Bson003702.1
Basic Information
- Insect
- Bombus sonorus
- Gene Symbol
- grn
- Assembly
- GCA_029958995.1
- Location
- JARWAU010000003.1:19810057-19815422[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.1 4e+02 1.3 1.9 1 27 546 570 546 574 0.84 2 2 8.6e-18 3.3e-14 52.7 7.5 1 35 602 635 602 636 0.97
Sequence Information
- Coding Sequence
- ATGAAGGAGACGTTGTCGAAGCAGGAGGTTAAACGCGAATGGGAGGACGGTCGAGCGGAGGAGGATTCGCCGCGAGTTGCAACGGCGGACGAGCGATCCGTCGAGAGTTCCAGGTCGGTGATCACCGCGAGAAGGCACGTGCGAACCATTACCACGGCCGGACACATCACCGAGACCGTGGCCGAACCCGAAGCAGACTCGCAACACCATCGTCGATCGGTCGACGATCAAGCTCAGCAATGCAGATCGCGCTCGTATCAGGAcgagcaacagcaacaacaacagcaacatcaACAGGACCAAGGCTGCAAACTGAGTATCCTGCAAATTGCTCATACCGAGGCGGAGatgcaacaacagcagcagcagcacgcTCGTTCTCGCGAGCAGTCTCTCGTTTACATGACCAGCAACGGCCAAGAGGTGCGGGTGCAGGTGTCGGAAACGGTGGATCCGTCCGTGCTGACGGTGAAGGACACGGTCAGGTACGAGACGCCGGAGCCGGAGAGAACGGACGCGGATCGCATGTACGCTGGATACTCGGCGGACGGACAGCAGCAACAGATACGAAGGGACAATCACGCGATCGCGATCCAGGCGGTGCAGGAGAGACGCGTGGTTCAGTCGGCCGGTGGCAATCAGAGGTACAGTCCGCGGGAGGGAGGCGGCCAGTCGAGCGGTGGAAACGGATCGACGCCGGTCGCAAGGTCGTATCATCAGGGTTCGTCGCCGGTATTGGTCGCGACCAGCGAGGAATACGAGGGCGGCGGTGGCATGACCGAGACGAACGTCGGGGTGCAGCTCGATTCACCCGCGCCACCGTCTTACTCTCCGCCGATGGGCGGCGACGGCGGTATCCGCGCGACCTCGGCTTCCGTGGGTCACCAGCAACCGGGCCAACAGCATCAAATGGTCACGGGATACGTGAACACCGGCGGGGTGAGCATCAAGTACGAGACCGAGGCGGCGAACGTggccgcgacgaacgcggtggtGGCAGCAGCGGCTGCGGCCGTCGGTGCCACGGTCCCGGTCGACGGTATCAAGGTGTCGAGCACGTACACCACGCTCGAGACGGTGCCGATTCCTCCGTCGCAAGCCGTCCAGTACCAGCAGTACATATCCGCCAGCGAGACGTTTCAACAGGCACCGACCTACAGCTACACGAAACCCGGCGATCAAGTGATCTTCGCGTATCCGTCTCAACTGTCGTCGCGAGTGCCCGGGGTGGAGTCCCCTGGAAGCGCGTACATGAAGGGCGACCCGACGCTGGCGTCCTCGCTGGGAGGGTCGCGCGGCGTGCCGCCTCTTCACTACGAGCAGCCAGGCTCGCCGGGATCTCAGGTGACGCTGTACGGGACCGGGGCCGGATCGTACTCTTACACGAAGCCAAACACCGCCAGCGAGTACTGGTCGGCCGCCGGAACTCCATCTCCGCCCGCGTTCGATTGCGTGCCGAGCTATCAGAACGTGGCGGCGATCTCCGTCGGTGACGCGGCCAACATTCAGCTGTACTCGGGAGGAGCGTACAGCGTGTCGACCGGAAGCACCACGGCTCCGTCCCCGTGGCCGAATCTGCCGTTGACCAACGAGGACGGTTTCGACGGAACCATCATGACCGCGGACCCGAAGGAGTGCTTCGGTTGCGGCAATCCATCGACCAGCTGGAAGAGAGACGAAACCGGCCGTTTCTACTGTCAGAGTTGCATCTACAAGATGAACGGAATAAACAGGTCGTCCATGAGATGCGGCAAACCCAAACAAACCGTCACCACGGCCGGTGTACGAAGGACGGGGGTTCAGTGCGCCAATTGCAGGACCAGCAACACGACCTTGTGGCGGCGGAACAACAACGGCGAGCCGGTGTGCAACGCTTGCGGCCTCTACTACAAGCTACACAACGTGAACAGGCCACTTAGCATGAAGAAGGAGGGAATACAGACGAGGAAAAGGAAGCCGAAGAATCATTCGGGAATGAGCGGAAACTTGGCGGGACCGAGCGGCATGCACAAGACCGAGATTAAGTCTAACTTACTCGTGGACTCGCTGCAGTTGAACGTGTATGGGAGCGGTGGTAGTGGTAACGGGGGTGGGATTGTGGCCGATACGGAGGCGAAGCAAGAGGCCGAGAGCGAGGCAGCGACCGGGGCAGGTACGGATGGCGGTGGTTCCGGTACAGAGACCGGGAATCGGGCGGAGAACGAGAACGGAAGCGGTAACGCGTCGGGTGGGAACGGAGGATCCGACGAACGTCGTCCACCCCTAGGTACACCGACTACGGGGCGATCGAGGCACGCGAGCCACGCGCACTCGCCCCTCGCTTTACCTACCGCCGCAGTTCTCAATCGACAGACTACCCTTACcgTGCCACCGCTAGAGCCAATCGTTAGCCAAACCGGTGGCGATCTCCTCTCGGTTATAACTTCCACCACGGCTATCCACGCCGAAAGGTCGTAA
- Protein Sequence
- MKETLSKQEVKREWEDGRAEEDSPRVATADERSVESSRSVITARRHVRTITTAGHITETVAEPEADSQHHRRSVDDQAQQCRSRSYQDEQQQQQQQHQQDQGCKLSILQIAHTEAEMQQQQQQHARSREQSLVYMTSNGQEVRVQVSETVDPSVLTVKDTVRYETPEPERTDADRMYAGYSADGQQQQIRRDNHAIAIQAVQERRVVQSAGGNQRYSPREGGGQSSGGNGSTPVARSYHQGSSPVLVATSEEYEGGGGMTETNVGVQLDSPAPPSYSPPMGGDGGIRATSASVGHQQPGQQHQMVTGYVNTGGVSIKYETEAANVAATNAVVAAAAAAVGATVPVDGIKVSSTYTTLETVPIPPSQAVQYQQYISASETFQQAPTYSYTKPGDQVIFAYPSQLSSRVPGVESPGSAYMKGDPTLASSLGGSRGVPPLHYEQPGSPGSQVTLYGTGAGSYSYTKPNTASEYWSAAGTPSPPAFDCVPSYQNVAAISVGDAANIQLYSGGAYSVSTGSTTAPSPWPNLPLTNEDGFDGTIMTADPKECFGCGNPSTSWKRDETGRFYCQSCIYKMNGINRSSMRCGKPKQTVTTAGVRRTGVQCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKEGIQTRKRKPKNHSGMSGNLAGPSGMHKTEIKSNLLVDSLQLNVYGSGGSGNGGGIVADTEAKQEAESEAATGAGTDGGGSGTETGNRAENENGSGNASGGNGGSDERRPPLGTPTTGRSRHASHAHSPLALPTAAVLNRQTTLTVPPLEPIVSQTGGDLLSVITSTTAIHAERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00233587;
- 90% Identity
- iTF_00226274;
- 80% Identity
- -