGGAAGTATTCTAAAAAATCACTATGAACGTATTTTGTATCCATTTGATGTGTTTAAACAAGGAAAGACATTGGCAGATATTAAAATTGAACCAGATTCTAATGTAAATGAGAAAAAAGATAGAGATTATAAACCACATGGAATTATATCACGGCAACAAATTAAACCCCCACCTGAGAAATTTTCCCGTCGTTCTAAGAGATTTAGTGGTCAAGAAGAAAAGCAGGAAGTATCTATTAAACAAGAGGATTGTAAAGAGGAATGTGATTCTGACAATGATTGTAAAGATGGAATTAGAAATAAACAATATGATGATAAAGATAATAGTAAAGAACTTAAAAAATTACAGTTTTATGGACCTGGCCCAAAAATGGCTGGATTTAATAccaaagaaggaaagaaatcGAACAAAACTAGAGGTGTAAAACTTATTTATGAAGTTGACCCATTGGCAAAGTATATTTGTCACAATTGCGGAAGAGGTGATAATGAAGAAAGCATGCTTTTATGTGATGGATGTGATGATAGTTATCATACTTTTTGTCTTATGCCACCTTTGACAGAAATACCAAAAGGTGATTGGAGATGTCCAAAGTGTGTTGCTGAAGAAGTTTCCAAGCCAATGGAAGCATTCGGTTTTGAGCAAGCACAAAGGGAATATACACTTCAACAATTTGGTGAAATGGCTGACCAATTTAAGAGCGACTATTTTAACATGCCTGTACAtATGGTGCCAACATCACTagtagaaaaagaattttggcGAATTGTTTCCTCAATTGACGAAGATGTAACAGTCGAATATGGCGCAGATTTACATACAATGGATCACGGGTCGGGATTTCCAACAAAAACAAGCGTCAATTTGTTTACATGTGATCAAGAATATGCTGAATCTTCATGGAATTTGAACAATTTACCAATTTTACGAGGAAGTGTATTAGGTCATATAAATGCTGATATTAGTGGTATGAAAGTTCCATGGATGTATGTTGGAATGTGTTTTGCAACATTTTGTTGGCATAATGAGGATCACTGGAGTTATTCAATCAATTATCTACACTGGGGAGAGCCGAAAACATGGTATGGTGTACCAGGTTCTGAAGCGGAACGATTTGAACACTCAATGAAATCGGCTGCACCAGAATTGTTTCATAGTCAACCAGATTTACTTCATCAGTTAGTTACTATTATGAATCCAAACATTTTAACAAATGAAGGCGTTCCAGTATTCAGAACTGATCAACACGCGGGAGAATTTGTAGTGACATTTCCGAGAGCGTATCACGCAGGTTTTAATCAGGGTTACAATTTTGCTGAAGCCGTGAATTTTGCTCCCGCTGATTGGCTCAAAATTGGACGAGATTGCATAACGCATTATTCAAATTTAAGACGATTTTGTGTATTTTCTCATGATGAATTGGTGTGTAAAATGTCATTGGACCCAGACTCATTAGATATAGGAATCGCAACTGCAACTTACCATGATATGCTTCAAATGGTAGATGATGAGAAGAAACTACGGAAGAATCTGTTGGAGTGGGGTGTAACAGAAGCAGAACGAGAAGCATTTGAACTTTTACCAGACGATGAGAGACAGTGTGAAGCTTGCAAGACAACCTGTTTTTTGAGTGCAGTTACATGTTCATGCCAAAGTTCTCAATTAGTTTGTTTAAGGCATTTCACAGATCTTTGTGATTGTCCTCCAGATAAGCATACATTACGTTATCGCTATACTCTAGACGAATTACCAATTatgttacaaaaattaaaattgaaagcAGAGTCATTTGACTCCTGGGTAACAAAAGTAAAAGAGGCAATGGATCCTGATAAAAAGAGTGATAAAATCGAATTAAGTGAATTAAAAGAACTGTTAAATGAAGCcgaaagtaaaaaatttccAGAAAGTGAATTGCTCACAGCTTTAACAACTGCTGTACAAGATGCTGAAAAGTGTGCAAGTGTTGCGCAACAACTTTTGAGTAATAAACAACGTACCAGAACCAGACAATCTGTTGAAACTAAGTACAAGCTTACAGTAGAAGAATTAACACTTTTCtataaagaaataacaaatCTGTGCTGTGAACTCAAGGAGTCTGATGGTGTAAAATTTATACTTGATCAAGTATTGCAATTTCAAACAGAAGCAGAAGAACTAGAATCTAAAGAGGATGATTGTGATATTGAACAGTTGGAAAAATGTATTGAATTTGGAGATTCTATTTGTATTGAACTACCTCAACTTACACATTTGAGACAaaaattaACACAAATGCAATGGCTTGAGGAAGTAAAGTCTGTTCAAGAAGATCCAAAGTCAGTACATCGTGACGATTTAGCAAAATTAATTGAGAAAGGTATGATAATGCCTCCTCATTTAAGTATAGAAAATACTCTCTCAGAGTTACAAGCATTAATGCTTGCAATTGATGATTGGGAAGAAAaagcaaaattatatttccataCAAAAAATAGACAAACTATTACATCTCTCGAAGAATTTATTCGTGAAGCTGATAAAGTAGAAGCTTATCTACCAAGCTTAGATGTCCTTCAAGATACATTAAACAAGGCAAAAAATTGGACAAAAATAATGGAAGAGATACAAGCAAGAGATAACTTTCCATACTATAATACGCTagatgatttaattaaaaaaggtAGAAATATTCCACTGCACCTAGATGCTCTTCCGATCTTAGAATCTACTCTTTCACAAGCAAAAACCTGGAAAGAAAGGACAGCAAGAACATTCCTAAGGAAAAATTCACATTATACTTTAATGGAAGCTTTATCACCACGAATTGGCGTTGGTATACAAGCGTTAAAAGCTAAAAAGAGTAAGAATGAAGATTCTATAGGACCTGTATTTGTCTGTGATACAAAATTGGATGATTCCAATGATTCAGCTACTGTTGTAGCTGCGTTTAAATTAGCTGAACAACGCGAAATGGAAGCGATGCGAAATTTAAGGGAAAGAAACTTAATGAAAACCGAAATTGACGATTCAAGGTATTGTGTTTGTCGTCGACCAAGATTCGGGCTCATGCTTCAGTGTGAGCTTTGTAAGGATTGGTTTCACTcAAACTGTGTACCTTTACCAAAGACATCGTATAAAGGAAAATTTCCAATGTcaagagaaattaaatttttatgtcCATGTTGCTTACGTTCACGACGGCCACGGTTAGAAACTATTCTTGCACTTTTAGTTAGTCTTCAAAAAATTCCTATTCGTTTACCAGAAGGTGAAGCATTACAATGTTTAACGGAACGTGCAATGAATTGGCAGGATCGAGCTCGACAAGCACTAGCCACGGATGAAATTTCATCTGCACTGGCAAAATTGTCTGTATTATCACAAAAATTAGTGGAAGCAGCTGCAAGAGAAAAGACAGAAAAGATTATTAGCAGCGAACTGAAAAAGGCAGCAAATAATCCTGAATTACATCAGAGAGTACAAGCAATTGCCCCACTCAGTGGTGTGCATTCAGATGATAGTGTAGTTAGTATTGCGGATGATGATGACGACATTGTTACTATAGATGATGATGAACCAAGTTGTAGTACATTCAATAGTAACGAACATGCGTATTCCTATATATCAAAAATTCAACGTAAAACACAATCAAATGATGCAACGGAAATTGCGGTTGTACTTTCACAAACAGCAAGGTTACGTCTTGAAGAACTGATGATGGAAGGCGATTTATTAGAAGTTGCACTTGATGAAACACAACACATCTGGCGTATACTATGTCATACAAATAGTCCTAGTACGGTTCGAAAATATGCATCATACGAGGAAGTCCAAACTAACTTGAATCAGGATATAAAGGATGTAAAAAAGCgtggaaggaaaagaaaatccgacgaatttgaattattgaaaaaacttGGAAGAcaaaaaatggaagaaaagaatttaGCTAAGCGCAAAGCATtgcagaaagaaaaaaaatcagCCAGTTCTCTAGTTCCAATAAAGCGTGGACCTCGAAAGATGAAACgtaaagaaggagaagaaggcCCAAAGAAAAGGGGTGGTAACAGGAAAAAGACCAAACAGGATACTTCAGACGAAGAAGATGATTGTGCGGCTGTTAACTGCTTACGACCTAGCGGTAGGGAAGTTGATTGGGTACAGTGTGATGGTGGCTGTGAAGGTTGGTTCCACATGCATTGTGTTGGTTTAGATCGTACAGAAATTGCAGAGGAGGATGATTACATATGTAGTAATTGTAAAGAAGCAGAGCAAAACTCAACGTCAAGAGCGCCAGATCCCCTAGCTGAATCATTAGGCCTGGATGcacttctttccctttctcaATCTCAGGGATACCAGGGCACAGATAGTGAAGCAGACATTCAAGAAACCACATCCTTCGTCAAGACTTACTAG
- Protein Sequence
- MVSRFDTNFGCEDFFGTYRCIQDMACDRGDSDFEFVIPPEAPVFEPSIEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIDTVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLADIKIEPDSNVNEKKDRDYKPHGIISRQQIKPPPEKFSRRSKRFSGQEEKQEVSIKQEDCKEECDSDNDCKDGIRNKQYDDKDNSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGVKLIYEVDPLAKYICHNCGRGDNEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPILRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTDLCDCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKSDKIELSELKELLNEAESKKFPESELLTALTTAVQDAEKCASVAQQLLSNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQTEAEELESKEDDCDIEQLEKCIEFGDSICIELPQLTHLRQKLTQMQWLEEVKSVQEDPKSVHRDDLAKLIEKGMIMPPHLSIENTLSELQALMLAIDDWEEKAKLYFHTKNRQTITSLEEFIREADKVEAYLPSLDVLQDTLNKAKNWTKIMEEIQARDNFPYYNTLDDLIKKGRNIPLHLDALPILESTLSQAKTWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKSKNEDSIGPVFVCDTKLDDSNDSATVVAAFKLAEQREMEAMRNLRERNLMKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKFPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVVSIADDDDDIVTIDDDEPSCSTFNSNEHAYSYISKIQRKTQSNDATEIAVVLSQTARLRLEELMMEGDLLEVALDETQHIWRILCHTNSPSTVRKYASYEEVQTNLNQDIKDVKKRGRKRKSDEFELLKKLGRQKMEEKNLAKRKALQKEKKSASSLVPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTSRAPDPLAESLGLDALLSLSQSQGYQGTDSEADIQETTSFVKTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00873598;
- 90% Identity
- iTF_00141055;
- 80% Identity
- -