Bsor012283.1
Basic Information
- Insect
- Bombus soroeensis
- Gene Symbol
- -
- Assembly
- GCA_014737365.1
- Location
- JACXIL010000252.1:2299517-2300014[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00044 2.8 8.1 0.2 2 26 2 26 1 27 0.90 2 8 0.00033 2.1 8.5 0.3 2 26 28 52 27 53 0.90 3 8 0.00031 2 8.6 0.3 2 26 54 78 53 82 0.91 4 8 0.00057 3.6 7.7 0.3 2 26 93 117 92 119 0.89 5 8 0.00032 2 8.5 0.4 2 26 106 130 105 133 0.90 6 8 0.00032 2 8.5 0.4 2 26 119 143 118 146 0.90 7 8 0.00031 2 8.6 0.3 2 26 132 156 131 159 0.90 8 8 0.041 2.6e+02 1.8 0.1 2 20 145 163 144 165 0.84
Sequence Information
- Coding Sequence
- ATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGGAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATACTAAAGACGCAGAATAATTGTCGCGACATGTCGACTATTGTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAAGACGCAGAATATTTGTCGCGACATGTCGACTATTCTAAANGACGCAGAATAA
- Protein Sequence
- MSTILKTQNICRDMSTILKTENICRDMSTILKTQNICRDMSTILKTQNICRDMSTILKTQNICRDMSTILKTQNICRDMSTILKTQNNCRDMSTIVKTQNICRDMSTILKTQNICRDMSTILKTQNICRDMSTILKTQNICRDMSTILKTQNICRDMSTILXDAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -