Basic Information

Insect: Bombus soroeensis
Gene Symbol: ZFX
Assembly: GCA_014737365.1
Location: JACXIL010000179.1:1085544-1087484[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 8.5e-06 0.00079 19.8 2.4 3 23 62 82 61 82 0.98

2 9 0.016 1.5 9.5 1.6 2 23 109 131 108 131 0.90

3 9 0.03 2.8 8.7 1.3 1 23 145 168 145 168 0.86

4 9 7e-07 6.5e-05 23.2 0.6 1 23 174 197 174 197 0.97

5 9 0.00021 0.019 15.5 5.2 3 23 204 225 202 225 0.95

6 9 1.4e-05 0.0013 19.2 0.7 1 23 230 253 230 253 0.98

7 9 9.1e-07 8.5e-05 22.9 2.2 2 23 260 281 259 281 0.97

8 9 3.3e-05 0.0031 18.0 1.3 1 23 287 309 287 309 0.97

9 9 1.5e-05 0.0014 19.1 0.5 1 23 315 337 315 337 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	8.5e-06	0.00079	19.8	2.4	3	23	62	82	61	82	0.98
2	9	0.016	1.5	9.5	1.6	2	23	109	131	108	131	0.90
3	9	0.03	2.8	8.7	1.3	1	23	145	168	145	168	0.86
4	9	7e-07	6.5e-05	23.2	0.6	1	23	174	197	174	197	0.97
5	9	0.00021	0.019	15.5	5.2	3	23	204	225	202	225	0.95
6	9	1.4e-05	0.0013	19.2	0.7	1	23	230	253	230	253	0.98
7	9	9.1e-07	8.5e-05	22.9	2.2	2	23	260	281	259	281	0.97
8	9	3.3e-05	0.0031	18.0	1.3	1	23	287	309	287	309	0.97
9	9	1.5e-05	0.0014	19.1	0.5	1	23	315	337	315	337	0.97

Sequence Information

Coding Sequence: ATGAACGTTGATTTACATTGTTGGAGTTTTGGAAAATGTGAAACAATTGGCATGCCATTTTACCTCAGGGACGGACTATCCCAATCAAATTCCATCTGCGTTTCAAAATTACCTACACCCGCCGGAGGAATCAAACAAGGAAGAAATTCATCTCAAGAGGACGACTATAAGATCCTACCAGCCTGTGATATCTGTCAAAAACAATTCAAAAAGAAGTACTTATTAAAAAGACACAAACTTACTCACGAAAATCAAAAGAAGAAGGACGTATCCTCAAAAGACGATTCTTTCATGGAACTAGTATCTCAAAAACAGGAAGCTTTATCATGCACAATCTGCGACTTCCGCTGCAACAAAAGATCCACAATGATCGCTCATTTGGTACAGAATCACGAAGATTCAGGCGAGAATAGATCAACCAGTAACAGGAAATTCGCCTGCATTATTTGTGGTCTTATCTGTTCTCGAAAGGAAACTTTGAGATCTCACTTTGTACGAAAACACACACAGCTTTATGAGTTCTCCTGTGAGCAATGCGGCAAGGAGTTCAAGATCAAAGGTGATTTAACGACTCACATGAGACTGAATCACAAAGAACCTCCTGTGATATGCGACGTTTGTGGCAAAACTTGTAAAAACAGTCACAGTCTGTATACTCATCAGAAACACGCTCACTATAAAGCGAAATACGAGTGTCCGGTGTGTCACAAGAGATTGGTGACCAAAGAGAACCTAGACCAGCACGTGTTGACTCAGCACGAGAAGAAAGAGAAGTCTGTCTGCGAAGAATGTGGGAAAACTTTCTTTGAAAATCACGATTTCAGGAAACACATGAGGATACACACCGGAGATAAACCGTATAGCTGTTCTGTTTGTGCCAGAGCGTTTACTACTCATAGCAGTTTGAGTCAGCATTTACTATTACACACAGGAGAAAGGATTTATGTCTGCGACGTATGTGGAAAATCGTTTGCTCAGAAGGCTGGTCTTATATGTCATAGAAAGATCCATTCTGGATCATTGCCTCCTCTTCCTGTCATGCATATCGATCACATCCTGAAAGACTTCATGAAGAAATGA
Protein Sequence: MNVDLHCWSFGKCETIGMPFYLRDGLSQSNSICVSKLPTPAGGIKQGRNSSQEDDYKILPACDICQKQFKKKYLLKRHKLTHENQKKKDVSSKDDSFMELVSQKQEALSCTICDFRCNKRSTMIAHLVQNHEDSGENRSTSNRKFACIICGLICSRKETLRSHFVRKHTQLYEFSCEQCGKEFKIKGDLTTHMRLNHKEPPVICDVCGKTCKNSHSLYTHQKHAHYKAKYECPVCHKRLVTKENLDQHVLTQHEKKEKSVCEECGKTFFENHDFRKHMRIHTGDKPYSCSVCARAFTTHSSLSQHLLLHTGERIYVCDVCGKSFAQKAGLICHRKIHSGSLPPLPVMHIDHILKDFMKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00233410;
90% Identity: iTF_00233410;
80% Identity: -