Bvan004404.1
Basic Information
- Insect
- Bombus vancouverensis
- Gene Symbol
- Atf3
- Assembly
- GCA_011952275.1
- Location
- NW:827257-856481[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-16 8.3e-14 50.6 13.6 2 63 131 192 130 194 0.96
Sequence Information
- Coding Sequence
- ATGTACAACCTGAATCTGAACGTGAACCCTAGTCCGACGGCTGCCGCGGGTCTTCTCGGTGTCGCGGCGGCCGAGGTCACACCAAGGACACCGGAAATCGTAAACTCCCTAATCGCCATGACCAATCCCTTCGAGGGTTACACGAACGAGAGGAGCAGGGACCGTACGGATTCGACTAGTAGCGGTGAGCCGAGCCCACCGAGCGTTCAGCACACCTGTAGTCAGCTCATTAAAGAAGGATTGAAGTTGACGCTGCAAACAAAAAGGAGAGCCAACGGGACCGGGGACGACACGAAAAAGAAGACAAAGAAGGAAGACGGGAGCGCAGACgacgaggaagaggaggaagcgagcaacaacaacaaccgCGGTGGACTAACTCCAGAGGACGAGGAAAGGCGCCGAAGGAGACGCGAGAGGAACAAGATAGCCGCTACCAAATGTCGATTGAAGAAACGCGAGAAGACAGTGACCTTGGTGCAGGAATCAGAGATCCTGGAAACGCAGAACCACGACCTGAAGTCGCAGATTCAGGAGCTGGAAACGCAGAGGCGCAGGCTAGTAGACATGTTGAGTCTCCATGGACCAACTTGCTTGAAGCAAGGTGGCACAGATACCTCGTACCAACAGTTTGCAGAACCTTTGCAGCTGCCCAGTTACCAGGAGAACTTTGTGCAGCCTCCGCCAGCATTGAATCAGCCTCAAAACTGTGTGACAGAATATCCGGTAAAGGTGGAAGAGTACGAGGGTGACTTTTATCGACAAGAGAGTCCCTTCGTGCCGACTTCAAACGCTGGTTGTACGGTTTAG
- Protein Sequence
- MYNLNLNVNPSPTAAAGLLGVAAAEVTPRTPEIVNSLIAMTNPFEGYTNERSRDRTDSTSSGEPSPPSVQHTCSQLIKEGLKLTLQTKRRANGTGDDTKKKTKKEDGSADDEEEEEASNNNNRGGLTPEDEERRRRRRERNKIAATKCRLKKREKTVTLVQESEILETQNHDLKSQIQELETQRRRLVDMLSLHGPTCLKQGGTDTSYQQFAEPLQLPSYQENFVQPPPALNQPQNCVTEYPVKVEEYEGDFYRQESPFVPTSNAGCTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00628850;
- 90% Identity
- iTF_00359965;
- 80% Identity
- iTF_00226344; iTF_00216137; iTF_00218858; iTF_00214157; iTF_00221006; iTF_00222286; iTF_00232368; iTF_00227025; iTF_00229106; iTF_00224307; iTF_00218164; iTF_00214773; iTF_00216821; iTF_00221686; iTF_00231063; iTF_00227704; iTF_00222939; iTF_00217500; iTF_00224988; iTF_00230460; iTF_00225661; iTF_00215454; iTF_00220222; iTF_00219552;