Basic Information

Insect: Bombus turneri
Gene Symbol: -
Assembly: GCA_014825825.1
Location: CM026117.1:1944413-1948351[-]

Transcription Factor Domain

TF Family: THAP
Domain: THAP domain
PFAM: PF05485
TF Group: Zinc-Coordinating Group
Description: The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2.2e-16 3.8e-13 50.1 1.2 1 87 4 80 4 80 0.83

2 5 0.77 1.3e+03 0.3 0.0 43 57 135 147 121 165 0.72

3 5 8.4 1.4e+04 -3.1 0.2 27 54 202 228 186 230 0.43

4 5 6.2 1.1e+04 -2.6 0.8 52 62 270 285 248 314 0.57

5 5 4.2 7.3e+03 -2.1 4.7 51 62 431 450 419 505 0.67

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2.2e-16	3.8e-13	50.1	1.2	1	87	4	80	4	80	0.83
2	5	0.77	1.3e+03	0.3	0.0	43	57	135	147	121	165	0.72
3	5	8.4	1.4e+04	-3.1	0.2	27	54	202	228	186	230	0.43
4	5	6.2	1.1e+04	-2.6	0.8	52	62	270	285	248	314	0.57
5	5	4.2	7.3e+03	-2.1	4.7	51	62	431	450	419	505	0.67

Sequence Information

Coding Sequence: ATGTTATCTTGCAAAGCACACGGTTGTCTTTCAAATGAAAATACGAAAATTGACGGTAAAGATATTTTACTATTTTGTTTTCCTCAAGAAATTGATCGAAGGAATGAATGGTTTAAGAACTGTCAATTGAATGAAAATACTGAAAGTGATAAGATGCTCTACCTCTGTGAATTGCACTTTGACAAAACATGTTTTACTGATTCAATGGAATTAATTCCTAATGCTGTCCCAACTATTTTTACCAAATTAGATGAAGGCCAAAGAAAACGTAAAATCGAAGATGAACCCAGATGTAGATCACCTACAATTCCCTCAATAAAGCAGAAAAAATTGGATAGCGATTCTCATAGCCCTGTGACTCCCCCACAAAGTCCTTGTACTCAATTAGCCAATAATGATAAAATGAATGGAAAAGAGAAAATGGACATATGTTCTGATCATGAGATGTCATTAAATGAATCTGTTGATATAAAACCAGAATTGTATAAGAAAGTGGCAATAGAAAAGAAGCTGTATCGTTTAACGATACAAATAGATAAAATATATGGGAAGCCATGTCCAAAATCAAAAAAACTCAGAATGCTGGCACAGCTAACAAGAAGAAGCCAACAATTCTCAGAGAATATGTATAATATTAATCAAGGAAATCAGTCTCTAGAAAAAGTTAGGAAAAAGGAAATTTGTAAAGAAGGTGGATGTAAATTGAAAAAGTCAATTTATGATTCAAAGCCAGCATTTCAATGCGAATACTGTGATAAATATTACATAATGAAACAAAGTGATGACCAAGTGGAGAGAAATATTTGTACCATGTGTCATCAAACTTTTTCATCTTCACAATCTTTATATCTTCATACTAAAACTCATTTTGTATGCGATATGTGCCAAACTGAATGTAGCTCACAAGTGACTTACGATAAGCATATAAGATTACATGTCAGTACCGATCCATTTCATCCATATAAGTGTCATCAGTGTACAGAAACGTTTGAACTAAAGGAAGATGTGAGGCAACATTATCTAATCGTTCATCCTACTATACAATTACAAAATGCAATTCTACAAGTGACTGCACCATGTTTAACACAGCAAATATCTCAACGAGAGCATCGTTGTATTAGTTGTAACATTACATTTAGAAATGAACAAGCCTACAGGAATCATATAAATTCCCATAAAAAGAAAGAGGGACTAAGGTGCAATATTGGTGATAGTACCAACAATGTATTTCCAGTACCTAATCCGTTAACTGGTAGCCAAATAGGTATTCTTCGAGCTGTAAAATTCAGTTGTAGAGTATGTTCAATGGAATTTGATAACGTCGGTGAAGTTGATAAACATACTAGAACTCATTTGGAAAAAGATAGTGAGGAAGAGCACAAGTGTAATATCTGTAAAAAACTATTTAAAACGAGCACACAACTCAACGAACATTTAAAGTACCACCTGTCCCGTGCACATTCTTGTCCCGTATGTTCCAAACCTTTTATTAACAGAACTACCTTAAAAATACATTTAAAAACGCACGGTGAATCGTAA
Protein Sequence: MLSCKAHGCLSNENTKIDGKDILLFCFPQEIDRRNEWFKNCQLNENTESDKMLYLCELHFDKTCFTDSMELIPNAVPTIFTKLDEGQRKRKIEDEPRCRSPTIPSIKQKKLDSDSHSPVTPPQSPCTQLANNDKMNGKEKMDICSDHEMSLNESVDIKPELYKKVAIEKKLYRLTIQIDKIYGKPCPKSKKLRMLAQLTRRSQQFSENMYNINQGNQSLEKVRKKEICKEGGCKLKKSIYDSKPAFQCEYCDKYYIMKQSDDQVERNICTMCHQTFSSSQSLYLHTKTHFVCDMCQTECSSQVTYDKHIRLHVSTDPFHPYKCHQCTETFELKEDVRQHYLIVHPTIQLQNAILQVTAPCLTQQISQREHRCISCNITFRNEQAYRNHINSHKKKEGLRCNIGDSTNNVFPVPNPLTGSQIGILRAVKFSCRVCSMEFDNVGEVDKHTRTHLEKDSEEEHKCNICKKLFKTSTQLNEHLKYHLSRAHSCPVCSKPFINRTTLKIHLKTHGES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01419040;
90% Identity: iTF_00227510;
80% Identity: iTF_00231557;