Bsor005179.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus soroeensis
Gene Symbol
ct
Assembly
GCA_014737365.1
Location
JACXIL010000173.1:4202528-4361911[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.7e-28 5.5e-24 84.1 0.0 2 72 540 611 539 616 0.95
2 3 2.1e-32 1.3e-28 98.9 0.0 3 77 939 1014 937 1016 0.96
3 3 8.6e-31 5.5e-27 93.7 0.0 3 75 1170 1243 1168 1247 0.95

Sequence Information

Coding Sequence
ATGCAGGCCTCTGCGGAGGCCAACTCGCTGGACATTCAGGCCATGCAGTCCATGGACTGGCTGTTCAAGAAGGAGCGTATATACCTGCTCGCCCAGTTCTGGCAACAGAGGGCGACATTGGCGGAAAAGGAAGTTTCTGCATTGAAGGAGCAACTTGCCGCGGCAAATGATGGGAATTCGAAGACTGAGGGACATAAATTGTCTCAGACTCCACAGGCAAGTGATCAGCAGCAGGTACACGATGCCAGCAATCCCAGGAGGACGCCGAACACCAACCTGGAACAGGAACTGCAAGCGAAGGACAAAGAGATCAGTCAGCTGGTCGAGGAAGTGTCCAGGTTACAGCAGAGCCTGCAGCGTCTTCAAGAGACGAGCGCACAGGCGACGGCGCGACTCGAGGAAGAACTCGAGGCGCGCAGACAGCACATCAACAGACTAGAGAGCAAACTAGAACGACAGAGGGACTATGATGACCTAAAACGCGAGATAAACGTACTAAGGTCGGTCGATCTCTCACAGATACCAACCGGTGAACCTGGCAAGAGCTTGGAGCACCTTCTAATGGAACGCTCGAAGGCGCTTCAGCAAACCGAGAGCTTGAAGCCATCCAATACTCCGGACGCGCTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCAACCGCCTCACCCCACGGGGTCGGAGGTGTGCCGCCTTCGTCCCACGTGTCCTCCCAGCAACCACCGCCACCGCCCCCAGCAGCAGTCTCCCTACCTCCGCGTTCCACTCCGACACCATCTTCGGCCACCTCGACGACATCCAGCCTCCTCTTCCCACCTCCTCTGCAAAACGTCGAGACCTTCGGCTCCTTCCTCGGCGAAGAGATCGTCGCCAACTGGAGGCGGACGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTAAATCATCTTCCATCGCCAACGGATCCATCATCCAGCTCCAACACGCCAGCCAAATCGAACACCCCGTTAGGAACCACTCCATTGAGTTGCCTTGACGCCGAGAAGGCACCGACCCCGGTGTCCGGACACGAAACGCCCGCGCCACCTACCCCATCTTCTACCACCGCGTTGACATCACCGCCGAGCTTTCAACCGCCGACGTCGATGGTCGAGACAACCACCTCCTCCGCTTCCGTGAACGGTGGAAGCGTGACACCCGCCGTTTCAACGGCACCACCACCTAAGAGCCCAGCAGACCAGGAATCCTGCCACAATAACAACAACAGCCACCATCTAGCGAACAACAACATCGGAGGTCTGAGTGTGCTGGACACACTGAAGAGCCCGTTTCGGTTCGACGACAGGACGCATCCGTTTCGATTCAGCGACGAATTCGGTGCTGCTGGAATGGCTGGAAGATTGGGTGAATCGCTCATCCCAAAGGGCGACCCTATGGAGGCTAGGCTACAAGAGATGCTACGGTACAACATGGACAAGTACGCCTCGCAGAATCTAGACACGCTGCACATAGCCAGGAGGGTCAGGGAGCTGCTGTCGATACACAACATCGGTCAAAGGCTGTTTGCCAAGTATGTTCTCGGCCTCAGCCAAGGAACCGTCAGTGAGTTGCTAAGCAAACCGAAGCCTTGGGACAAGCTGACGGAAAAAGGTCGCGATAGCTACAGGAAGATGCACGGCTGGGCGTGCGACGAAAACGCTGTAATGCTGCTTAAATCTCTGATACCCAAGAAAGGCAAGGAGCAGGGAATGCCAGCGTTCGCGCGTGGTCCACAGGAAGGTGGTCCGCCGGAAATGAGTGACGAAAGGTTGGCGCATATCCTCTCGGAATCGGGCCACCTACAGATGAGGGGTGAGCACGAGGTGTCGAACGACGCGGACAGCAAAAGTCCGAATAGAATCGGTTGTCCGAGCCCATTTAACAAAGACAGGCTCGACAGTCAAAATAGGAGACTGAAGAAATACGAGAACGATGACATTCCGCAAGAAAAGGTAGTCAGGATTTACCAGGAGGAACTGGCTAAACTTATGGGAAGAAGGGTGGAGGATCTACGTGGACCCAGAGAGTTCTCTTCCAGCGGCACGCAAGGTGGTCTTCAGGGTATAGAGCGGACACAGGAGGACATCAGGTTGGCGCTTGACGCATATCACCGTGAACTACAGAAGCTGAACGCGACGCCAGGTCAGAATCCTTCGTTGACAGGACTGCCAGGACTACCTGGCCTGCCTGGCCTCTTGGCTCTACAGCAGCAAGCGCTTCAGCAACATCATCTCGCTACAAACGGTGGCGGTGTCCAAGATCTGAGTCTCGGTAAAGTCGATCCAAGAAATAAGATGATAAACGGAGTGTCCGAGGAGGAGAAGGAGAAGATAGAGGAAGCGATGAGACACGCAGGAAGTGCTTTCTCGTTGGTCAGGCCAAAACAGGAACCAACTACCGCACCCCAATCGACGCCAGGTGGATCTAGCGCGAGTTCACCGCTTGGCAACTCGATTCTTCCACCAGCAATGACACCTAGCGAGGAATTCTCGGGTGCAGCGGCGGCCAGTCCTCTTCAGAGGATGGCCTCTATCACGAATAGTCTGATCAGTCAACCGTCCACGCCTACCCACCACGCGGCCAACCAGAGGCCACTGAAAGCTGTACTTCCTCCCATTACCCAGCAACAGTTCGACTTGTACAATAACTTGAACACAGAGGACATTGTTAAGAGAGTGAAGGAGCAGTTGTCTCAATATTCGATCTCGCAACGTCTGTTCGGTGAATCCGTGTTGGGCCTGTCGCAGGGTTCCGTGTCAGATCTGCTGGCGCGTCCGAAGCCATGGCACATGCTGACGCAGAAAGGCCGCGAGCCCTTCATCAGGATGAAGATGTTCCTCGAGGACGATAACGCGGTGCACAAACTGGTCGCCAGCCAATACAAGATCGCGCCAGAGAAGTTGATGAGGACCGGCGGCTACGGTGGCCTGCCTCGTAAGTTTAACTCAGCCTGTGGAACACCAATGAAGCCAATGCCTCCGACGAAACTGGTACAGGAACAACTACAGAACGCAGCGAAGGCGCAAGCAGCGGCGCAAGCTGCGGCTCAGGCAGCAGCGCAACACCAGCAGGAGAATCAAATGCAGCTTGGTCCGCCACAACAGAGTCCGCAACATCCTCAACATCCACAGCCACCACCGCCGATGATGTTGACACCACCTGGACCTCATCATCCCCATCCTCAGCTCAGCATGCAGGAACTGCAGAAAAAGCAACAGCAGCAACAGCAACAGCAGATGAACCTTCATTCCCCGCATCACCAGATGACCCCATCACCTCTCCGTGGTCTTCATCCACATATCTCGCCGAGTGTATACGAAATGGCCGCGTTGACGCAAGATCTGGACACGCAGACGATCACGACGAAGATCAAAGAAGCGTTGCTGGCCAATAATATCGGCCAGAAGATCTTCGGCGAGGCTGTGCTCGGACTGTCGCAAGGCTCGGTCAGCGAATTACTCAGCAAACCAAAGCCATGGCATATGCTGAGCATAAAGGGCAGAGAACCTTTCATAAGAATGCAATTGTGGTTATCGGATGCGCACAACGTGGACCGGTTACAGGCGCTGAAAAACGAGCGTAGAGAGGCGAACAAAAGAAGGCGTAGCAGCGGACCAGGTCACGATAATAGTTCTGACACGTCGAGTAACGACACAGCCGAGTTCTATCACGCAGCGTCGCCCGGGCCTGGACCAGCCTCCGCTAAGAAGCAAAGAGTCCTCTTCTCCGAAGAACAGAAAGAAGCTCTGAGGCTTGCCTTCGCGCTCGATCCATATCCCAACGTGGCCACCATCGAGTTCCTCGCTGGTGAACTGGCGTTATCCTCACGGACGATAACCAATTGGTTTCACAATCATCGGATGAGACTGAAACAGCAGACGCCACACGGTCAGCCGGAGCCTCAATCGCCAAGAGAGCCTGGCCAGCCATTCGACCCAGTTCAGTTTAGATTGCTGTTAAACCAAAGACTGTTGGAGATCCAAAAAGAGAGACTAGGCTTGGGCAACGTGCCTCTGCCTTACACACCGTACTTCAACCCTAATCTGGCTGCCTTAGTAGGGAACGCGCTCAAGGAACAGTGTTCCGGTCTGGATCTTTCTATGAACGCTCTGAAGAGGGAGCCAAACCAAGAATTCGAAGACGAGGATGTGGAAGACGCTATGAGCAATCTCGGTAGCGAGGATTCGGAAGGATCTGCGGGGAGTATAAAGAGAGAACCGGCGGAAACGCCTACAGCACCGGCCACTGTCAGATCGAACAGAAGAAAACCTGCAGCGCCGCAGTGGGTGAATCCTGAGTGGCAGGAACCAGCCAGAACAGGGGACGAAGTGATCATCAATGGTGTCTGCGTGATGCAAACGGATGATTACGGCGTTAAGAGAGAAGCCGAAGAAACGATTAGGGTAGAACCGACTCCAGTACAGGACAGATACGAGGAAGACGCGCAAAGTGACGTGTCTTCTGTTTCTGGAAACAACGGTCAGGACCGAGATAGCCCTCTGCCCAGTCCAAAGTCTGGACAGAACAGTCCGGTGACCTCACCCAGGCCACCCTCGACGCAACAGACGCAGCAGTCCACCGATGAGAGCCCCAAGGACAGCGTGGTGAAACACGAACCCGAGGAAACGTGGGATTATTAA
Protein Sequence
MQASAEANSLDIQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVSALKEQLAAANDGNSKTEGHKLSQTPQASDQQQVHDASNPRRTPNTNLEQELQAKDKEISQLVEEVSRLQQSLQRLQETSAQATARLEEELEARRQHINRLESKLERQRDYDDLKREINVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQTESLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPSSHVSSQQPPPPPPAAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNHLPSPTDPSSSSNTPAKSNTPLGTTPLSCLDAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETTTSSASVNGGSVTPAVSTAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFSDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKGKEQGMPAFARGPQEGGPPEMSDERLAHILSESGHLQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRGPREFSSSGTQGGLQGIERTQEDIRLALDAYHRELQKLNATPGQNPSLTGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKVDPRNKMINGVSEEEKEKIEEAMRHAGSAFSLVRPKQEPTTAPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHAANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHPQLSMQELQKKQQQQQQQQMNLHSPHHQMTPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYTPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPAETPTAPATVRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGQDRDSPLPSPKSGQNSPVTSPRPPSTQQTQQSTDESPKDSVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00729955;
90% Identity
iTF_00982081;
80% Identity
iTF_00229243;