Bsup007694.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus superbus
Gene Symbol
Znf711
Assembly
GCA_014737385.1
Location
JACXIK010000019.1:7650498-7654273[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 8.9e-06 0.00061 19.8 3.6 2 23 285 306 284 306 0.97
2 15 8.6e-05 0.0059 16.7 3.6 1 23 312 335 312 335 0.97
3 15 4.1e-06 0.00028 20.9 1.4 2 23 416 437 415 437 0.97
4 15 2.2e-05 0.0015 18.6 2.0 1 23 443 465 443 465 0.97
5 15 0.00071 0.049 13.8 0.3 1 23 471 493 471 493 0.97
6 15 2.4e-07 1.6e-05 24.8 0.9 1 23 508 530 508 530 0.98
7 15 3.3e-05 0.0022 18.0 0.5 1 23 536 558 536 558 0.94
8 15 8.3e-06 0.00057 19.9 2.2 1 23 564 586 564 586 0.98
9 15 0.00069 0.047 13.9 0.2 1 23 592 614 592 614 0.99
10 15 3e-06 0.00021 21.3 0.3 1 23 620 643 620 643 0.94
11 15 1.6e-05 0.0011 19.1 1.3 1 23 649 671 649 671 0.98
12 15 0.00034 0.023 14.8 4.7 1 23 677 699 677 699 0.98
13 15 5.1e-06 0.00035 20.6 0.2 1 23 705 728 705 728 0.96
14 15 3.4e-06 0.00023 21.1 0.6 1 23 734 756 734 756 0.96
15 15 3e-06 0.00021 21.3 4.5 1 23 762 784 762 784 0.99

Sequence Information

Coding Sequence
ATGAATTCACTTTATAATACCAGAGACAAAAAATTGTATCATAGAGGACAAATTGATGTAATAGATATGCCGATACAATTAACTTGTAATTACAAGTATTTCTTTGTTTATGAGGATCAAGTATCCAGATTTGTTGTGTTGAAAGGTTTACATGGAAACACAGCAAATGAAGTAGCTGTGAAACTGTTAGACATATTGGCTATTATTGGAGCACCACAGGTCCTACAAAGCAGCAACGGACGCAAATTTGCTGAAGAAGTTGTGCAAGAGATACGTCTTTTGTGGAAAGATTTCATGATACTTCATGGAGAAATCACTGAGAACAGTGAACAGAGCAGAGATTTTAAAACCTTACTTGAATGTTGGGTAGAAAAAAATCCAACAAAAACATGGTATGAAGCTTTGAAACATATACAAATTTTTCAAAATTCAACATTTCGTTGTGAAAATGGAAAAATTCCATATGATATATTATTTGGGAAAAATGTACATGAAGAATTCCAAAAACGAAGTAATCTATTACATTTAAGAGATAATGTATTGACAGAAGAAGAATGGATTAGCCTCCTATCCGACAAAGAAGATGAAGTTAAGGACGAAAGTAAGGAAGATATGCAACAGCTTATAGATCAGCCCACCTTCGCAAACATTAGAGATATAGATAGTTTAAATGATTGTGAGAGTGAAGATTCTTGCGATGAAGTCAGGGGTGAATTTCAAAGAAGCACTCCTGGTTTTAATTTTGTGAATGTTAAGAGTGAACCTCTGAACATGCATACAGAAGATTTGGTATTTGAAGATGAATCGGGAATAGATGACAAGGCATCAAATGTGGAGAATCAAATCAATTTAAAATGTAAAATTTGCAAGAAACAATACATGAAACCCGGTCACTTAAGAAATCATATGAGAACACATACAAAGGGAAAAAAGTTCGAATGTAAACTATGCAACAAAACATTTCACGTTCTAAGTTTATATGAAAAACATATGAGGCAATCTCATAAACAAAATAAATTATCCAGTCTGACTAGAAGTAGAAGAAGTAAAGACTCTCAAGATGAAACAATATTAGACACGAAAGCACCTAAATTAAGAAATTTCTCAGAATTAAACACCAATGAAACACAATCAAATGAAGCAAATGATTGTACAAAGGCAACAAAGAATTTAAGTCTTCTCAAGGAAAGGAAGAAAATTGCTGCAGACAATCGTCCAATGAAAATAAATGGAGATCCAACTTTGGAATGTTCATATTGTAATCAAAAGTTTAACTTTCCCAGTGTATTAAAAAGGCATATGCGATCTCACACGAATGAAAGACCATACATTTGTTTAATTTGTAATAAGAGTTTTAAGCAGTTGGGCCATCTTAGCCAACATTCATTAACACATAAAGATTATCGGTCTTTCCATTGTGCGGTTTGCGGGGTAAAATTCGACTCTTTAGGTTCGCTGAAGATTCATGCTCAATCACATAAAGGACATTATATTTCAAAAACTAAAGAAACTTTCCGTTTATTCGAATGTGATAACTGTAAAAAGGTGTTTACCACCAAAAGCGTTTTGGAGCGACACATACTTACTCACTCTCATGAACGTCAATTCCCATGCATCATTTGTGGGAAAAGATTCAAACAAGCGGGACACGTGAAGTCTCACATGTTGGTACACACGGGAGAACGAAAATTCGAATGTTCGGTCTGCAAAAAGAGATTTAGCCTTTCGAATTCTTTGAAGAAACACATGTATGTTCACAATGGAGAAAAACCTTATCAGTGCGATGTATGTGGTGCACGATTTCTTGAAAAAAGAAATCTAAACGGGCATCTAATGACTCATACTAACGAACGTCCGTTCCGCTGTAAAATATGCGGAAAAAGATATACTTTAGCCGATACTTTGCGTCGGCATATAAGTGCTGCACATGAAGATGGACGCACTTATCAGTGTGAGATTTGTGCAAAGATGTTCAAGCAGCTTGCTCATCTGTCTGTTCATAAAAAAGTACACAATGACGAACGCCCATTTCAGTGTCATTTATGCGAGAAAAATTTTAAACATAAAAACGTGCTTAAATCTCACTTGGCCATTCATGCAAATGTAAGGCCATTTGAATGCGATGTATGTAAAGCCACGTTTGTAAGAAAAACAAATCTACAAACCCATATTGCATCAGCTCATATGAACGAAAGACCATATGTTTGTACTATTTGTGGAAAACGGTTCAAACAGATTAGTCACTTAAACGGTCATGTAGTAGTGCATAGCAATTTAATGCCTTATCAATGCGATTTCTGTGATCGACGATGTAATAGACTTGATAATCTAAAGAAACATATGCGTCTTCATACGAAAAATAAAGAGTAA
Protein Sequence
MNSLYNTRDKKLYHRGQIDVIDMPIQLTCNYKYFFVYEDQVSRFVVLKGLHGNTANEVAVKLLDILAIIGAPQVLQSSNGRKFAEEVVQEIRLLWKDFMILHGEITENSEQSRDFKTLLECWVEKNPTKTWYEALKHIQIFQNSTFRCENGKIPYDILFGKNVHEEFQKRSNLLHLRDNVLTEEEWISLLSDKEDEVKDESKEDMQQLIDQPTFANIRDIDSLNDCESEDSCDEVRGEFQRSTPGFNFVNVKSEPLNMHTEDLVFEDESGIDDKASNVENQINLKCKICKKQYMKPGHLRNHMRTHTKGKKFECKLCNKTFHVLSLYEKHMRQSHKQNKLSSLTRSRRSKDSQDETILDTKAPKLRNFSELNTNETQSNEANDCTKATKNLSLLKERKKIAADNRPMKINGDPTLECSYCNQKFNFPSVLKRHMRSHTNERPYICLICNKSFKQLGHLSQHSLTHKDYRSFHCAVCGVKFDSLGSLKIHAQSHKGHYISKTKETFRLFECDNCKKVFTTKSVLERHILTHSHERQFPCIICGKRFKQAGHVKSHMLVHTGERKFECSVCKKRFSLSNSLKKHMYVHNGEKPYQCDVCGARFLEKRNLNGHLMTHTNERPFRCKICGKRYTLADTLRRHISAAHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAIHANVRPFECDVCKATFVRKTNLQTHIASAHMNERPYVCTICGKRFKQISHLNGHVVVHSNLMPYQCDFCDRRCNRLDNLKKHMRLHTKNKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00684907;
90% Identity
iTF_00225376;
80% Identity
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