Bvan008367.1
Basic Information
- Insect
- Bombus vancouverensis
- Gene Symbol
- Atf2
- Assembly
- GCA_011952275.1
- Location
- NW:773331-776381[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6 1.8e+03 -1.7 0.3 37 48 251 267 239 287 0.49 2 2 1.4e-12 6.9e-10 38.1 8.0 2 65 316 379 315 379 0.95
Sequence Information
- Coding Sequence
- ATGGCACACAATGAGAAAATTTTTGCTTGCTCCTCATCCGGTTGCAATATGAGTTTTGCAAACGAGGACCAGTTATCAGTTCATAAGAAGAAACATGATATGATGTTAAATCTTGGAAATAGTTCCAAGAATGGCAGTTTTGTTGCAGATCAAACACCAACGCCAACACGTTTCATTCGAAACTGTGAGGAAGTTGGCCTATTCCAAGatttacaaaatgtaaatCCTTTCGAAGAAACTTTTAGGAGGGCAGTGGAGTCTGGGAACACTGGCACGCTGGCAGTACCAGAGGCTGGAATTACGGATGATACTTTGCATACACCGCACATATTTCCTCACATAGCCGACGTGCTGTCTACTAGCAGTCAAATGTTGTCAGAAAATTCAGTGCAAGAATGTGGAAGCATCTCGATCACTGAAAAGAGCACAGAAGAAAAAACTACCATTCATACTGAAGTTTGCAGTACAGTAAAACTCACTGAAACGGATGAACAGAACTTAATGAAGGAAAAGTTAACCATTGAACGAAATGTGACCTTAACAGAAAATGTTATCGATCAAGTTACACAAACGCCAATAATGCCGAAAGTTTTACAAGAACAACCTAGTCCACAATTATTGATTAACGGCGAGGAGGTACAACTACTACTAAAAACGGCAGATGGAAAATTAATGCAACTCTCAGCAATTCCTGTTTGCGATTCTGTTGGTACAACAAACGTGCAGTCATTGAAGCAACAAACGGTTGTCATAAAGACGGAACCACTTTTGCAATGTAATACAAGATTAGAGTCCAAGAATCCAACGGTTTCTACACTATCTTTAGCGAAAAtgaaattaaaacaaacaCTAACGAAAAGTTCACAAAATTTAAAACCGAATAGCAATTTCTCGAAAGATGagttaaataattcaaaaaagaatagaaataaaacgGTAGAAGATcaattgaaaaagaaagaaattctcgaacgtaatCGTGCTAGCGCGATGAGGGCAAGAGCTAAAAGAAAAGCGTGGATACAGCAGCTGGAAAGGACGGTTACCAATGTGAATGAGACCAACGTGGCTCTAAAAATGGAAATCAAAGTTCTACGAACGGAGGTTGCTAAATTAAAAACGCTTCTATTGGCTCACAAAGACTGTCCAATTACAAAGGCGATGCAAAAAGGAAATGGTATAATACTTGGTCCAAAAATAATATCCGTAAATTCTGATACTATAACAAACCCAGTTCCAGTAGCATCTGCGATAAAAAGGACGACCTTCTCTTCCATGGAAGTGCCTATTACACCGaagaaaaaattatctctGGCAGTCTCGAAAAACCCTATAATATTTCCAAAAGTAGATTGCAATACAAATTTATCAATTCCTAATGCTACGTTAATAAAAACAGTACCTACTTTAAAAATTATGGGTGTCGGTCAACTATTAacagaaaaggaagaaacgaagcaaatttttattgtacaaAATCCTATGAAGAAAGTGGAGAATCCTACTAGgcaaataattcaaattaaccCTAATTACGAGATTGATCAGAGCGCGTCAAAGACTAATGAACCGTGA
- Protein Sequence
- MAHNEKIFACSSSGCNMSFANEDQLSVHKKKHDMMLNLGNSSKNGSFVADQTPTPTRFIRNCEEVGLFQDLQNVNPFEETFRRAVESGNTGTLAVPEAGITDDTLHTPHIFPHIADVLSTSSQMLSENSVQECGSISITEKSTEEKTTIHTEVCSTVKLTETDEQNLMKEKLTIERNVTLTENVIDQVTQTPIMPKVLQEQPSPQLLINGEEVQLLLKTADGKLMQLSAIPVCDSVGTTNVQSLKQQTVVIKTEPLLQCNTRLESKNPTVSTLSLAKMKLKQTLTKSSQNLKPNSNFSKDELNNSKKNRNKTVEDQLKKKEILERNRASAMRARAKRKAWIQQLERTVTNVNETNVALKMEIKVLRTEVAKLKTLLLAHKDCPITKAMQKGNGIILGPKIISVNSDTITNPVPVASAIKRTTFSSMEVPITPKKKLSLAVSKNPIIFPKVDCNTNLSIPNATLIKTVPTLKIMGVGQLLTEKEETKQIFIVQNPMKKVENPTRQIIQINPNYEIDQSASKTNEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684574;
- 90% Identity
- iTF_00224319;
- 80% Identity
- iTF_00221698;