Bson009245.1
Basic Information
- Insect
- Bombus sonorus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_029958995.1
- Location
- JARWAU010000008.1:17357359-17359911[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.097 87 3.9 0.7 3 18 168 183 167 230 0.87 2 5 2.7e-12 2.4e-09 37.7 1.9 1 45 238 284 238 285 0.96 3 5 2.1e-07 0.00019 22.1 0.5 4 42 294 336 292 340 0.97 4 5 4.6e-13 4.1e-10 40.2 0.0 1 45 346 391 346 392 0.97 5 5 3.1e-10 2.8e-07 31.1 0.1 3 42 401 440 400 443 0.97
Sequence Information
- Coding Sequence
- ATGAACACGGTACTCAACGAAGGTGATGAAAATAATGATCTAGTCGAGATGTTGTTAGAAAGTATATTTCCCGAATGTACAGATGGAAATCATTTTGAGAATAATTACGAAATAAATGATATTGAATTAATCGATAACTTAAAACAAGAATCTATTAAAGATCGAATAAGTGTACAAAAAGAATGTCAAACCAAAGATGACTTTACGGAATGTAGTATCGAAAATTGCTATGATATGTTAGATTATAACAAACAGATAATCTCTTCTTTAATGGATTTAAAAAACAACATAATTCTAGCTCTTACAAAATGTCAAAAAAAATTAGCAGTGAtagaatgtaatttaaaaaaaaatatagctaaagatacaaaaatttcaatttgcaaTGCCGGTATGCCTTATTTTaaggataaaaattatttttttgcttCCAATAATGAAGATGAAATATTGAAGGAAAGCTATAAAGAATTACAGCTCAAAAATCTTCCCAAAATTTCTGCATGgactaaaaaggaaagagaTGTGCTTTTAGATGCGGTAAAAGAAGAAGCTGAAGGGGGAAAGGAATGCAAAGACGGGGAAAAGAAATTTTCGTTACAACAAAAAGAATTTGATTGGTTTAAAATATCATCTAATTATTTTGAAGATGTTCATTCTCCGTTTGATTGTCGTATCATGTGGAATGTTTTTCTTCATCCTAACATCAACAGGAAGCATTGGACGAAGTCAGAAATTACTAAACTCAGGAGAATAGTAAAAAAGTATAAATTTCAAAACTGGGACAAAATTGCTGAAGAATTGAATACAAATCGTAGTGCGTATCAATGTCTTATCAGATATAATACAAGAAAAAGATTACCTAAAGTCCATTGCATTTGGGAAAATGAAGAAGATAAAAGACTTTTGAAACTagtagaaatatttcaaattggtGACTTTATTCCTTGGGGCAATGTTACGAGTTGGATGCAAAATAGAACTAAGCAGCAAGTTTATTTTCGATGGTCATACAGCTTATCACCATATTTAACTAAAGGCAGATTCACTAAAACTGAGGACGATATCTTGAAAGATGCTGTTACTAAATATGGTACTAACTTTCGTAAAATATCAGCTGCATTAATGCCTAATAGATCTACCATTCAACTTCATGATCGTTATCAAACGTTAACCATTAACCAAATTGAAAGTTGGACTTCGTGGACGCTTGAAGAAGATACAAAGTTACTTCATCTTTTTCAGTGCATTGGTCCAAATTGGTCTGTAATAGCTAAAAACTTTTCGTGCAAAACTAGGACTCAATTAAGACACAGATACACAGCtttgcaaaaatatattaagagagGTGTTTCTATACTTGAACTGCATAAATATCAATTACACAATGGAGTACAACATTCAGAAAATGAAAACAaggaacaaaaaaagaaagaattttgtaaaaatatcttCAAACCTAATGATAGTATCATCAATGAAGATCATGATAATAATATTACGAATATAGATCAAGAATTAATTGactattttcataaaaaatataaagcagAACAATTGATACATAGGCGGGAACTTCATAACGTGGAAAAGTTGGAATGTAGTACAATaagtttgtataatattttacaagcaTTGAATGCCAAACGTTGTATATCTAACAACattattgataaaaaattaagcAACAGAGATCAACAGCTTTTGCATTCATTAAGGgaatatataaaactaaaaaacGATAAGAAAAAGTACTTTCAAATTGTAGAGGAGTATAAATCACGCATGTTTAAACGCAATGAGTCTGAACAAGATTCTTGCTTTTTACCTCCATGTCCATCGCAGATAAAATTGgagaaattaaagaaatgtaTCGATTATGATATAGATAGAAGCAATAAATTTGTATTCGAACTACCTACAGACTTTAATACATCAGAGCTTATAGTTCCTTACATCAGTGCTGAACAAGAAttacaatttcaaaaatttgcTCGTTCCTTTCAAGTCAATAATTCAAAATGCAGTGAATCAGCCTTTGAAACTCGAAACTGTCctacatttttaacaaaattattattacaacGTCGAAGTCGTACCAATAATAGCAACGATAGAAACAATTCAACTGacaaaacatttaaaaaattggaaTCAGTCGTTCGATTCGACATTGGCACCACTGCATCTCATGAAAATGACGATGGTTACAAATCTCAGCATGTGGAATTTCAAAGCAAATGTCTATCTAACTGTACTACAGAAATTACTCAAAACCATGATACATCTATTATGTATGCTAGCTATGCAACTTTGATAAGTTTCAAAAACTTGACATATTTGAAACGATTAAATGAAAAGTATAGTATTCttgatgaatattttataccATCAAACGAATTACAAAAAGCATTTAATTTATTGGAAACACGTttagaacaattatttaagtacCCATTAGGCCTGTCAAATATCTTATTGCCACAAGTTTATGTAGAGGATACATTTCTGTTCGAAGATATTCCACCGAAAAAGAGACATCTCAAATATTAG
- Protein Sequence
- MNTVLNEGDENNDLVEMLLESIFPECTDGNHFENNYEINDIELIDNLKQESIKDRISVQKECQTKDDFTECSIENCYDMLDYNKQIISSLMDLKNNIILALTKCQKKLAVIECNLKKNIAKDTKISICNAGMPYFKDKNYFFASNNEDEILKESYKELQLKNLPKISAWTKKERDVLLDAVKEEAEGGKECKDGEKKFSLQQKEFDWFKISSNYFEDVHSPFDCRIMWNVFLHPNINRKHWTKSEITKLRRIVKKYKFQNWDKIAEELNTNRSAYQCLIRYNTRKRLPKVHCIWENEEDKRLLKLVEIFQIGDFIPWGNVTSWMQNRTKQQVYFRWSYSLSPYLTKGRFTKTEDDILKDAVTKYGTNFRKISAALMPNRSTIQLHDRYQTLTINQIESWTSWTLEEDTKLLHLFQCIGPNWSVIAKNFSCKTRTQLRHRYTALQKYIKRGVSILELHKYQLHNGVQHSENENKEQKKKEFCKNIFKPNDSIINEDHDNNITNIDQELIDYFHKKYKAEQLIHRRELHNVEKLECSTISLYNILQALNAKRCISNNIIDKKLSNRDQQLLHSLREYIKLKNDKKKYFQIVEEYKSRMFKRNESEQDSCFLPPCPSQIKLEKLKKCIDYDIDRSNKFVFELPTDFNTSELIVPYISAEQELQFQKFARSFQVNNSKCSESAFETRNCPTFLTKLLLQRRSRTNNSNDRNNSTDKTFKKLESVVRFDIGTTASHENDDGYKSQHVEFQSKCLSNCTTEITQNHDTSIMYASYATLISFKNLTYLKRLNEKYSILDEYFIPSNELQKAFNLLETRLEQLFKYPLGLSNILLPQVYVEDTFLFEDIPPKKRHLKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219036;
- 90% Identity
- iTF_00219720;
- 80% Identity
- -